>Smp_173090_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
DPAVAGTYGLRMEELIYNLA
DTYLFFNELEECDQVHIDDI
RGDDNYQDLMNFRSDPEAYG
DNSSTITQSIILSSSSTSSS
STTITTTVHAPTTSSLETSS
PINGSMLYN--VSVLLGYP-
--KANQWINLKNNLDILTDH
--WLSMAMKATEKINNRE--
---DSVNILVTTT----QFI
PSLAKILLYGYGNSFQIENI
YSATKVGKENCFERIASRFG
RKCTYVVIGDGKEEEDAAKQ
----FNWPFWRI-----NAH
SDLNAL--------------
--------------------
----------NHALDLGYL-
---------
>Sjc_0045910_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
---------------MVHMI
SNENYTTDTTNNNNNNSSDS
SLLSLNNESVTNSVNHLSVS
--------------------
--------------------
-------------------I
ENNDITPSSICQYHSSTITT
ED----------KIFTTIAN
PSTKRNDSGDELVNSNIFNM
ELMSTFTESKENCLNSSN--
---------------LLEMS
TTAYPVTTSCQVKYSYFPTM
FINNSSVGENHCFS------
-----KESWMINENSLTDKN
CLNSQIQHDYHQLNCLHNDH
HSQYGDNPPPPPHHHHHDMV
D-----------YSKTTLQQ
RQYQLQHQENISTPLNSIPL
TDLYSTSNSYLQTKIINSTT
LQSINETLHIQQVQQHQHQQ
LRDLQKSEDKFTRIFIWDLD
ETLIIFHTLLTGYYAHRYGK
DPAVAGAYGLRMEELIYNLA
DTYLFFNELEEYDQVHIDDI
RGDDNCQELTNYRSNFDGCG
NNSSTIEKSASFGSTIITTP
THAPMISSLDSLSSINGSIV
SSLPPPHPQ--ISSSSASS-
--SVTTLSNMIGETSTRVNT
P-NMHGSVEWMRKLSLRY--
---RKIREIYNCSXT--QFI
PSLAEILLYGYGNSFHIENI
YSATKVGKENCFERISSRFG
RKCTYVVIGDGKEEEDAAKQ
----FHWPFWRIN-----TH
SDLIALN-------------
--------------------
-----------HALDLGYL-
---------
>TS_TRISPI_Contig32.SNAP.56_T_spiralis.071204.pep_
MSTSDAVESSLVCASVRLQL
QTPVVLIFDWLLKKQVAKVA
LACSNRCSRSRRRAVAYDNT
SPLWKYFGSAYKRGTLHCRS
RLIVPSFDTTNIDSFKQFTA
NNPLNCSTDTDQQQQQQPTS
TISTESGAESSAFTVVGPSF
IIQPSPSTLQAKSSSNDFDL
PGG--AANFVDSAAPQQTRF
QLSASPCARLTDSAASLYFS
VSSQSSAEECSSYTSASRWS
SDSFTSSNNSAHSNKVIAVE
TLARPTLASSPNSAIKGAAA
MMYGTISAEMADIASGKSLL
CGVSTSSALSPYCASAMYNG
QSPLSNYSISTTNHGAFYGS
QSNQSSYPTVFAQACGRSIK
SNPYPLNAYLSAATAGISPA
NAYYGTAYAAPSFATGGIVN
PQNFAGANQALEYGGYSTVG
GYPQTYPQYYTNLGPYPAYN
GPLACVGSSNAGAASTATYQ
LTQIPSCTSISTHNSSQSSA
DAFSIDSPTSKITKGKRRRT
ANMSPTLDGSYERIFLWDLD
ETCILFHSLLTGAYASKFDK
DVNASVSVGLRMEELIFYLS
DTHFFFNELEDCDQAHIDDI
AADDS-QDLSTFSLSSEGLP
IPTTN-------AATFCLVP
GVRGSIDFMRKIAFRYRRIR
DLYNLYKDN--VGGLLGCG-
--KQEQWLQIRNDIETFTDS
--WHSLVLKCLSQITSKT--
---NYANILVTTS----PLI
PTYAKLLLYGLSSMFPIENI
YCAAKIGKEACFERILHRFG
KKCTYVVVGDGREEEVAAKQ
----MQFPFWRVT-----NH
SDLLAL--------------
--------------------
----------HHALELGHL-
---------
>13454.m00037_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------VKN
SAFXVSSSSNDTISRESSG-
--------------------
--------------------
--------------------
--------------------
--------------HLETSP
AAFFGASFGLTQLPGAVKPE
NLMPTLSERPVALTAMSD--
---------------AAAAT
AAAVAYDSRIIGATPYYNSX
YPSASYAGMYAASG------
-----TQNYYPVVSSSLRGS
AAAAAAATSFPFAAAAASHA
YYGNGYTSAHFDY-----AS
---------------YPAAM
HCYGGRSGYYGCSINPVSSN
SSLYTMNSLANDMNTSNQLS
SFNTKHETKRPNKAIKRKKN
PGATNSPEKQYKRAFIWEME
DVCVLSNFFLRSNDPIRNER
LAEMINNNVNRLITSIFGID
Q------DDQDCDYVNIEDA
NIDDTFDDLSYSTVGIDTPS
TSAIN-------NTESSLLG
HARGGVDWMRKLAVKYQHIK
DTYNSYKNN--FAGLLERTG
NTERAELLALKSTMDPLAQG
--WGESVGQCLKLIIDR---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------
>C49A1.4a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
------------------ML
PDSEGQKLKTFLLGTGTTLD
PSLDPTGNSNFSMATTSDS-
--------------------
--------------------
--------------------
--------------------
----------------STIW
TALPASQPGDKDIP-TVDLA
AISEAYGSTSSTTSLTSS--
--------------------
---VTSQYQYNSYPQYAMYT
SANPANYYQQVTAN------
-----LRAGTTAFPYSLTTP
SYYGSYPVDYTSAAAAYQNP
YYTNLRGGTAAPYYNPLNAT
-----------TAAAYASVA
SSVLGTDAVNLGTSSDG---
---------------STGVP
STVTSFSLKEKKPKVSKKKK
TGSCSPGDETYARVFIWDID
DIAVISRNYLASVTHTNEFY
ARAANSVSHLMERIALNNFA
DVN----EFLEGDITNIEDA
VVDETTMDSGPIDN-LRGLD
VMRR--------VAPKYSAF
RQFYTENSTKNDVAGFKQEQ
NGFNFELLE--RVG-FGAR-
--EATELYQSAIQLQTLPNF
GQRWPCAQRCMDLVVEKSKL
SAEKYANVVLSND----GLV
LGAAQLMISGLNSSVPVENI
YSISKQGKESVFEKIQSRFG
KKCSFICITSGDTANSAKR-
----LNIPVWPLN-----SN
TDLDKL--------------
--------------------
----------YSALDNFLLG
G--------
>Mh10g200708_Contig2233_925..3311_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
------------------MP
SRNPYWTAGHEWDLAAMAMG
RSNDGGQQSLNNINSQQQLQ
--------------------
--------------------
--------------------
--------------------
-------------QQQQQNN
AAYYGQMIAAASATNGNAQT
SAWYPTQNYASYYGLGGVQR
-----VGAALNGYLGSPYSG
EFIEVVIESSNLFNCFKGVY
ASQAADYYNVAAAS------
-----FPGSYYAAAASSAKA
FAAVASQYGNIQSQQHPQNY
PANFLSMNNKYPHSILMDQQ
-----------SIATGSELD
TSPPLGTLNNETATISSPPL
EMSNSHNNGNIKSNKSRNKG
ENKCGGSSLNTKRSKKKKIS
AIRSHSQELNQTRVFVWELE
DICSILPQHNSYKISLEQML
NMALTKLLEYGFNLDNFDDF
DQSNIMDAQMDEALQNAANN
SSSTLNQNSFSDEINIPIND
SSTIP------TSSSNLNKQ
IGMSATDGLRKLAEKCRNIR
DVFERYRDLPSFAELLERCG
-LSSNELLNYLDNIEKLPEA
N--IALYRDCLSFIHRRSQL
LPNNCVNVILSFNQIEGGVA
GALGRLMLCRMSEYIEAENV
FCITRNGREAVLERLINQFQ
KKLIVLITTNEESRKLAEK-
--------------------
--------------------
--------------------
--------------------
---------
>Minc11855_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MFTRCNH
ESHRQSEYFSLIKALARNLE
E-------------------
--------------------
----------SSEDREGDNI
IAKGNKLVQEGNKLIEEGNK
IKKK-----------NISKK
LLQDICSCVKPGSFMYESSR
EPESSATSS---QVLV-QK-
-----KKYIFVWELTMPDVN
---ILLYKESFNLVNEGG--
----HQNVIFSNKTPCATIA
GALGRLLLYRMGEYVEAENV
YCIEN---LLEFKQIIGIFQ
KDSIIIVTRNIETKQFAFQH
-----SIQ------------
--------------------
--------------------
--------------------
---------
>Minc09977_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MYESNREPESS
ATSSQVLVQKKKYIFVWELD
NWVFLDKYHSQFLQIWDKLQ
RP------------------
---------LNMLLRNLFGI
SDFKSFNFTNILDVPNIGFR
IPHS----------SSNVEH
GTLNTSSNLRYMTEKLKQIQ
ALYKYFKKLSLFEDLLKNCG
-INSAEFIKFFDNFETMPDV
N--ILLYKEIFNLVNEGG--
----HQNVIVSNKTTCATIA
GALGRLLLYRMGEHVEAENV
YCIDN---SLEFKQIIGKFQ
KDSIIIVTRNIETKQFAFQN
RLPCWFITKNVDLLNLYNEI
KFLVSQNVSILTGLPFKKLC
EFCNKEIEKEIYLVHYIRCK
YIHTTQVTSSSSPLAKKLHH
S--------
>Mh10g200708_Contig2022_4785..7717_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MSAGGDKNVAKDIQRKEVE
AMIGPLFDYLEEYNKASD--
--------------------
----------------ESTS
ILDEANMMSEEAHN------
---------LYEEAHKLSKK
AEKLAGDAKVLADKSKKRID
FYKILN--------------
--------------------
--------------------
-------------EGSAKQV
QMARDFLTKSQNYESTSADA
IDTSHSQVKNEQFVFVWNLE
NVCSILPPNSSHLQMFGNKM
LDALKKLLTFGFG-------
--------LKGCEVDRNILT
ESAFQYSVGSSSTMNLPPMR
VEAP---------GQHITST
SSSIQSASSSLDTGTSGKIY
NFFERYKKLSAFEGLLKHCK
-LNANELMPYLDNIEKLPEA
N--IALYRQCFQVIYESG--
----HVNVIITST---ARLA
GAFGHLLIYRLGEFVEANNV
FLYNENNEEVVLQQLANKFQ
TGFMLFVTANAKIIQLADSN
GILRYFLGSNDDLVKFHRNL
LDFLVDISPNQPAPQLKEPS
GVFICERCNKAIPIKHTDLH
YFLCDRVLIKERSCEGEEAP
PKAKKSKNV
