Meloidogyne arenaria: 1483 contigs; 176816 codons AMINO ACID FREQUENCIES ====================== A Ala 10069 5.69 % C Cys 3502 1.98 % D Asp 8876 5.01 % E Glu 12192 6.89 % F Phe 9412 5.32 % G Gly 10064 5.69 % H His 3819 2.15 % * stop 86 0.04 % I Ile 12183 6.89 % K Lys 12963 7.33 % L Leu 17118 9.68 % M Met 4095 2.31 % N Asn 9756 5.51 % P Pro 7305 4.13 % Q Gln 7532 4.25 % R Arg 9171 5.18 % S Ser 12353 6.98 % T Thr 8837 4.99 % V Val 9899 5.59 % W Typ 2002 1.13 % Y Tyr 5582 3.15 % CODON USAGE FREQUENCIES ======================= A Ala GCA 3301 1.86 % A Ala GCC 1169 0.66 % A Ala GCG 709 0.4 % A Ala GCT 4890 2.76 % C Cys TGT 2580 1.45 % C Cys TGC 922 0.52 % D Asp GAC 2201 1.24 % D Asp GAT 6675 3.77 % E Glu GAA 9286 5.25 % E Glu GAG 2906 1.64 % F Phe TTC 1969 1.11 % F Phe TTT 7443 4.2 % G Gly GGA 4609 2.6 % G Gly GGC 1380 0.78 % G Gly GGG 1312 0.74 % G Gly GGT 2763 1.56 % H His CAC 948 0.53 % H His CAT 2871 1.62 % * stop TAA 55 0.03 % * stop TAG 9 0 % * stop TGA 22 0.01 % I Ile ATA 2784 1.57 % I Ile ATC 1370 0.77 % I Ile ATT 8029 4.54 % K Lys AAA 9491 5.36 % K Lys AAG 3472 1.96 % L Leu CTA 1081 0.61 % L Leu CTC 1023 0.57 % L Leu CTG 798 0.45 % L Leu CTT 4317 2.44 % L Leu TTA 5537 3.13 % L Leu TTG 4362 2.46 % M Met ATG 4095 2.31 % N Asn AAC 1937 1.09 % N Asn AAT 7819 4.42 % P Pro CCA 3018 1.7 % P Pro CCC 645 0.36 % P Pro CCG 784 0.44 % P Pro CCT 2858 1.61 % Q Gln CAA 6041 3.41 % Q Gln CAG 1491 0.84 % R Arg AGA 2676 1.51 % R Arg CGA 1586 0.89 % R Arg AGG 804 0.45 % R Arg CGC 781 0.44 % R Arg CGG 448 0.25 % R Arg CGT 2876 1.62 % S Ser AGC 1033 0.58 % S Ser TCA 2978 1.68 % S Ser TCC 970 0.54 % S Ser AGT 2283 1.29 % S Ser TCG 972 0.54 % S Ser TCT 4117 2.32 % T Thr ACA 3635 2.05 % T Thr ACC 791 0.44 % T Thr ACG 756 0.42 % T Thr ACT 3655 2.06 % V Val GTA 1736 0.98 % V Val GTC 1175 0.66 % V Val GTG 1154 0.65 % V Val GTT 5834 3.29 % W Typ TGG 2002 1.13 % Y Tyr TAC 1168 0.66 % Y Tyr TAT 4414 2.49 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).