Meloidogyne incognita: 4779 partial CDSs (4722 contigs; 3707 clusters; 579466 codons)

AMINO ACID FREQUENCIES
======================
F	Phe	28961	4.99	%
S	Ser	41666	7.19	%
T	Thr	29632	5.11	%
N	Asn	30997	5.34	%
K	Lys	41110	7.09	%
*	stop	0	0	%
E	Glu	38568	6.65	%
Y	Tyr	18369	3.16	%
V	Val	32916	5.68	%
Q	Gln	24953	4.3	%
M	Met	12908	2.22	%
C	Cys	11959	2.06	%
L	Leu	53796	9.28	%
A	Ala	34258	5.91	%
W	Typ	6930	1.19	%
P	Pro	26584	4.58	%
H	His	13134	2.26	%
D	Asp	29406	5.07	%
I	Ile	37739	6.51	%
R	Arg	31063	5.36	%
G	Gly	34517	5.95	%
CODON USAGE FREQUENCIES
=======================
F	Phe	TTT	22398	3.86	%
F	Phe	TTC	6563	1.13	%
S	Ser	AGT	7530	1.29	%
S	Ser	AGC	3818	0.65	%
S	Ser	TCG	3278	0.56	%
S	Ser	TCA	9823	1.69	%
S	Ser	TCC	3545	0.61	%
S	Ser	TCT	13672	2.35	%
T	Thr	ACA	11813	2.03	%
T	Thr	ACC	2966	0.51	%
T	Thr	ACG	2621	0.45	%
T	Thr	ACT	12232	2.11	%
N	Asn	AAC	6819	1.17	%
N	Asn	AAT	24178	4.17	%
K	Lys	AAG	11478	1.98	%
K	Lys	AAA	29632	5.11	%
*	stop	TGA	0	0	%
*	stop	TAA	0	0	%
*	stop	TAG	0	0	%
E	Glu	GAG	9620	1.66	%
E	Glu	GAA	28948	4.99	%
Y	Tyr	TAC	4174	0.72	%
Y	Tyr	TAT	14195	2.44	%
V	Val	GTG	4296	0.74	%
V	Val	GTT	18858	3.25	%
V	Val	GTA	5600	0.96	%
V	Val	GTC	4162	0.71	%
Q	Gln	CAG	5177	0.89	%
Q	Gln	CAA	19776	3.41	%
M	Met	ATG	12908	2.22	%
C	Cys	TGT	8610	1.48	%
C	Cys	TGC	3349	0.57	%
L	Leu	CTG	2493	0.43	%
L	Leu	CTC	3761	0.64	%
L	Leu	TTG	14216	2.45	%
L	Leu	CTT	14019	2.41	%
L	Leu	TTA	15864	2.73	%
L	Leu	CTA	3443	0.59	%
A	Ala	GCC	4355	0.75	%
A	Ala	GCA	10933	1.88	%
A	Ala	GCG	2733	0.47	%
A	Ala	GCT	16237	2.8	%
W	Typ	TGG	6930	1.19	%
P	Pro	CCG	2978	0.51	%
P	Pro	CCA	10763	1.85	%
P	Pro	CCC	2625	0.45	%
P	Pro	CCT	10218	1.76	%
H	His	CAC	3648	0.62	%
H	His	CAT	9486	1.63	%
D	Asp	GAC	7800	1.34	%
D	Asp	GAT	21606	3.72	%
I	Ile	ATC	4492	0.77	%
I	Ile	ATT	24953	4.3	%
I	Ile	ATA	8294	1.43	%
R	Arg	CGA	5323	0.91	%
R	Arg	AGA	8658	1.49	%
R	Arg	CGC	2929	0.5	%
R	Arg	AGG	2845	0.49	%
R	Arg	CGT	9599	1.65	%
R	Arg	CGG	1709	0.29	%
G	Gly	GGA	15448	2.66	%
G	Gly	GGT	9458	1.63	%
G	Gly	GGG	4521	0.78	%
G	Gly	GGC	5090	0.87	%

# - number of times the codon is observed
% - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).