>12601.m00330_BMA1.short_headers.longest_isoform.pep_
--------------------
---------------MDPNK
PQYFIHPYDPANLSGAKASD
SGRKSKNCRKSEDCGEKLQV
ISGSPL----AVVAAVQKAQ
QQHVAATLTSSGAPVTVNI-
---DIQALTDMAHREYQAGD
YANAEQHCVTIWRADPNNVS
VLLLLSSIHFQLKDLDKSMQ
FSTMAIKANPKCAEAYSNLG
NVYKERNQLAEALENYKIAV
SLKPDFIDGYINLAAALVAT
GDLDQAVNAYVSALQYNPDL
YCVRSDLGNLLKAMGRLEDA
KVPLYIDVQARFVQGIVNST
ELLGCYLKAIETQPQFAVAW
SNLGCVFNAQGEIWLAIHHF
EKAVQLDPNFLDAYINLGNV
LKEARIFDRAVAAYLRALNL
AGNHAVVHGNLACVYYEQGL
IDLAIDMYRKAIDLQPNFPD
AYCNLANALKEKGLVSEAEA
AYNKALQLCPTHADSXNNLA
NIKREQGKIEDATRLYLKAL
EIYPEFAAAHSNLASILQQQ
GKLQDAINHYKEAIRIAPTF
ADAYSNMGNTLKEMGDVGGA
LXCYTRAIQINPGFADAHSN
LASIHKDSGNVPEAIQSYST
ALKLKPDFPDAFCNLAHCLQ
IICDWNDYDNRMKKLIAIVD
DQLQKKRLPSVHPHHSMLYP
LTHAVRMAIAAKHAQLCIEK
--VQICHKAPYIYPDRNSVR
KGQ--RLRIGYVSSDFGNHP
TSHLMQSIPGMHNRENVEVF
CYALSPNDGTNFRQKLMNES
EHFVDLSQITCNGKAADRIH
DDGIHILINMNGYTKGARNE
IFALRPAPIQVMWLGYPSTS
GAPFMDYIITDSVTSPLELA
HAYSEKLAYMPHTFFIGDHA
QMLKHLTERVIVKEKNDPTP
IDKETV--TVVNSVN--LEP
LLSK--AEVKPFVREAEVAH
GPERDMIKTEVVLPVIEVPT
T-EPLKQMIGSGMXAGNVEG
-VPVQNGLTTLN--------
-------QTHVKAATGEEVP
HTILVTSRQQYGLPDDAIVF
CNFNQLYKIDPPTLSMWCDI
LKLVPNSILWLLRFPYHGEP
NVMRFCAERNIDTR--RIVF
SNVAAKEEHVRRGQLADVCL
DTPLCNGHTTGMDILWTGTP
MITMP---------------
---LETLASRVASSQLYALG
VPELVAKDREDYIKIAKRLG
TDREY---------------
------LSQIRAKVWKARTT
S-------TLFNVRQYCSDM
ERLLHKMWKRY---------
-------------------A
DGLSPDHILSDREGRDPNDR
TN----------
>Minc14436_MiV1A1.short_header.longest_isoform_
--------------------
---------------MDSNS
SKQLYN------------FS
TSTFDKVLQNTTSGSHKIIP
QLQIQQ----GTSSAILTQG
QILNPQNIIVVSSNTVGAV-
---DASALLSIAHKEYQAGN
YAKAEQHCLALLQQNSHNIG
VLLLLSSIAFQQKNYERSMQ
YSNLAIRVNPECAEAYSNLG
NAYKEKGDLTEALKNYHIAV
RLKPDFIDGYINLASALVYV
GDLEQAIQAYLTALQYNPDL
YCVRSDLGNLFKAMNRFEEA
K-------------------
---VCYLKAIEMQPHFAVAW
SNMGCVFNAQGELWLALHHF
EKAITLDPNFIDALINMGNV
LKEARIFDRAVSCYLRALAL
NPNHAVVHGNLACVYYEQGH
LDLAIETYKRAIELQQNFPD
AYCNLANALKEKGLVIEAEQ
AYNTALTLCPNHADSLNNLA
NIKREQGKIEEATRLYLEAL
KIYPEFAAAHSNLASILQQQ
GRLQDAIEHYKEAIRISPTF
ADAYSNMGNTLKEMGDVNGA
LQCYTRAIQINPAFADAQSN
LASIHKDAGNIPEAIQSYST
ALKLKSDFPDAFCNLAHCLQ
IICDWTDYNSRMKKLVTIVE
DQLQKKRLPSVHPHHSMLYP
LSHEQRKAIASRHAQLCIEK
--IQVLHKPPYNFSDRFNIR
MGKNNRLKIGYVSSDFGNHP
TSHLMQSIPGMHDRSRVEVF
CYALSPNDNTNFRQKIMQES
EHFIDLSSMPCNGTAADRIN
KDGIHVLINMNGYTKGARNE
IFALRPAPIQVMWLGYPGTS
GAPFMDYIITDAITSPIELA
HAYSEKLAYMPHTFFIGDHV
HMLAHLTERVIVKDK-DGQL
PERDCL--TVVNATQNALQP
LLSSSACEVKTFVREAEVQH
GPEREFKMTEVVVPVVEVTS
T-EPLSQMIGNGLIAANVSG
-VPIQNGLTTLN--------
--------THVKAATGEEIP
QTILVTSRQQYGLPDDAIIF
CNFNQLYKIDPPTLEMWCEI
LKQVPNSVLWLLRFPYHGEQ
HVIRFCAQRGINTK--KIIF
SNVAAKEEHVRRGQLADVCL
DTPLCNGHTTGMDILWTGTP
MVTMP---------------
---LETLASRVASSQLHALG
CPELVARDRDDYIRIATRLG
NDREF---------------
------LNQTRAKVWKARTT
S-------TLFDVKQYCTDF
ENLLYRIWKRY---------
-------------------E
DGLPPDHILN------SSE-
------------
>Mh10g200708_Contig1743_4441..10011_M_hapla.pep_
--------------------
---------------MDSNS
SKQLY------------NFS
TSTFEKVLQNTTSGAHKIIP
QLQIQQ----GTSSAILTQG
QILNPQNIIVVTSNTVGAV-
---DASALLSIAHKEYQAGN
YAKAEQHCLALLQQNSHNIG
VLLLLSSIAFQQKNYERSMQ
YSNLAIRVNPECAEAYSNLG
NAYKEKGDLTEALKNYHVAV
RLKPDFIDGYINLASALVYV
GDLEQAIQAYLTALQYNP--
------------AMNRFEEA
K-------------------
-----------------VAW
SNMGCVFNAQGELWLALHHF
EKAITLDPNFIDALINMGNV
LKEARIFDRAVSCYLRALAL
NSNHAVVHGNLACVYYEQGH
LDLAIETYKRAIELQPNFPD
AYCNLANALKEKGLVVEAEQ
AYNTALTLCPNHADSLNNLA
NIKREQGKIEEATRLYLEAL
KIYPEFAAAHSNLASILQQQ
GRLQDAIEHYKEAIRISPTF
ADAYSNMGNTLKEMGDVNGA
LQCYTRAIQINPAFADAQSN
LASIHKDAGNIPEAIQSYST
ALKLKSDFPDAFCNLAHCLQ
IICDWTDYNARMKKLVSIVE
DQLQKKRLPSVHPHHSMLYP
LSHEQRKAIASRHAQLCIEK
--IQVLHKPPYNFSDCFNIR
MGKNNRLRIGYVSSDFGNHP
TSHLMQSIPGMHDRSRVEVF
CYALSPNDNTNFRQKIMNES
EHFIDLSSVPCNGTAADKIN
KDGIHVLINMNGYTKGARNE
IFALRPAPIQVMWLGYPGTS
GAPFMDYIITDAITSPIELA
HAYSEKLAYMPHTFFIGDHV
HMLAHLTERVIVKDK-DGQL
PERDCL--TVVNATQNALQP
LLSSSACEVKTFVREAEVQH
GPEREFKMTEVVVPVVEVKS
T-EPLSQMIGNGLIAANVSG
-VPVQNGLTTLN--------
--------THVKAATGEEIP
QTILVTSRQQYGLPDDAIIF
CNFNQLYKIDPPTLEMWCEI
LKQVPNSVLWLLRFPYHGEQ
HVIRFCTQRGINMK--KIIF
SNVAAKEEHVRRGQLADVCL
DTPLCNGHTTGMDILWTGTP
MVTMP---------------
---LETLASRVASSQLHALG
CHELVARDRDDYVRIAVRLG
NDREF---------------
------LNQTRAKVWKARTT
S-------TLFDIKQYCTDF
ENLLYRIWKRY---------
-------------------D
DGLPPDHILK------TSE-
------------
>Sjc_0041880_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
-----M----ATALNDILFR
LSRSSGNMIERRS-ILRLT-
---DVSSLAELAHREYQAGD
YERAEQHCMQLWHQDPENTS
TLLLLSSIHFQCRRMERSAY
FSQLAIKQNPLMAEAYSNLG
NVFKERGQLKEAIDNYRHAL
RIKPDFIDGYINLAAALVAA
GDMESAVNAYATALQYNPDL
YCVRSDLGNLLKALGRLDEA
K-------------------
---SCYLKAIETCPTFAVAW
SNLGCVFNAQNEIWLAIHHF
EKAVTLDPTFLDAYVNLGNV
LKEARIFDRAVAAYLRALTL
SPNNAVVHGNLACVYYEQNL
IDLAIDTYKRAIELQPNFPD
AYCNLANALKEKGKVSEAEE
YYNTALRLCPTHADSLNNLA
NIKREQGKAEEAIRLYVRAL
EIYPEFAVAHSNLASMLQLQ
GKLQEALLHYREAIRISPTF
ADAYSNMGNTLKELQDVQGA
MQCYQRAIQINPAFADAHSN
LASILKDSGNLSEAITSYKT
ALKLKPNFPDAFCNLAHCLQ
IVCDWSDYKHRMKKLVSMVQ
DQLESNRLPSVHPHHSMLYP
LTHDQRKKIAGKHASLCLEK
--VSLLHHQPFRFQKKLPAG
QR----LRIGYVSSDFCNHP
TSHLMQSIPGLHDRTKVEVV
N-----------------EA
EHFVDLSGIQCHGKAADKIA
SDGIHILLNMNGYTKGARNE
IFALKPAPIQAMWLGYPGTS
GSTFMDYIITDMVTSPMHLS
HQYSEKLAYMPKTFFIGDHQ
QMFPHLRNRVILESAEDASA
GRRVVDNSIVVSGLD--IKP
LLQVACVREVTYGGRLVEVH
GNQRKEVSYFTKITVLTIPS
L-QPIQNMIRTNSPSCTING
-VTIHNGLVTQ---------
-------QTQSKASAGEEVP
RDLILTSRQHYGLPEDAVVF
CNFNQLYKVDPSTMRMWVEI
LKGVPNSVLWLLRFPAAGEA
GALAAASEMGLQQVNRRILF
SNVAPKEEHVRRGQVADICL
DTPLCNGHTTGMDVLWAGCP
VVTLP---------------
---LETLASRVAASQLHTLG
CPELVANSQEDYVRIATKLG
NNREY---------------
------LQAMRAKVWKARES
S-------PLFSCRSYTADI
EALYFRMWQQY---------
-------------------E
AG-SIDHIVEWP-PKSSKES
T-----------
>Smp_046930_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-----M----ATALNDILFR
LSRSSGSMIERRS-ILRLT-
---DVSSLAELAHREYQAGD
YERAEQHCMQLWHQDPENTS
TLLLLSSIHFQCRRMERSAY
FSQLAIKQNPLMAEAYSNLG
NVFKERGQLKEAIDNYRHAL
RIKPDFIDGYINLAAALVAA
GDMESAVNAYATALQYNPDL
YCVRSDLGNLLKALGRLDEA
K-------------------
---SCYLKAIETCPTFAVAW
SNLGCVFNAQNEIWLAIHHF
EKAVTLDPTFLDAYVNLGNV
LKEARIFDRAVAAYLRALTL
SPNNAVVHGNLACVYYEQNL
IDLAIDTYKRAIELQPNFPD
AYCNLANALKEKGKVLEAEE
YYNTALRLCPTHADSLNNLA
NIKREQGKAEEAIRLYVRAL
EIYPEFAVAHSNLASMLQLQ
GKLQEALLHYREAIRISPTF
ADAYSNMGNTLKELQDVQGA
MQCYQRAIQINPAFADAHSN
LASILKDSGNLADAITSYKT
ALKLKPNFPDAFCNLAHCLQ
IVCDWSDYKHRMKKLVSMVQ
DQLESNRLPSVHPHHSMLYP
LTHDQRKKIAGKHASLCLEK
--VSLLHHQPFRFSKKLPAG
QR----LRIGYVSSDFCNHP
TSHLMQSIPGLHDRTKVEVF
CYSLAPDDGTNFRAKVANEA
EHFVDLSGIQCHGKAADKIA
SDGIHILLNMNGYTKGARNE
IFALKPAPIQAMWLGYPGTS
GSTFMDYIITDMVTSPMHLS
HQYSEKLAYMPKTFFIGDHQ
QMFPHLRNRVILESAEDAAA
GRRVTDNSIVVSGLD--IKP
LLQVACVREVTYGGRLVEIH
GSQRKDVSYFTKLTVLTIPS
L-QPIQNMIRTNSPSCTING
-VTIHNGLVTQ---------
-------QTQSKASAGEEVP
RDLILTSRQHYGLPEDAVVF
CNFNQLYKVDPSTMRMWVEI
LKGVPNSVLWLLRFPAAGEA
GALAAASEMGLQQVNRRILF
SNVAPKEEHVRRGQVADVCL
DTPLCNGHTTGMDVLWAGCP
VVTLP---------------
---LETLASRVAASQLHTLG
CPELVANSQEDYVRIATKLG
NNREY---------------
------LQAMRAKVWKARES
S-------ALFSCRSYTADI
EALYFRMWQQY---------
-------------------E
AG-SIEHIVEWP-SKPNKES
T-----------
>K04G7.3a_wormpep204.longest_isoform.pep_
MEKPNYFQSYNKVIGATGEQ
LAPGAVPPHPVLAPSIAPGG
VAGVSAANMANIMQTPGFAN
LVQQAIRTQLENQAAQQLAV
NQQFQLNGATAVQQQLLLTP
QQSLAQPIALAPQPTVVLNG
VSETLKKVTELAHRQFQSGN
YVEAEKYCNLVFQSDPNNLP
TLLLLSAINFQTKNLEKSMQ
YSMLAIKVNNQCAEAYSNLG
NYYKEKGQLQDALENYKLAV
KLKPEFIDAYINLAAALVSG
GDLEQAVTAYFNALQINPDL
YCVRSDLGNLLKAMGRLEEA
K-------------------
---VCYLKAIETQPQFAVAW
SNLGCVFNSQGEIWLAIHHF
EKAVTLDPNFLDAYINLGNV
LKEARIFDRAVSAYLRALNL
SGNHAVVHGNLACVYYEQGL
IDLAIDTYKKAIDLQPHFPD
AYCNLANALKEKGSVVEAEQ
MYMKALELCPTHADSQNNLA
NIKREQGKIEDATRLYLKAL
EIYPEFAAAHSNLASILQQQ
GKLNDAILHYKEAIRIAPTF
ADAYSNMGNTLKEMGDSSAA
IACYNRAIQINPAFADAHSN
LASIHKDAGNMAEAIQSYST
ALKLKPDFPDAYCNLAHCHQ
IICDWNDYDKRVRKLVQIVE
DQLCKKRLPSVHPHHSMLYP
LSHAARIAIAAKHASLCFDK
VHVQMLGKTPLIHADRFSVQ
NGQ--RLRIGYVSSDFGNHP
TSHLMQSIPGMHDRSRVEVF
CYALSVNDGTNFRSKLMNES
EHFVDLSQIPCNGKAAEKIA
QDGIHILINMNGYTKGARNE
IFALRPAPIQVMWLGYPSTS
GATFMDYIITDAVTSPLRLA
NAFTEKLAYMPHTFFIGDHA
QMLRHLTDKVVVKDKETTER
DSCL-----IMNTAN--MDP
ILAK--SEIKEQVLDTEVVS
GPNKELVRAEMVLPVLEVPT
E--PIKQMIMTGQMTMNVME
DMNVQNGLGQS---------
-------QMHHKAATGEEIP
NSVLLTSRAQYQLPDDAIVF
CNFNQLYKIDPSTLDMWIKI
LENVPKSILWLLRFPYQGEE
HIRKYCVERGLDPS--RIVF
SNVAAKEEHVRRGQLADVCL
DTPLCNGHTTGMDILWTGTP
MVTMP---------------
---LESLASRVATSQLYALG
VPELVAKTRQEYVSIAVRLG
TDADH---------------
------LANMRAKVWMARTS
S-------TLFDVKQYCHDM
EDLLGQMWKRY---------
-------------------E
SGMPIDHITN---NTETPHG
L-----------
>TS_TRISPI_Contig0.g.SNAP.13_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MFPECLCGRSAQ
FCSMAIKANPVCAEAYSNLG
NVFKERNQLPEALENYRHAI
RLKPDFIDGYINLAAALVTA
GHLEQAVQAYATALHYNADL
YCIRSDLGNLLKAMGRLEEA
KLTELSS-------------
AELACYLKAIDTQPTFAVAW
SNLGCVFSAQGEIWLAIHHF
EKAVQLDPNFLDAYINLGNV
LKEARIFDRAVSAYLRALSL
SPNHAVVHGNLACVYYEQGL
IDLAIDTYKRAIELQPHFPD
AYCNLANALKEKGFVAEAEE
CYNTALNLCPQHADSLNNLA
NIKREQGFIEEATRLYIKAL
EIFPEFAAAHSNLASILQQQ
GRLTEAILHYKEAIRIAPTF
ADAYSNMGNTLKEMNDITGA
MQCYSRAIQINPAFADAHSN
LASIHKDSGNVPDAIQAYRT
ALKLKPDFPDAFCNLAHCLQ
VICDWTDYEARTTKIVAIVD
EQLRRNRLPSVHPHHSMLYP
LTHEQRKGIATRHAQLCIEK
--ISVLHKSSYVHPTALASG
ER----LRIGYVSSDFGNHP
TSHLMQSIPGMHNRKKVEIF
CYALSPDDNTNFRQKVSSQA
EHFVDLSQISDTGKAADRIA
MDKIHILVNMNGYTKGARNE
IFALRCAPIQVMWLGYPGTS
GASFMDYIITDRVTSPLHLA
HAYTEKLAYMPHTFFIGDHM
QMFPHLSERAILKGKDKPLD
PRKDN--VTVVNATN--LEP
IMSK--ADVKAFVRQAEVIH
GPEKEVKVTEVVVPVLEIST
T-APVETMFYTGQVQTSVEG
-VPVQNGVTALT--------
-------QTHIKAATGEEVP
QSILITSRHQYGLPEDAIVY
CNFNQMYKIDPMTLKMWCEI
LQRVPNSVLWLLRFPSHAEP
NVLKFCESQGVNTK--RIKF
NNVAAKEEHVRRGQLADLCL
DTPLCNGHTTGMDMLWAGTP
MVTLP---------------
---LETFASRVASSQLTALG
CPELIAKTREDYVNIAVRLG
TDFAENTGKSVEGSCGGVMN
RNFHRTTSLLKAIVLLSRSF
RGILELVFPLIAIKTEAITV
SRSSGQSHDHMSHNFKRDLI
ELLKLVADFRCFTLRDYLCK
KNEPKDHWLRTKSPTVFPHF
SSVQIFPVLCTL
