Meloidogyne incognita: 3214 contigs: 366435 codons AMINO ACID FREQUENCIES ====================== A Ala 21050 5.74 % C Cys 7328 1.99 % D Asp 17627 4.81 % E Glu 24640 6.72 % F Phe 18687 5.09 % G Gly 20413 5.57 % H His 7978 2.17 % * stop 126 0.03 % I Ile 23849 6.5 % K Lys 26575 7.25 % L Leu 34549 9.42 % M Met 8593 2.34 % N Asn 20562 5.61 % P Pro 16614 4.53 % Q Gln 16926 4.61 % R Arg 19486 5.31 % S Ser 27606 7.53 % T Thr 19046 5.19 % V Val 19706 5.37 % W Typ 4055 1.1 % Y Tyr 11019 3 % CODON USAGE FREQUENCIES ======================= A Ala GCA 6784 1.85 % A Ala GCC 2804 0.76 % A Ala GCG 1707 0.46 % A Ala GCT 9755 2.66 % C Cys TGT 5231 1.42 % C Cys TGC 2097 0.57 % D Asp GAC 4665 1.27 % D Asp GAT 12962 3.53 % E Glu GAA 18549 5.06 % E Glu GAG 6091 1.66 % F Phe TTC 4534 1.23 % F Phe TTT 14153 3.86 % G Gly GGA 9084 2.47 % G Gly GGC 3015 0.82 % G Gly GGG 2789 0.76 % G Gly GGT 5525 1.5 % H His CAC 2241 0.61 % H His CAT 5737 1.56 % * stop TAA 80 0.02 % * stop TAG 16 0 % * stop TGA 30 0 % I Ile ATA 5489 1.49 % I Ile ATC 2972 0.81 % I Ile ATT 15388 4.19 % K Lys AAA 19260 5.25 % K Lys AAG 7315 1.99 % L Leu CTA 2316 0.63 % L Leu CTC 2459 0.67 % L Leu CTG 1719 0.46 % L Leu CTT 8530 2.32 % L Leu TTA 10665 2.91 % L Leu TTG 8860 2.41 % M Met ATG 8593 2.34 % N Asn AAC 4578 1.24 % N Asn AAT 15984 4.36 % P Pro CCA 6738 1.83 % P Pro CCC 1769 0.48 % P Pro CCG 1749 0.47 % P Pro CCT 6358 1.73 % Q Gln CAA 13433 3.66 % Q Gln CAG 3493 0.95 % R Arg AGA 5616 1.53 % R Arg CGA 3269 0.89 % R Arg AGG 1895 0.51 % R Arg CGC 1833 0.5 % R Arg CGG 1085 0.29 % R Arg CGT 5788 1.57 % S Ser AGC 2518 0.68 % S Ser TCA 6765 1.84 % S Ser TCC 2492 0.68 % S Ser AGT 4870 1.32 % S Ser TCG 2147 0.58 % S Ser TCT 8814 2.4 % T Thr ACA 7728 2.1 % T Thr ACC 2122 0.57 % T Thr ACG 1607 0.43 % T Thr ACT 7589 2.07 % V Val GTA 3461 0.94 % V Val GTC 2593 0.7 % V Val GTG 2657 0.72 % V Val GTT 10995 3 % W Typ TGG 4055 1.1 % Y Tyr TAC 2561 0.69 % Y Tyr TAT 8458 2.3 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).