Trichinella spiralis: 428 partial CDSs (428 contigs; 396 clusters; 55852 codons)

AMINO ACID FREQUENCIES
======================
F	Phe	2529	4.52	%
S	Ser	3700	6.62	%
T	Thr	2702	4.83	%
N	Asn	2637	4.72	%
K	Lys	3982	7.12	%
*	stop	0	0	%
E	Glu	3804	6.81	%
Y	Tyr	2025	3.62	%
V	Val	3684	6.59	%
Q	Gln	2155	3.85	%
M	Met	1347	2.41	%
C	Cys	1409	2.52	%
L	Leu	5110	9.14	%
A	Ala	3709	6.64	%
W	Typ	701	1.25	%
P	Pro	2465	4.41	%
H	His	1280	2.29	%
D	Asp	3087	5.52	%
I	Ile	3277	5.86	%
R	Arg	3052	5.46	%
G	Gly	3197	5.72	%
CODON USAGE FREQUENCIES
=======================
F	Phe	TTT	1647	2.94	%
F	Phe	TTC	882	1.57	%
S	Ser	AGT	761	1.36	%
S	Ser	AGC	562	1	%
S	Ser	TCG	529	0.94	%
S	Ser	TCA	742	1.32	%
S	Ser	TCC	350	0.62	%
S	Ser	TCT	756	1.35	%
T	Thr	ACA	854	1.52	%
T	Thr	ACC	401	0.71	%
T	Thr	ACG	492	0.88	%
T	Thr	ACT	955	1.7	%
N	Asn	AAC	926	1.65	%
N	Asn	AAT	1711	3.06	%
K	Lys	AAG	1236	2.21	%
K	Lys	AAA	2746	4.91	%
*	stop	TGA	0	0	%
*	stop	TAA	0	0	%
*	stop	TAG	0	0	%
E	Glu	GAG	744	1.33	%
E	Glu	GAA	3060	5.47	%
Y	Tyr	TAC	810	1.45	%
Y	Tyr	TAT	1215	2.17	%
V	Val	GTG	945	1.69	%
V	Val	GTT	1442	2.58	%
V	Val	GTA	707	1.26	%
V	Val	GTC	590	1.05	%
Q	Gln	CAG	901	1.61	%
Q	Gln	CAA	1254	2.24	%
M	Met	ATG	1347	2.41	%
C	Cys	TGT	700	1.25	%
C	Cys	TGC	709	1.26	%
L	Leu	CTG	829	1.48	%
L	Leu	CTC	303	0.54	%
L	Leu	TTG	2004	3.58	%
L	Leu	CTT	888	1.58	%
L	Leu	TTA	816	1.46	%
L	Leu	CTA	270	0.48	%
A	Ala	GCC	583	1.04	%
A	Ala	GCA	1187	2.12	%
A	Ala	GCG	654	1.17	%
A	Ala	GCT	1285	2.3	%
W	Typ	TGG	701	1.25	%
P	Pro	CCG	551	0.98	%
P	Pro	CCA	1027	1.83	%
P	Pro	CCC	216	0.38	%
P	Pro	CCT	671	1.2	%
H	His	CAC	494	0.88	%
H	His	CAT	786	1.4	%
D	Asp	GAC	1012	1.81	%
D	Asp	GAT	2075	3.71	%
I	Ile	ATC	656	1.17	%
I	Ile	ATT	1822	3.26	%
I	Ile	ATA	799	1.43	%
R	Arg	CGA	727	1.3	%
R	Arg	AGA	622	1.11	%
R	Arg	CGC	424	0.75	%
R	Arg	AGG	205	0.36	%
R	Arg	CGT	852	1.52	%
R	Arg	CGG	222	0.39	%
G	Gly	GGA	1087	1.94	%
G	Gly	GGT	1151	2.06	%
G	Gly	GGG	232	0.41	%
G	Gly	GGC	727	1.3	%

# - number of times the codon is observed
% - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).