Meloidogyne hapla: 3507 contigs; 407985 codons AMINO ACID FREQUENCIES ====================== A Ala 22749 5.57 % C Cys 8174 2 % D Asp 19863 4.86 % E Glu 27589 6.76 % F Phe 21612 5.29 % G Gly 22693 5.56 % H His 9003 2.2 % * stop 181 0.04 % I Ile 28528 6.99 % K Lys 29876 7.32 % L Leu 38589 9.45 % M Met 9532 2.33 % N Asn 23509 5.76 % P Pro 17440 4.27 % Q Gln 17739 4.34 % R Arg 21409 5.24 % S Ser 29702 7.28 % T Thr 20194 4.94 % V Val 21917 5.37 % W Typ 4746 1.16 % Y Tyr 12940 3.17 % CODON USAGE FREQUENCIES ======================= A Ala GCA 7941 1.94 % A Ala GCC 2600 0.63 % A Ala GCG 1652 0.4 % A Ala GCT 10556 2.58 % C Cys TGT 6077 1.48 % C Cys TGC 2097 0.51 % D Asp GAC 4807 1.17 % D Asp GAT 15056 3.69 % E Glu GAA 21130 5.17 % E Glu GAG 6459 1.58 % F Phe TTC 4599 1.12 % F Phe TTT 17013 4.17 % G Gly GGA 10392 2.54 % G Gly GGC 3171 0.77 % G Gly GGG 2270 0.55 % G Gly GGT 6860 1.68 % H His CAC 2285 0.56 % H His CAT 6718 1.64 % * stop TAA 130 0.03 % * stop TAG 20 0 % * stop TGA 31 0 % I Ile ATA 6696 1.64 % I Ile ATC 3144 0.77 % I Ile ATT 18688 4.58 % K Lys AAA 22330 5.47 % K Lys AAG 7546 1.84 % L Leu CTA 2433 0.59 % L Leu CTC 2468 0.6 % L Leu CTG 1848 0.45 % L Leu CTT 9764 2.39 % L Leu TTA 12908 3.16 % L Leu TTG 9168 2.24 % M Met ATG 9532 2.33 % N Asn AAC 4428 1.08 % N Asn AAT 19081 4.67 % P Pro CCA 7817 1.91 % P Pro CCC 1370 0.33 % P Pro CCG 1477 0.36 % P Pro CCT 6776 1.66 % Q Gln CAA 14344 3.51 % Q Gln CAG 3395 0.83 % R Arg AGA 6421 1.57 % R Arg CGA 3586 0.87 % R Arg AGG 1905 0.46 % R Arg CGC 1876 0.45 % R Arg CGG 964 0.23 % R Arg CGT 6657 1.63 % S Ser AGC 2350 0.57 % S Ser TCA 8013 1.96 % S Ser TCC 2010 0.49 % S Ser AGT 5382 1.31 % S Ser TCG 1838 0.45 % S Ser TCT 10109 2.47 % T Thr ACA 8552 2.09 % T Thr ACC 1833 0.44 % T Thr ACG 1709 0.41 % T Thr ACT 8100 1.98 % V Val GTA 3722 0.91 % V Val GTC 2504 0.61 % V Val GTG 2837 0.69 % V Val GTT 12854 3.15 % W Typ TGG 4746 1.16 % Y Tyr TAC 2769 0.67 % Y Tyr TAT 10171 2.49 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).