Nippostrongylus brasiliensis: 630 contigs: 75934 codons AMINO ACID FREQUENCIES ====================== A Ala 5916 7.79 % C Cys 1702 2.24 % D Asp 4117 5.42 % E Glu 4774 6.28 % F Phe 3031 3.99 % G Gly 5264 6.93 % H His 1835 2.41 % * stop 7 0 % I Ile 3808 5.01 % K Lys 5451 7.17 % L Leu 6176 8.13 % M Met 1943 2.55 % N Asn 3003 3.95 % P Pro 3711 4.88 % Q Gln 2691 3.54 % R Arg 4857 6.39 % S Ser 5278 6.95 % T Thr 3959 5.21 % V Val 5243 6.9 % W Typ 833 1.09 % Y Tyr 2335 3.07 % CODON USAGE FREQUENCIES ======================= A Ala GCA 1168 1.53 % A Ala GCC 1774 2.33 % A Ala GCG 1041 1.37 % A Ala GCT 1933 2.54 % C Cys TGT 672 0.88 % C Cys TGC 1030 1.35 % D Asp GAC 1998 2.63 % D Asp GAT 2119 2.79 % E Glu GAA 2210 2.91 % E Glu GAG 2564 3.37 % F Phe TTC 2191 2.88 % F Phe TTT 840 1.1 % G Gly GGA 2178 2.86 % G Gly GGC 1268 1.66 % G Gly GGG 313 0.41 % G Gly GGT 1505 1.98 % H His CAC 1018 1.34 % H His CAT 817 1.07 % * stop TAA 4 0 % * stop TAG 2 0 % * stop TGA 1 0 % I Ile ATA 547 0.72 % I Ile ATC 1890 2.48 % I Ile ATT 1371 1.8 % K Lys AAA 1966 2.58 % K Lys AAG 3485 4.58 % L Leu CTA 558 0.73 % L Leu CTC 1410 1.85 % L Leu CTG 1520 2 % L Leu CTT 1167 1.53 % L Leu TTA 384 0.5 % L Leu TTG 1137 1.49 % M Met ATG 1943 2.55 % N Asn AAC 1742 2.29 % N Asn AAT 1261 1.66 % P Pro CCA 1158 1.52 % P Pro CCC 621 0.81 % P Pro CCG 1053 1.38 % P Pro CCT 879 1.15 % Q Gln CAA 1146 1.5 % Q Gln CAG 1545 2.03 % R Arg AGA 937 1.23 % R Arg CGA 1003 1.32 % R Arg AGG 509 0.67 % R Arg CGC 884 1.16 % R Arg CGG 382 0.5 % R Arg CGT 1142 1.5 % S Ser AGC 948 1.24 % S Ser TCA 863 1.13 % S Ser TCC 858 1.12 % S Ser AGT 621 0.81 % S Ser TCG 1170 1.54 % S Ser TCT 818 1.07 % T Thr ACA 856 1.12 % T Thr ACC 1220 1.6 % T Thr ACG 893 1.17 % T Thr ACT 990 1.3 % V Val GTA 677 0.89 % V Val GTC 1499 1.97 % V Val GTG 1668 2.19 % V Val GTT 1399 1.84 % W Typ TGG 833 1.09 % Y Tyr TAC 1466 1.93 % Y Tyr TAT 869 1.14 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).