>Minc12610_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
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--------------------
--------------------
-----------------MYS
EFFAHPDDFIGAINL-NTPE
SRFLAVVEYYLNSFYPARKS
GVAKKPFNPILGETFRCRWT
LPGTVPSEQKTKKGPFPGTG
TN-----------------Q
VTFIAEQVSHHPPISAFYAE
HPEAGVSFNGYIYTKSSFLG
LSIGVHHIGSGTVTLHKYG-
EQYVVTFPSAYGRSIMS--T
PWIELGGRVEIHCEKTQYRA
EIEFITKPIFRGK-------
----AHQIQGNVFYGYS---
--------------------
--SKKPIIQLKGEWNSQIYI
KKGEGGDYQLFTN---VLAK
ADVNKECI-PVMKQEERESR
RLWRHVTLALFRDNIDVATQ
GCFLGGNFWFKNIRKGLGIY
F-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Mh10g200708_Contig165_26897..30171_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MEGTLSKWTN-----VMHG
WQHR--YFVLNDDVLCYYTS
KEKMARG-------QQRGCI
RLR------GAALGIDEEND
TLFTVAVDGKTFHLQGKNKL
ERNSWVRALERVIHEKCG--
----YYKPPQENPVVDLHKR
VTTAENQS------------
QMLLEQTRNLEQQLNKDSEK
ADHKRKKILSEILMTAKRLQ
STVDHS------LILLQQVQ
RDLG------------FDQA
QNSELNEAGTNGREDETKEE
ITLDDVNQMVSFSSSDDEFF
DAKNEEGSVRSRNLQESERS
GSTPAG--------------
-------------------S
TALTSSGSHHKGHRLSQTSL
KRVSLDGTELTSSEPD----
-----------WSGGDAKGE
NYDAIYNNTDEHDVG-DINK
QHG-SVLMHLLSQVSIGMDL
SKVTLPTFILERRSLLEMYS
EFFAHPDDFISAINL-NNPE
SRFLAVVEYYLNSFYPARKS
GVAKKPFNPILGETFRCRWT
LPGTVPSEQKTKRGPFPGTG
TN-----------------Q
VTFIAEQVSHHPPISAFYAE
HPEAGVSCTGYIYTKSSFLG
LSIGVHHIGSGTVTLHKYG-
EQYVVTFPSAYGRSIMS--T
PWIELGGKVEIHCEKTQYRA
EIEFITKPIFRGK-------
----PHLIQGNIFFGSS---
--------------------
---KKPLIQLKGEWNGQIYI
KKGEGGDYQLFTN---VVAK
SDVNKECI-PVMKQEDRESR
KLWRHVTLALLRDNIEVATQ
AKRWIEQRQREEKLKRDKEG
IQWKTRFFDKIG--DSWRYK
ESLNDRIDL-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Minc18967_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MTGWTIISVS---------
--------------------
--------------------
----------LCLLSIVFLS
VFVLCCSKRRKNRKINKTKT
KKGTKVATTPIEIKIDS---
-----QINVDTSNIELQDFP
QQPSSELP------------
VIETSSSPSEKRIDETKSQH
KHPIPSGQTSRSVKQTHTMY
NIVEDK--------------
--------------------
-------------EDENNEE
KKENKNESKSSKVENKDKLK
SSENKVLIDISNRPLQIQKI
NGE-----------------
--------------------
DKPSESSETEKEENNNEEEN
KENINNNDEQDWGDSD----
-------------------E
DFDAIYDLGHDAHGSTPIQD
EHHGSVLMHILSQVRIGMDL
GKVTLPTFILERRSLLEMYA
DFFAHPDCFIEATKEPSTPE
SRFLSILLNYLTSFYPARKS
GKAKKPYNPVLGEIFRCRWT
IPGTQPCKQKTKSGPFPGSA
TN-----------------Q
VTFIAEQVSHHPPITAFYAE
HPKSDISFNAYIYTKSVYLG
LSIALHNIGQGVLTLHRYE-
ENYSVTFPSAYGRAVMS-SA
PWFELEGKVKIHCEETQYRA
EIEFHGKPLLFGK-------
----PHQISGSIYHGNN---
--------------------
--SKKPIMYLKGEWNGQIFI
REGNRGKDKLFVDTR---AK
PDVVKECV-PVMQQEEKESR
RLWRHVTAALFHNNLEVATE
AKHLVEQRQRDERTQREKKK
IAWQTRYFDKGSDEYSWNYK
EPLNQRDTQ-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Mh10g200708_Contig1888_4195..6453_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MTEWLIISVS---------
--------------------
--------------------
----------LSFVSIVLFF
VFIICCVRRRRNRKTKIKKE
VATIPIEIKTKNDSQNN---
-------VISKSETKTFSQQ
QPKESLPP------------
IEPSLSYPSEKIINASEDQH
KPPIPSGKLSRSEKQTRTMY
MNENKE--------------
--------------------
--------------DEKNEE
QKENKNEIKPSKVENKDKRS
SSENVVLIDSEIETPPLQSQ
KTNNGG--------------
------------------EE
KQILPTTNSESSDIEKEENN
EEDNVNNKENTNNKNE----
------------KDWGDSDE
DFDAIYDLGHDAHGSAPIQD
EHHGSVLMHLLSQVRIGMDL
GKVTLPTFILERRSLLEMYA
DFFAHPDSFIGATKEPSTPE
SRFLSVLQNYLNSFYPARKS
GKAKKPYNPVLGEIFRCRWT
IPGTKPCKQKTKSGPFPGSA
TN-----------------Q
VTFIAEQVSHHPPITAFYAE
HPESDISFNAYIFTKSVYLG
LSIALHNIGQGVLTLHRYG-
ENYTITFPSAYGRAVMS-SA
PWFELEGKVKVHCEETQYRA
EIEFIGKPLLFGK-------
----PHQISGSIYHGNN---
--------------------
--SKKPIMYLKGEWNGQIFI
RQGNRGKDKLFVDTR---AK
PDVVKECV-PVMQQEEKESR
RLWRHVTAALFHNNLEVATE
AKHLVEQKQRDERTQREKKK
TVWQTRYFEKGSDEYSWCYK
EQLNQRENIK----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>15260.m00041_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MEGPLSKWTN-----VVHG
WQYR--WFILRDDALHYYTS
REKMMKG-------QQRGCI
RLR------GAVIGIDGENN
SLFTVTVDGITFHLQGRDES
ERNSWIRALEAVIHEQS---
---------GYYRVTSLNSP
AVLKAKAIEADKHLQDMINE
VRELEGLSTSANTEMKKTVD
DLVKSANRLLDTVKHAVILL
QMARSH--------------
--------------------
------------LEGASILG
LNVNGEGSEISEAKVIVPPL
SYSSSEDEFFDAETPSDDDK
FSQSDD--------------
------------------NS
NDIDNPGNGNNPGHNSNRNP
GRKISQTRKKSIQEPD----
----------------FADA
NADFDAAYEDAEEFDVGNVQ
QQHGSVLMHLLSQVSVGMDL
TKVTLPTFILERRSLLEMYA
DFFAHPDSFVGCADA-SSPE
ERFVSVVRYYMGAFYAARKS
GVAKKPYNPILGETFRCRWK
IPGMKRTKQLTKRGPFPGSD
RN-----------------D
LTFIAEQVSHHPPVSAFYAE
HPVKRVSFTGHIWTKSSFLG
LSIGVTNIGWGTVKLHDYG-
EEYVLTFPNGYGRSIMS--T
PWIELGGKVTVNCVKTGYSA
EIDFLTKPFFGGK-------
----AHRINGNIYRSG----
--------------------
--FKKPLLIIKGEWNGVITA
KPLNGSEYLFVDVKQYPEAK
KV------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>C32F10.1a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MEGPLSKWTN-----MVHG
WQYR--WFKIENDTLLYYTS
REKMLKG-------QQRGQI
RLTG------AVVGIDGENN
SLFTITVEGKTFHMQGRDLR
ERNQWVRILENSIRASSG--
-------YAKNVSVGTTPSQ
HFKQRTEEANEFLKTLVEKV
KALEQLKSGERAVDEKKTID
SLIAASNNLTNNVKHAIIYL
QMAQAR--------------
--------------------
LDPNMKTEKLMFTHPDLNEK
PSSRETPGTVSDSTQTSTDK
PISGIQHLDHLKPQRAESYA
SSDEEE--------------
------------------FY
DADEELIDLDNFESEKSGQE
SGDSNRTSDAAIMSSD----
-----------EDGYDFGDS
NEDFDEIYNNAEEHDIGNVQ
QDHGSVLMHLLSQVSVGMDL
TKVTLPTFILERRSLLEMYA
DFFAHPDLFIATNGN-DSAE
KRMIAVVRYYLNSFYAARKS
GVAKKPYNAILGETFRCRYS
VPNSSLSGKKTESGPWPGSD
EK-----------------Q
LTFIAEQVSHHPPISAFYAE
MPSEGISFNAHIYTKSSFLG
LSIGVASIGEGILTLHNYGD
EQYTITFPSGYGRSIMS--T
PWFEFGGKVKVECEKTGYRA
DIEFLTKPFFGGK-------
----PHRIQGSICRDG----
--------------------
--AKKPVLTLRGEWNGTMYA
KTQNGEEYVFVDVK----AK
PEVKKECV-PVMQQGKRESR
RLWRHVTAALLRNRIQTATT
SKRFIEQRQRKEAKERLESG
EKWTPLLFDTTDKDGEWMYK
QKFGVRKAV-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Smp_174070_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--MGSVNGSYR---------
-----IPITLNDNTVSDVVD
IPHTLQFD----------TS
RSN------SAYSTLKVKDY
DLKVHSINHTFINAQGGEGD
GENPFASCQESLSSASP---
---------IITQKPSRKHS
TRNSRRLE----------KG
KLHKRPSSTTESSIESHSVC
SHPEQLATISSSLPNDTVIV
KRCFDA--------------
--------------------
-----------LDSPSANYP
PLSIPRMPVRSYSSSDDDQA
QLDQEEEDEEFFDTQEDIPV
NCAITN--------------
------------------SP
QSVKDNTNINMYSNPTVPLT
KSGRYLPSQSSNNRTN----
---------------SSLDD
TFDELYDDENEEELG---SV
QSHGSVITHLLSQLRIGMDL
TRITLPTFILERRSTLEMYA
DFLAHADLWAVIPNG-STPR
DRMVSCLRWYLSAFHAGRRS
SVAKKPYNPTLGEIFRCYWP
LSKESGDDSSNASEKPQDKL
CNSGPVPWAP-------NNS
VVFLAEQVSHHPPISAFYAE
HVNNQIAVDGHLWTKSKFLG
LSIAVEMVGSAVISLLNHD-
EEYVVTFPCGYGRNILT--V
PWIELGGKTSITCLKTGYLA
NIEFRTKPFYGGK-------
----RDTLRAEVFGPND---
--------------------
---KKPFLIVEGEWNDKMLA
KWPHGKNELFIDTRNLPTVR
KHVL-----PRSRQEENESR
RLWEEVTYNLKVGNIDAASD
AKHRLEQRQRDLARQRRDSK
HTWTPEYFRGEG--DNWIYR
HPLIQRLHQPPNQNISSTEP
QTISKIMNLACSPDIVVNPV
SCNSPVTDSPQIVHNTTTES
SIPVIEYSASP---------
--------------------
--------------------
--------------------
--------------------
---------------
>Sjc_0300420_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MNGKDRENIL
KLMKRAKELHTDEDKSHLRK
RTEGQLLKFTN-----VMKG
YQYRWFVIDPDSGRMEYYEK
EDHKRSLK-------PRGAL
NLIY-----ASICPSDEDSQ
TFYINAANGDLLKLKATDSK
ERQYWVDRLRAVAEYHS---
-----EKAEQHPLIATLSGT
YESSNNTDLQSTTGSQVLTS
CGLYAKGPCSQANDVIQIND
QPIYENVPIADANTFPVFCP
GRPSDPRVQLTELFRQLEFE
NQALS-------------SV
VDTTSIRSPEITEVFKSLLL
SKATSQATLACLKRCMELIK
RQDITNVAENGKMTKSHNSN
TLGSSISASGFLKSVADSPE
SPQ--------------ITS
DKNFINDFSSIPSSDVQDIL
SRYPLPIKDMQVNSIDIPD-
--------DSDERDDNNNDN
SIKIDDHNNSLKQCVDPDDN
EQHKTIILHLLSQLKIGTDL
TKVVLPTFILAEYSLLEMFA
NYMTHPNLFCCITDY-EDPE
WRMIAFVQWYLTTFHAGHMD
TFPKKPYNPVIGETFHCSWI
VPPNHLKTEPYLTEINKDKC
KIFASNDNTP--------IV
IRYCAEQVSHHPPVTVFHLS
CPSKHMELTASLCTKSKFQG
MSVCTTMLGKSILKLGERND
EEYHFSLPTVYTRSILT--V
PWVELGDKVSITCPQTGYSA
CITFLTKPHYGDK-------
----LHRITGEIYNTQSSIS
HSPSDHSSKGSGSSPSDSFG
NGNLNLIARISGEWNKVIDF
EVFNKNSYKWSVNVMQLPSF
QKRIR----PIECQQPEESR
RLWQDVTKALQLRNFNLATE
KKQEIEERQRLSENYRALYK
FAFPVKYFTWNEN--TWIYR
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Smp_089120_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
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--------------------
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--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MNGKDRENIFK
LIKRAKELQTEEEKN-----
-HLRKRTEGQLLKFTNVMKG
--------------YQYRWF
VID-----------------
--------------------
--------PDAGRIEYYEKE
DHKRSLKPRGALS----LIY
ASICPSDEDSQTFFINAAN-
--------------------
--GDLLKLKAIDAKERQYWV
DRLRAVAEYHSEKA------
---EQHPLITTLSGTS----
--------------------
--------------------
--------------------
-----------ESSNHADSQ
NTGSQVPNSSKSSQSNEVNH
TSDQSPNGNFPIA-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>Smp_156000.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MYVVRKKNLLLSKATSQ
ATLDCLKRCMELIKHQD---
--------------------
--------------------
----ITSVVENGKTAKSYIS
NTTDSTSLYPCVFNTVVDSS
ESQKIN--------------
--------------------
----------------DMNI
SNGLSSSVQLSEEMKSILST
FPPPIKDMQINYRDIPND--
--------------------
-------------------E
DEIDDNCNDDNEAFANNNGN
NSSQK---------------
--------------------
--QIMNSYNDDDEND-----
EHNKKVILHLLSQLKIGMEL
TKVVFPTFILAEYSLLEMFA
NYMAHPNLFCRITDY-VDPE
WRMIAFIQWYLTTFHSGHLD
TIVKKPYNPIIGETFHCSWI
VPPDQINSESCLSEINKDTC
KMSTTTDNNHN-----APIV
IRYCAEQVSHHPPVTVFQFS
CPIKQMKLTGSLCTKSKFQG
MSVCAAMLGKLILKLGEHSD
EEYHFSLPTAYARSILT--V
PWVEFGDKVSVTCPQTGYSA
VITFLTKPHYEDK-------
----LHCITGEIYSTHSISP
TSSDRSSK--GPGSSPLSPV
GNSNHLIARISGEWNKIINF
EVLNKNLHKWSVTVNQLPVF
SKHIR----PIEHQQPEESR
RLWQNVTKALKLKKFDLATE
KKQELEERQRLSENYRALYK
FAFPVKYFTWHEN--SWIFK
TICSQ---------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>TS_TRISPI_Contig22.SN.32_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MSIALKLAYCHLDWIIA
SRSFTSNKFVLIFVRELETE
FFYMEP--------------
--------------------
------LPLCMSADEEHRLR
EILQQADAFRKREEMDLMRQ
PLEGQLLKFTN-----AFQG
WQNRWCVLDPNKGQLRMHIV
RLFAFSYYLKGECKNQKPRG
VLSLVN---AEINPSEEDSV
TFSVTPVAGEMYKFRASDIK
QKQEWVNRLRTVAADHT---
---------ERKIKNRKSQA
VVKRTTFS------------
--DNIYNGTARQVTVFTTLQ
NLLSSTSEQQNYLIRNIDEL
PRAVVDN-------------
--------------------
-----------VPVYQDCLA
VKSYLQSLLDNLNECFEALK
TVEQGIVSSLYAEASTNGDG
SS------------------
------------------VD
DQQSVVVESNDSYDEEDEQV
DDTLAVPLPVSIESSS----
--------------------
-GKIMISSGVGGSVQRRGQK
PKKKDSLLTVTSHLKLGTDM
TKVALPSVCMRGYSLLEMYS
NFFSNSSYFLDIAEK-RTAD
ERLISILKWYLTAFYFAFGD
DVSHKPYNPVQGETFTCSWM
QSVDDTDRRRR---------
--------------------
IRFHAEQISHRPPCTAIFAS
SSAGNLFFNATISHKATFMG
NSINVTSFGDAKLAVSTSD-
--------------------
-----AGDGSNKRNDNKNPT
TTTTITTVFLSFS-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------LPQMGG
VSDWLSISARSFHIDGTVDG
TGW-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
>TS_TRISPI_Contig4.a.SNAP.102_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
GSTKFDRSRFERNVGQRLGC
AQLLLECFHVMQICYCQKVV
IMEGPLSKWTN-----VIEG
WQFRLFVLDETAGTLSYYTS
QDKMKKGQ-------VRGCV
RLKG------AVVGIDDEDD
CTFTITVDQKMFHFQAKDYE
ERDRWISALEKTIQEHSDIY
RYR-FKHTNVGVARSSSSYI
QFEKRIAQVDTYLQMVIDRI
QHLESFVADLKPEEESGKIS
RIIQIANEMLDSVKHSVVLL
QYAKNEIVPEESKALVETNS
AVS-----------------
GEQKLNAGPLSNLEPFQKSG
IKPPPLEEEKIGDDDETQLP
TDSSLLSTVENIQFKDEPIL
SYSKSDEE------------
------------DELYYDSV
EQMAMLVDDMQIESREGEMN
NGIVNQLNNSSTGEADDFP-
---------YVLHNEPQFTD
PGVNFDMLYDDDAEDELEDT
REHGSVIMHLLSQLSVGMDL
TKIVLPTYILERRSLLEMYA
DFMSFPDLFERIADC-ELAD
DRMLAVVRWYLSTFYGGRRS
GLAKKPYNPILGEVFACCWN
SPSVKASDEKVADGPVP---
--------------------
-TATVNQITFVGEQYRHFTW
NIRRKSCSSMVTFGPSRNFW
DCPSRSTTSVRRACRFWNEA
KNTYSTFPTATAGRYLQ--L
RGLNLAANAASDAKRPHITR
ILNFPPRFEYNKRQSLNFAL
FVQNVLQRQSSLFESGSLS-
--------------------
--SGGEESVRDNSWTMERRH
AHQDQPNGMIGEEVFLDVRK
LDPTGKLCRPIAEQKPNESR
RLWRHVTAALKEKDVHRATR
CKFWLEQKQRDAAARRALSN
VAWKPKLFEQVAG--GWMYH
KPLSKRGQFPHQEK------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------
