Strongyloides ratti: 2682 contigs; 320875 codons AMINO ACID FREQUENCIES ====================== A Ala 17201 5.36 % C Cys 6285 1.95 % D Asp 17476 5.44 % E Glu 20812 6.48 % F Phe 15138 4.71 % G Gly 18910 5.89 % H His 6679 2.08 % * stop 127 0.03 % I Ile 23850 7.43 % K Lys 25932 8.08 % L Leu 27556 8.58 % M Met 7569 2.35 % N Asn 19815 6.17 % P Pro 13870 4.32 % Q Gln 11696 3.64 % R Arg 13744 4.28 % S Ser 22992 7.16 % T Thr 17360 5.41 % V Val 18523 5.77 % W Typ 3090 0.96 % Y Tyr 12250 3.81 % CODON USAGE FREQUENCIES ======================= A Ala GCA 5397 1.68 % A Ala GCC 1660 0.51 % A Ala GCG 278 0.08 % A Ala GCT 9866 3.07 % C Cys TGT 5359 1.67 % C Cys TGC 926 0.28 % D Asp GAC 2223 0.69 % D Asp GAT 15253 4.75 % E Glu GAA 17605 5.48 % E Glu GAG 3207 0.99 % F Phe TTC 2677 0.83 % F Phe TTT 12461 3.88 % G Gly GGA 9674 3.01 % G Gly GGC 589 0.18 % G Gly GGG 744 0.23 % G Gly GGT 7903 2.46 % H His CAC 1080 0.33 % H His CAT 5599 1.74 % * stop TAA 79 0.02 % * stop TAG 31 0 % * stop TGA 17 0 % I Ile ATA 7221 2.25 % I Ile ATC 2185 0.68 % I Ile ATT 14444 4.5 % K Lys AAA 21370 6.65 % K Lys AAG 4562 1.42 % L Leu CTA 1529 0.47 % L Leu CTC 973 0.3 % L Leu CTG 417 0.12 % L Leu CTT 8415 2.62 % L Leu TTA 12837 4 % L Leu TTG 3385 1.05 % M Met ATG 7569 2.35 % N Asn AAC 2713 0.84 % N Asn AAT 17102 5.32 % P Pro CCA 9227 2.87 % P Pro CCC 440 0.13 % P Pro CCG 297 0.09 % P Pro CCT 3906 1.21 % Q Gln CAA 10344 3.22 % Q Gln CAG 1352 0.42 % R Arg AGA 7179 2.23 % R Arg CGA 866 0.26 % R Arg AGG 949 0.29 % R Arg CGC 476 0.14 % R Arg CGG 178 0.05 % R Arg CGT 4096 1.27 % S Ser AGC 608 0.18 % S Ser TCA 8644 2.69 % S Ser TCC 949 0.29 % S Ser AGT 4995 1.55 % S Ser TCG 455 0.14 % S Ser TCT 7341 2.28 % T Thr ACA 8838 2.75 % T Thr ACC 1310 0.4 % T Thr ACG 558 0.17 % T Thr ACT 6654 2.07 % V Val GTA 4908 1.52 % V Val GTC 1582 0.49 % V Val GTG 703 0.21 % V Val GTT 11330 3.53 % W Typ TGG 3090 0.96 % Y Tyr TAC 2203 0.68 % Y Tyr TAT 10047 3.13 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).