Globodera rostonchiensis: 362 partial CDSs (362 contigs; 347 clusters; 56538 codons) AMINO ACID FREQUENCIES ====================== F Phe 2665 4.71 % S Ser 3369 5.95 % T Thr 2760 4.88 % N Asn 2362 4.17 % K Lys 4015 7.1 % * stop 0 0 % E Glu 3625 6.41 % Y Tyr 1800 3.18 % V Val 3640 6.43 % Q Gln 2345 4.14 % M Met 1324 2.34 % C Cys 1065 1.88 % L Leu 5023 8.88 % A Ala 4256 7.52 % W Typ 669 1.18 % P Pro 2496 4.41 % H His 1263 2.23 % D Asp 3022 5.34 % I Ile 3215 5.68 % R Arg 3462 6.12 % G Gly 4162 7.36 % CODON USAGE FREQUENCIES ======================= F Phe TTT 1180 2.08 % F Phe TTC 1485 2.62 % S Ser AGT 359 0.63 % S Ser AGC 613 1.08 % S Ser TCG 823 1.45 % S Ser TCA 371 0.65 % S Ser TCC 771 1.36 % S Ser TCT 432 0.76 % T Thr ACA 496 0.87 % T Thr ACC 849 1.5 % T Thr ACG 803 1.42 % T Thr ACT 612 1.08 % N Asn AAC 1463 2.58 % N Asn AAT 899 1.59 % K Lys AAG 2204 3.89 % K Lys AAA 1811 3.2 % * stop TGA 0 0 % * stop TAA 0 0 % * stop TAG 0 0 % E Glu GAG 2045 3.61 % E Glu GAA 1580 2.79 % Y Tyr TAC 1197 2.11 % Y Tyr TAT 603 1.06 % V Val GTG 1547 2.73 % V Val GTT 857 1.51 % V Val GTA 181 0.32 % V Val GTC 1055 1.86 % Q Gln CAG 1274 2.25 % Q Gln CAA 1071 1.89 % M Met ATG 1324 2.34 % C Cys TGT 438 0.77 % C Cys TGC 627 1.1 % L Leu CTG 1411 2.49 % L Leu CTC 836 1.47 % L Leu TTG 1624 2.87 % L Leu CTT 818 1.44 % L Leu TTA 191 0.33 % L Leu CTA 143 0.25 % A Ala GCC 1468 2.59 % A Ala GCA 802 1.41 % A Ala GCG 1250 2.21 % A Ala GCT 736 1.3 % W Typ TGG 669 1.18 % P Pro CCG 1100 1.94 % P Pro CCA 508 0.89 % P Pro CCC 545 0.96 % P Pro CCT 343 0.6 % H His CAC 722 1.27 % H His CAT 541 0.95 % D Asp GAC 2033 3.59 % D Asp GAT 989 1.74 % I Ile ATC 1364 2.41 % I Ile ATT 1606 2.84 % I Ile ATA 245 0.43 % R Arg CGA 529 0.93 % R Arg AGA 280 0.49 % R Arg CGC 1158 2.04 % R Arg AGG 186 0.32 % R Arg CGT 877 1.55 % R Arg CGG 432 0.76 % G Gly GGA 1030 1.82 % G Gly GGT 651 1.15 % G Gly GGG 675 1.19 % G Gly GGC 1806 3.19 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).