>Smp_032500_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MALSTVRN
YDEDKKACDQFLRFYSKMDS
CGN-KHFVYSEQ--------
--------------------
--------------------
--LTRIANREQSVLYVSIDD
V----AEHSSDLANAIECNA
VRYTKIFAEVIDDLLPDFRT
VELVPQDVLDIFIDHRIRME
QRIRAADAETAPRAVSRDPE
PVNMAEVRSRFPPELLRRFE
VYFCGRSDAKPLCVRNVLAS
SIGHLIQVRGVVTRATEVKP
LITTATYTCDRCGAETYQEI
NNPTFMPLTVCGTAACKNAG
PGGGGRLHMQTRGSKFLKFQ
EIRIQELSDQVP-VGHIPRA
LTIYLRGENTR--------A
AQPGDHILV---TGVFLPSV
RGASFSG-------------
--------------------
--SGRTNQASVSLNTVSGGL
LTDTYLEAHSVQLLSKTDDV
TDAN----------------
--------------------
-------EPSEEEIERLRDL
EFYSLMAQSLAPEIYGHED-
-------VKKALLLLLVGGV
ELAPKEGLRIRGNLNICLMG
DPGVAKSQLLGFVDRLSPRS
QYTTGRGSSGVGLTASVMKD
PLTGEMTLEGG--ALVLADQ
GVCCIDEFDKMTEFD--RTA
IHEVMEQQTISIAKAGILTT
LNARV-AILAAANPAYGRYN
PDKSVEQNVDLP-------A
ALLSRF---------DLLWL
IQDKPDREHDLRLAQHITFV
HMHGSAPSATDSQIDSTSST
NHQQLLSLPELRRLIAVAKA
QPAPAVPAHLADYLVGAYVE
MRKEARANKEMTYTSARTLL
AIMRLSTARARLRAASEVSK
GDIDEAM--RLMEASRASII
TS-YEDSNRSGRPQSYKDVI
YHIVRELTAAG---DGTARI
ADIAERCATKGYTPAQLNEV
IEAYEDLNVWQVNIGRTRIT
TVA-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Sjc_0112300_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------MF
YIGHRIQVRGVVTRATEVKP
LITTATYTCDRCGAESYQEI
NNPTFMPLIACSTAVCKNAG
PGGGGRLHMQTRGSKFLKFQ
EIRIQELSDQVP-VGHIPRA
LTIYLRGENTR--------A
AQPGDHILV---TGVFLPSL
RGASFSG-------------
--------------------
--GGRANQASMLLNTASDGL
LTDTYLEAHSVQLLSKTDDV
TNAN----------------
--------------------
-------EPTEEEIERLRDL
EFYSLMAQSLAPEIYGHED-
-------VKKALLLLLVGGV
ELAPKEGLRIRGNLNICLMG
DPGVAKSQLLGFVDRLSPRS
QYTTGRGSSGVGLTASVMKD
PLTGEMTLEGG--ALILADQ
GVCCIDEFDKMTEFDRYQKF
EQNXX---------------
--------------------
--------------------
--------------------
------XXHDLKLAQHITFV
HMHGSAPSAIESQIDSNSDT
NQQQLLSLSELRRLIAVAKA
QPAPAVPAHLADYLVGAYVE
MRKEARANKEMTYTSARTLL
AIMRLSTARARLRASSEVSK
GDIDEAM--RLMEASRSSIL
TSPYEDGSRPGRPQSYKDVI
YHIVRELTAAG---DGTARI
ADIVERCATKGYTPAQLNEV
IDAYEDLNVWQVNIGRTRIT
TVA-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>13046.m00069_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------AP
V----RDALDAFIFQLVYLD
RKQNEDGS------------
--------------------
-------------------G
ADQIQDLRKKYPPQLLRRFE
VFFKGSSISKPLAIREVKAA
HVGKLIVISGIVIRSTEVKP
MASVMTYTCDTCGYETYQPI
AG--PTFIPPLNCPSKVCVE
NRANGRLQMQIRGSKFMKFQ
EMRIQELHSTFFNSERYRRK
CKSLRTRRFCP---------
---------------NYSLV
RTGFRQF-------------
--------------------
----------------TGGL
TTEVFVEAHHIENIN-----
--------------------
--------------------
-----MYELTDEEVEIVSQD
NFYELLAYSIAPEIYGHLD-
-------VKKSLLLALEG-G
VDKNVNGMKVRGCINILLMS
DPGVAKSQLLSYVDRLTIRS
QYTTGRGSFGVGLMAAVMKD
PATGEMTLEGG--ALVLADQ
GICCIDEFDKMMVAD--RTA
IHEVT---EQQTAKAGILTT
LNAR-VSIIAAANPAFGRYN
PKKSIEHNVDLP-------A
ALLSRF---------DLLWL
IQDRPDRESDKRLAEHITYV
HMKGLEPEREGMKP------
----LDMSLIRRYIALCKRK
QP--VIEEKLRDRLVDMYVD
LRKDARNNRNSVFTSPRSLL
AVIRLSSALARLRLSDVVQS
SDIDEASGGRIWDFTCLSSV
TTEQLKQHEIPILDQAFAVI
RDLYHSISDDE---NRSLPL
QRVFEKCFAKGISEEVVQEC
INTYTANGVLMVDRQQRIVF
TVA-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>14955.m00252_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MAYEIAD
YDREKEKIWDFLTTFYHEEA
DGM-KLFPYDK---------
--------------------
--------------------
-QIARLAEREQVGLYINMDD
V----NEYDPVLYVAIHKNA
RRYHILFGDVIDSLIQQKLG
EKQPPVRDALDAFIFQRVYL
DRKQNEDG----------SG
ADQIQDLRKKYPPQLLRRFE
VFFKGSSISKPLAIREVKAA
HVGKLVVISGIVIRSTEVKP
MASVMTYTCDTCGCETYQPI
AG--PAFIPPLNCPSKDCVE
NRANGRLQMQIRGSKFMKFQ
EMRIQELNEQVP-VGSIPCS
LTVNVIGENAR--------A
CVPGDVVRI---TGTFAPLM
RTGFRQF-------------
--------------------
----------------TGGL
TTEVFVEAHHIENINMGKVI
FENS----------------
-------------------E
DILGEQYELTDEEVEIVSQD
NFYELLAYSIAPEIYGHLD-
-------VKKSLLLALVG-G
VDKNVNGMKVRGCINILLMG
DPGVAKSQLLSYVDRLAIRS
QYTTGRGSSGVGLTAAVMKD
PVTGEMTLEGG--ALVLADQ
GICCIDEFDKMMDAD--RTA
IHEVMEQQTISIAKAGILTT
LNAR-VSIIAAANPAFGRYN
PKKSIEHNVDLP-------A
ALLSRF---------DLLWL
IQDRPDRESDKRLAEHITYV
HMKGREPEREGMKP------
----LDMSLIRRYIALCKRK
QP--VIEEKLRDRLVDMYVD
LRKDARNNRNSVFTSPRSLL
AVIRLSSALARLRLSDVVQS
SDIDEAV--RLLEACRASVT
T-EQLKQHEIPILDQAFAVI
RDLYHSISDDE---NRSLPL
QRVFKKCFAKGISEEVVQEC
INTYTANGVLMVDRQQRIVF
TVA-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Mh10g200708_Contig151_20377..23875_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MAEND
YEKAKDQIEDFLRSFYTEDE
NEL-KTFKYLN---------
--------------------
--------------------
-QIGQLAKRQQISLYIEQDD
V----YVHDPELYSSINGNT
VRFRLLFSEVVQKLVEEALG
DDQPAVIDALDAFLFQRLYM
DRKMRLDK----------GD
LLQEDDPRKNYPPELLRRFE
VYFKVRDEIKPLAVRELRAQ
FVGKLVSIKGIVIRATEVKP
LANVITYICDTCGAEAFQPV
N--SLSYMPVFNCPSNECIQ
SKANGRLQMQIRGSKFVKFQ
EIRVQETTEQVS-VGGIPRS
LTVYLTGENTR--------K
AIPGDTVQV---CGVLVPQL
RTGFRQM-------------
--------------------
----------------VGGL
VTEVFLEAHHIQNNRDENEE
FLDD----------------
--------------------
-------ELTEEEIQLVSHD
NFYDHLAYSIAPEIYGLTD-
-------VKKSLLLSLVG-G
VNKNASGMRIRGALNILLMG
DPGVAKSQLLTYVDRLALRS
QYTTGRGSSGVGLTAAVVKD
TLTGEVSLEGG--SLVLADR
GICCIDEFDKMVEGD--RTA
IHEVMEQQTISIAKAGIMTS
LNAR-VAIIAAANPAYGRYN
PSRSIEDNIHLP-------A
ALLSRF---------DILWL
IQDNPDRDSDRKLADHITYV
HRKGEQPDAAFKPVD-----
------MKLFRKYIAVCKRK
DP--VLPDELKELLVDKYVE
LRRESKNSADSTFTSPRILL
AAIRACTALARLRLSNVVEA
ADVKEAL--RLLDSARESLR
AHKQTTTDRSRDPVN--RAF
DTLREMLRESD---GQQVLL
EKLYARCAQRGIVYGVVDEC
IYGRWKHALFVDPTNKTVQV
V-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Minc05086_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MADND
YERAKEQIEDFLRNFYTEDE
NEL-KTFKYLN---------
--------------------
--------------------
-QIAQIAKRQQISFYIEQDD
V----YVHNPELYTSINGNT
VRFRLLFSEVVQKLVEEALG
DEQPAVIDALDAFLFQRLYM
DKKMRLDK----------GD
LTQEEDPRRNYPPELLRRFE
VYFKVRDEIKPLAVRELRAQ
FVGKLVSIKGIVIRATEVKP
LANVITYICDTCGAEAFQPV
N--SLSYMPVFNCPSNECIQ
SKANGRLQMQIRGSKFVKFQ
EIRVQETTEQVS-VGGIPRS
LTVYLTGENTR--------K
AIPGDTVQV---CGVLVPQL
RTGFRQM-------------
--------------------
----------------VGGL
VTEVFLEAHHIQNNRDENEE
FLDD----------------
--------------------
-------ELTEEEIQLVSHD
NFYDHLAYSIAPEIYGLTD-
-------VKKSLLLSLVG-G
VNKNASGMRIRGALNILLMG
DPGVAKSQLLTYVDRLALRS
QYTTGRGSSGVGLTAAVIKD
TLTGEVSLEGG--SLVLADR
GICCIDEFDKMVEGD--RTA
IHEVMEQQTISIAKAGIMTS
LNAR-VAIIAAANPAYGRYN
PSRSIEDNIRLP-------A
ALLSRF---------DILWL
IQDTPDRDSDRKLADHITYV
HRKGEQPDATFKPVD-----
------MKLFRKYIAVCKRK
DP--VLPDDLKELLVDKYVE
LRRESKNSADSTFTSPRILL
AAIRACTALARLRLSNVVEE
ADVKEAL--RLLDSARESLR
AHKQTTTDRSRDPVN--RAF
DTLREMLRESD---GQQVLL
EKLYARCAQRGIVYGVVDEC
IYGRWKHALFVDPTNKTVGI
V-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Minc05914_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MADND
YERAKEQIEDFLRNFYTEDE
NEL-KTFKYLN---------
--------------------
--------------------
-QIEQIAKRQQISFYIEQDD
V----YVHNPELYTSINGNT
VRFRLLFSEVVQKLVEEALG
DEQPAVIDALDAFLFQRLYM
DKKMRLDK----------GD
LTQEDDPRRNYPPELLRRFE
VYFKVRDEIKPLAVRELRAQ
FVGKLVSIKGIVIRATEVKP
LANVITYICDTCGAEAFQPV
N--SLSYMPVFNCPSNECIQ
SKANGRLQMQIRGSKFVKFQ
EIRVQETTEQVS-VGGIPRS
LTVYLTGENTR--------K
AIPGDTVQV---CGVLVPQL
RTGFRQM-------------
--------------------
----------------VGGL
VTEVFLEAHHIQNNRDENEE
FLDD----------------
--------------------
-------ELTEEEIQLVSHD
HFYDHLAYSIAPEIYGLTD-
-------VKKSLLLSLVG-G
VNKNASGMRIRGALNILLMG
DPGVAKSQLLTYVDRLALRS
QYTTGRGSSGVGLTAAVIKD
TLTGEVSLEGG--SLVLADR
GICCIDEFDKMVEGD--RTA
IHEVMEQQTISIAKAGIMTS
LNAR-VAIIAAANPAYGRYN
PSRSIEDNIRLP-------A
ALLSRF---------DILWL
IQDTPDRDSDRKLADHITYV
HRKGEQPDATFKPVD-----
------MKLFRKYIAVCKRK
DP--VLPDDLKELLVDKYVE
LRRESKNSADSTFTSPRILL
AAIRACTALARLRLSNVVEE
ADVKEAL--RLLDSARESLR
AHKQTTTDRSRDPVN--RAF
DTLREMLRESD---GQQVLL
EKLYARCAQRGIVYGVVDEC
IYGRWKHALFVDPTNKTVGI
V-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>F32D1.10_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MKTTTYNTD
WAAEKTKIRSFFDEYYVDNE
DGSGKAFPYRD---------
--------------------
--------------------
-QVFEIARRDKQAIVVNVDH
IKESDIPDALELSEAITSNT
KRYEVLFKDTISDMIQDYLG
DKQAPVIDALDAYMFQRLHM
DRNEGAAN-----------E
EVSLQDKRKKYPPQLLQRFE
VYFTTDDAAHETCVRNIKAT
EIGHLVSMKGVVIRATEVKP
CVEVMTYTCDTCAAEVYQPV
KG--MQFTPPVNCPNKECVE
AKANGRLHMQLRGSKFVKFQ
ELKIQELSEQVP-VGSIPRT
MTVHVYGEMTR--------K
CNTGNVVHV---SGVFLPIM
QSGFRPT-------------
--------------------
-----------------GGL
VADTYLEAHYINNLDDNPTF
NGVQ----------------
--------------------
---------SAELEVLRRKG
DNYETLAASIAPEIFGHVD-
-------VKKCLLMALVG-G
NDNSSNGMKIRGCINVLMMG
DPGVAKSQLLGYVNRLAPRS
QYTTGRGSSGVGLTAAVMKD
PVTGEMSLEGG--ALVLADG
GICCIDEFDKMMDHD--RTA
IHEVMEQQTISIAKAGIMTT
LNAR-TAIIAAANPAYGRYN
PNRSIEQNVDLP-------A
ALLSRF---------DLILL
MQDKADRENDKILAEHITYV
HQHGCHPNREKKDLIS----
------LETLREYISLCKTY
TP--TVDPALRERIVEAYVE
MRRDARYSSDPTFVSPRMIL
GIVRMATARAKLRLSTIVDE
SDVEEAL--RLMQFAKDSLR
P----EQNKIEKRMAPVDAA
FAVLRELYHAD---NAPIAI
SNAIQRCARKGISEVALKKC
LDQYTANGLLVMDRQNIVFA
MN------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>TS_TRISPI_Contig5.c.SNAP.184_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------MVVRRD
YESEKTKIRDFINNFYVQDN
DGRGKIYVYLQ---------
--------------------
--------------------
-KITSLANRQTVAFVVDLND
L----LEYDPDLVESVVNNT
RRYTELFSVVVEDLIFKALQ
GRAPPIKDCYDEFVNYRINF
ELQKQRD------------R
GETISNPSAAYPPDLLRRFE
VYFKALSNEKTYSVRQVGAE
QIGKLVTIRGVAVRVTEVRP
LITIVTYLCTECGCEIYQPV
TG--PNYTPAECCPSKECKE
NKTRGRLIFQIRGSKLVKFQ
EVRIQEHSDQVP-VGHIPRS
LTIHLRGENTR--------L
INPGDHVHI---TGVFLPKL
KTGFRQL-------------
--------------------
----------------IQGL
ISETFMEAHHIVCLSKTNDE
INED----------------
--------------------
-----HLRLSEDDIKLMAED
DFYDKLTYSIAPEIYGHED-
-------VKKALLLMLVG--
--------GVDRSINVCLMG
DPGVAKSQLLSYVDRLALRS
QYTTGRGSSGVGLTAAVIHD
QLTGEFTLEGG--ALVLADQ
GICCIDEFDKMMDAD--RTA
IHEVMEQQTVSIAKAGIIAT
LNAR-TSILAAANPAYGRYN
PRRSIEQNIQLP-------A
ALLSRF---------DLIWL
IQDKPDRENDLKLAKHITFV
HAHSKEPPSQFKPLS-----
------MRLMRAYIALCKRK
HP--TVPESLTENLVSTYVE
MRKDAKSDKDAMFTSPRSLL
AILRLSTALARLRLADEVVE
DDVMEAC--RLIEVSKESLR
P----QREGRGRVIQPVDQV
FAILRELLVQQPDKSGEISM
QDAINKCIRKGIDTHLLEDC
LETYEEQGVLMLNERRNKII
FTMTAE--------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Smp_002810_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------MS
EVNKENRAEYIRRILFSQLP
ERRNAFDVDLLLSEYAELVD
NMK-----------------
-----YGINNYAEG---ALR
LAEGCKNESNHWRSA---MT
VDMALNALEGVTFKQPCPFA
NQSLPSDFDVTKFCSVLTEL
FDGEDSSNQVCESVRNTNVH
FSSVGQKR---SSVDFEKHY
SSPKR---------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------HLEK
SESTSFHKIMDSKS------
----SITWDDIAGLEFSKKT
LQEIV---ILPMLRPDLFVG
LRGPPKGLLLFGPPGTGKTL
IGKCIASQSNSTFFS-ISAS
SLTSKWVGEGEKLVRALFSI
ARIH--QPSVIFIDEVDSLL
TQRSETEHESSRRIKTEFLV
QLDGITTNDDERILFIGATN
RP-----QELDEAARRRFVK
RLYIPLPTRSARKQIVQRLL
R--QNHHTLKEEDFWDIADR
ANGYSGA--DMANLCREAAM
G-----PIRSLTME---AIQ
HIACDEV--------RPVEL
TDFHA--AFRQVRASNSSSD
LEQYLK---WNSQYGSFEV-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Sjc_0049080_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MNSLE
PVMQSKEQMYG---------
--------------------
--------------------
-----KTKQAKIVNEIDVFT
G----QKSICQNINTHQTRG
YGNSSLLFLWKPISVEQTRS
PRCNAFDVDLLLSEYAELVD
NMKN----------------
------GINNYAEG---ALR
DAEGCKNESNHWRSA---LT
VDMALSALEGVTSKETCILP
KQSLPSDFDVAKFCSLLTGL
FD-----------GESHVSQ
WNQNLKVKRNENCNKVSLTY
GSSKRSLGSRRG--------
--------------------
--------------------
--------------------
--------------------
--------------------
-------VRSSFVPPFEKDS
DSST----------------
--------------------
--------------------
----------SKPTSNYDG-
--------------------
--------------------
--------------------
-ECKLESVCD-----ERLKQ
LDQKIIDMIMS--EIMD---
-SKSSVTWDDIAGLEFSKKT
LQEIV---ILPMLRPDLFVG
LRGPPKGLLLFGPPGTGKTL
IGKCIASQSNSTFFS-ISSS
SLTSKWVGEGEKLVRALFLV
ARIH--QPSVIFIDEVDSLL
TQRSETEHESSRRIKTEFLV
QLDGIATSEDERILFIGATN
RP-----QELDEAARRRFVK
RLYIPLPTRSARKQIVQRLL
Q--QNHHTLKEEDFWNIADQ
ADGYSGA--DMANLCREAAM
G-----PIRSLTIE---AIQ
HIACDEVS------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>F32D1.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MYSPKRVKLNVTS
G---------MRKRPETGEN
NDDLYPPTALARNGISPYFI
GKPRRKIVVETPSDSAQQQP
PFK-----------------
SRSQQNGLDDELDG--IIID
EDEDRTVDVSFSQKQDTRKL
KSRPFLGEKSSFKLGEIPKP
KEEKRREEPFTMRGFDFGSD
DK----------VTKIRDKI
CDIVDPTNARRTDPNFIRQM
HENTLKGIEVASNPHFKKTR
APTKNRAAIQN---------
-----------TLGTLYPSF
TTAAGQD-------------
--------------------
----------------PQNS
KFQVPLDRQSSSQSIGSLAG
IP------------------
--------------------
--------------------
--------------------
--------------------
--PARRAPDIPKRCSNPLIR
KAMGMDTEGGGKDE------
-KMSGLRAEP------TLKH
FDENIISLIES--EIMS---
-VNNEIGWADVAGLEGAKKA
LREIV---VLPFKRPDVFTG
IRAPPKGVLLFGPPGTGKTM
IGRCVASQCKATFFN-ISAS
SLTSKWVGEGEKLVRALFSV
ARLK--LPSVIFIDEIDSLL
SSRSESEHESSRRIKTEFLV
QLDGVNTAPDERLLVLGATN
RP-----QELDEAARRRFQK
RLYIALPEPESRTQIVQNLL
VG--TRHDITNHNLERIREL
TDGYSGA--DMRQLCTEAAM
G-----PIRDIGDD----IE
TIDKDDI--------RAVTV
MDFAE--AARVVRPTVDDSQ
LDAYAA---WDKKFGCLPPP
SISR----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>15032.m00058_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MLHPQKLEQ
QNYETFNKAYLKSKQLVTEG
VSIDEISSNNDEQRKRIAME
KYR-----------------
--------------------
MGIEYFEKALKISPDKVYPE
KRSEVITHREAMKRNLEATK
GRLSDLEKMFPSKGNRNLQH
R------------PVQFVSP
SISKPQTAQLSSRPISSEKK
NINYSNARTRSN--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------LLKG
VDDKFGGPLLN--EILN---
--QDDVKMSDIIGAETAKRA
LEETV---ILPTVNPSLFSG
LRQPAQGILLFGPPGNGKTL
LARAVAGECGSTMFLNVSAA
SLTSKWVGDAEKIVRALFQI
ARNG--QPTIIFIDEIDSIL
CERNEKETEVSRRMKTEFLI
QMDGMLSSKDDRLLVIGATN
RP-----EELDSAILRRFPK
RILIDVPNAAARLKLIMSLL
EKTKTSFDLGLTQRQILAEW
THGYSNS--DLVALCREAAM
V-----PIRDLSRK---DIK
NLVSTEL--------RPITL
RDFEI--AMKAIKPSTNERM
LQKLRK---YAATAGQSD--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>Mh10g200708_Contig772_2156..4478_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MIINLLLLFQRTLAY
YFSNLFERFFKKTQITETQQ
GQQLMSSSSRQPVNEDVAYA
N-------------------
-----------------YIL
FQERTAKARESLRKALEADE
TRSNKRGVILLYKSAMRDFE
PVLSTRLSSCPPYKHAEIRQ
QQ-----------EKLESLI
ESLRGRLTELEEDERCKSGD
RTHTREATVSRP--------
--------------------
--------------------
--------------------
--------------------
-----------------ITR
STREAPTSKSVSALSSSMAN
S-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------KLLKG
VNSKFGEEILS--TIL----
ADSERITLRNVEGNEAAKEA
LEESV---ILPSLNPKLFTG
LRAPCKGILLFGPPGNGKTM
IAKALATECRSTFFN-VSAA
SIMSKWVGDGEKMVQALFQV
ARNA--QPSIIFIDEVDSML
CERSEQENGVARRVKTEFLI
QMDGCANKSEDRILVLGATN
RP-----NELDEGFLRRFPK
RIFIDLPEKQARASMIKSTF
HGSNTQAALSDRELNYIAEQ
TDGYSYS--DLDTLCRSAAL
I-----PLRSIDRS---NVH
KFTAAHL--------RPVNL
QDFEA--ALTTVKPSLNKEN
RQKLLEFARGHAQILE----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>C24B5.2a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MFAFSKGPAGSSTYD
RVAQKFQDGYEKMRAAIEMD
ELTKHAGSIQEKLRTAELYK
EAR-----------------
--------------------
---SLLKEANEFNIMDIPET
RRSEIRDKRQNMMKLEKSAQ
DRLIAICNEVDPNVK-----
-------------QSRSATV
GPSRPASAARVTPRPTRATA
PASLPMHQNPVN--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------RAALLNG
VDKVIGERLLD--EVLD---
--NTGVRMDDVAGCHSAKAA
LEEAV---ILPALNPNLFKG
LRQPVKGILLFGPPGNGKTL
LAKAVAGESKQMFFN-ISAS
SLTSKWVGDSEKTIRGLFQI
ARNA--QPSIIFIDEIDSIL
CERSEKDAEVSRRMKTEFLV
QFDGATSSADDRILVIGATN
RP-----HELDDAVLRRFPK
RIMLNLPDEEARKELITKTL
KKHNMMDGLISSDIRYIASN
TSGFSNS--DLVALCKEAAM
V-----PIREIDRS---KLS
MTDGEKI--------RKIRA
SDFDT--ALRTIRPSTSQKI
MSKLSD---FSRSFGC----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--
>12688.m00060_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MNQKKAK
NNDNSLFTNFNQMEPETTTE
RHFDVSKNQKVLELQRRICS
RTN-----------------
--------------------
--TNKEMTQQYLEGREVALE
NQLLLYKMDEKGTGCESVQN
KQIKVNVGCGVANKREGWKA
D-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------ESLKN
LEDNVINLIEA--EIMS---
-MGTDIQWTDICGLEPAKKA
LREII---VFPFLRPDIFKG
IRAPPKGVLLFGPSGTGKTM
IGRCAASQCKATFFN-IAAS
SIMSKWVGEGEKLVRALFAI
ARVL--QPSVVFIDEIDSLL
KSRDESEHDSSRRIKIEFLI
HLDGVATTSDERILVLGATN
RP-----EELDSAVKCRFAK
RLYIGLPSAAARAQMIFSLL
S--DQEHNLSDDDVQSIAKL
TDGYSGA--DMKQLCSEAAM
I-----PVRNIVDSSSFDLV
SSAPDNTNANNEKTQRYLGG
RKVGLGSKLLLKMDTKETGC
ESLQNKQTKMNFECGVTHKR
EGWKADESLKNLEDNIINLI
EAEIMPTRTDIQWADISGLE
LAKKALKEIIVLPFLRPDIF
KGIRAPPKGVLLFGPPGTGK
TMIGRCVASQCNATFFNIAA
SSITSKWVGEGEKLVRALFA
IARVLQPSVVFIDEIDSLLK
SRNESEHDSSRRIKTEFLIH
LDGVATTSDDRILVLGATNR
KY
