Meloidogyne javanica: 2086 contigs; 203135 codons AMINO ACID FREQUENCIES ====================== A Ala 11150 5.48 % C Cys 4217 2.07 % D Asp 9747 4.79 % E Glu 13289 6.54 % F Phe 11103 5.46 % G Gly 10992 5.41 % H His 4459 2.19 % * stop 192 0.09 % I Ile 13986 6.88 % K Lys 15780 7.76 % L Leu 19485 9.59 % M Met 4930 2.42 % N Asn 11306 5.56 % P Pro 8537 4.2 % Q Gln 8552 4.21 % R Arg 11042 5.43 % S Ser 14239 7 % T Thr 10254 5.04 % V Val 10925 5.37 % W Typ 2294 1.12 % Y Tyr 6656 3.27 % CODON USAGE FREQUENCIES ======================= A Ala GCA 3606 1.77 % A Ala GCC 1422 0.7 % A Ala GCG 893 0.43 % A Ala GCT 5229 2.57 % C Cys TGT 3071 1.51 % C Cys TGC 1146 0.56 % D Asp GAC 2641 1.3 % D Asp GAT 7106 3.49 % E Glu GAA 9918 4.88 % E Glu GAG 3371 1.65 % F Phe TTC 2425 1.19 % F Phe TTT 8678 4.27 % G Gly GGA 4918 2.42 % G Gly GGC 1643 0.8 % G Gly GGG 1492 0.73 % G Gly GGT 2939 1.44 % H His CAC 1240 0.61 % H His CAT 3219 1.58 % * stop TAA 121 0.05 % * stop TAG 34 0.01 % * stop TGA 37 0.01 % I Ile ATA 3237 1.59 % I Ile ATC 1640 0.8 % I Ile ATT 9109 4.48 % K Lys AAA 11462 5.64 % K Lys AAG 4318 2.12 % L Leu CTA 1244 0.61 % L Leu CTC 1295 0.63 % L Leu CTG 917 0.45 % L Leu CTT 4867 2.39 % L Leu TTA 6114 3 % L Leu TTG 5048 2.48 % M Met ATG 4930 2.42 % N Asn AAC 2360 1.16 % N Asn AAT 8946 4.4 % P Pro CCA 3408 1.67 % P Pro CCC 823 0.4 % P Pro CCG 952 0.46 % P Pro CCT 3354 1.65 % Q Gln CAA 6808 3.35 % Q Gln CAG 1744 0.85 % R Arg AGA 3103 1.52 % R Arg CGA 1860 0.91 % R Arg AGG 1042 0.51 % R Arg CGC 1018 0.5 % R Arg CGG 598 0.29 % R Arg CGT 3421 1.68 % S Ser AGC 1333 0.65 % S Ser TCA 3465 1.7 % S Ser TCC 1228 0.6 % S Ser AGT 2454 1.2 % S Ser TCG 1182 0.58 % S Ser TCT 4577 2.25 % T Thr ACA 4020 1.97 % T Thr ACC 1014 0.49 % T Thr ACG 906 0.44 % T Thr ACT 4314 2.12 % V Val GTA 1842 0.9 % V Val GTC 1348 0.66 % V Val GTG 1441 0.7 % V Val GTT 6294 3.09 % W Typ TGG 2294 1.12 % Y Tyr TAC 1475 0.72 % Y Tyr TAT 5181 2.55 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).