>TS_TRISPI_Contig0.f.SNAP.174_T_spiralis.071204.pep_
--------------------
--------------------
----MTNPKKVLRVNNTAKS
ECTEYTVFTIESDDTVQTHD
MSGEVVSFADAIGNVELLDE
IPLPDCQPVVEALPQTLRYR
ANFDANFEDRSAFITGISKY
IEEATRHAELNEILLEGERH
AINLYTWRCCSRAVPMAKSN
EQPNRAEIYDKIVEVLQPED
-----------RATKRFCEE
VKRLSHSEKRKDFVSEAYLL
SLGKLINMFAVLDELKNMKA
SIKNDYSTYRRAA--QFLQV
MSDSQTLQE----SQNLSMF
LATQNKIKDSLRSQLQAIEG
YDELLADVINICMHFYENHL
YVTPAEKHMLIK--------
--------------------
--------------QLEVVP
LFGDMQVMPFAFIKRCAS--
--------YEASRWPLASVE
STHCP-INIVELLRTFREEH
DEFVTRLARIHNKIAVYDKN
---VVRSVDENRHLTELALQ
GLQLLSSWTSTVLELYSWKL
LHPTDPHQSADCPPTAEEYE
RATRYNYSSDEKFAIIEIIS
MVKGLQSLMGKMEAEFQLAI
RKSVYYDTQEFVQITLREPL
RKATKNKKELIRT-ILQSVR
DTVIDS------------SN
APELYEDIY--GTRSRRDTG
SN------SVEFHIEPRAVP
PSSTQ---------------
----------LYMMRTMLES
LVSDRSSG--RKTIRKDIDG
QHLSIISEFLRNSHYWNALL
NFNEMLSMCCDMSQLWFREF
YLEMTMGQRIQFPIEMSMPW
ILTDHILQTKNPSYIECILY
QLDLYNDSAECAMTRFEKQF
LYDEVEAEVNLCFDQFVYRL
SVQIFSHYKQLAASMLLDKR
FKSDCSMHG-VNVPFVFS--
--TRY-ETLMKQRHFQLLGR
SIDLNRLLTQRINAFFLKSL
DLAINRFEATALTGIVELDG
LIHVNRLCHKLLKNHLQGLT
DFDDLYQEANHSISAPYGRI
TLHVFWELNYDFLTNYCYNG
STNRFVRSRASSNSASAAQR
DKPPQASAYFFWGSKAFNTA
FSNIYTMYCGFVGVPHFHAM
AKLLKYNGIAVILEELLKVS
ENLLQNSLLQPLKSVAKLIP
KVCRLPL--YDYGSPGVLAF
YYAQLKNLIHNNDLKMEIFQ
ACREMGNLMLFCLWLEKSLS
QEEVSDLLHAAPFQNIIPRP
YCKVHILLEIENEKPEMKIK
RLEQKYANLHVSNIMERYG-
---SEKQASIAQDCDLLTKE
RLCCGLSIFEVILMRIKSFL
------------------TD
PIWSGS--MLPANSVMTIDE
CSEFHRLWSALQFLYCMPPR
E-------------------
-------------------N
EITVEELFGEGLNWCGCALI
VLLDQRRRFEIVDFCYHILR
VQR-----VDGCDDIVPGVG
----QLTRMVERIRVFQILN
GCIFGVICKYLR-FGDFNDT
VPAERIKYFQPPLKQAVISS
LQ-----------
>14990.m07836_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
-MSGRTKVVFGSKSNIIG--
MASETVSFRDAVGNVDLLDD
LVLLDNQPCIEAQPIPLEYR
ISFNTNFEDRNAYVTGVSKY
IEEATRHAEFNGMLSEGFEH
AAHLYTWRCCSRAVPMAKSN
DQPNRVEINEKVVEVLNPEV
EKLHRFMHFANKAIARFCDE
MKRLCHPEKRKDFVSEAYLL
TLGKTLNMFAVLDELKNMKA
SIKNDFSTFRRSA--QFLQV
MSDTKTLHE----MQNLSMF
LATQNKIKDTLKSELQSIES
YEEILADVVNICVILFENHM
YITPAERHMFVKV-IAFALF
LMD------GDSANVSKLDQ
RKRISISKLDKIFQSLEVVP
LFGDMQIQPFSFVKRSPY--
--------FEPSKWPNAINE
GEKCH-VNITERLKTMREQH
LEYVTNLSRLNNEVAIYDRD
---GPRGDDENREMTRLMLS
GVQLLCSWTSDVVETVSWKL
LHPTDHRTNLACPETAEEYE
RATKYNYQPAEKAALIESVS
MIKSVQHMLSKMEPILSVAV
RKHIYAEMQDFVQITLKEPL
HKAVKNKKDLLVG-IIQSIC
DTCVDN---C--------AG
NFDPHSVEMGKPKKQRHSAV
GS------ISDIRATRRSVA
PSSTQ---------------
----------LYMARTMTES
LISERSGS--KKILRKDIES
KYIERLANFLRISFHWPALL
AFSETLSECCELSQLWFREF
YLEMTMGRRIQFPIDMSMPW
ILTDYILTSQDPALIESIFY
QLDLYNDAAHYALKKFKKQF
LYDEVEAEVNLCFDQFVFKI
SDAVFTYYKQLASNMLLDKR
FKADCQALG-ITIRAPPH--
--CRY-ETLLCQRHVQLLGR
SIDLNRLVSQRINTSLIRAI
DVAISKFESEELSSIVELDN
LLETNRLCHRLLSEQLGSIS
DFNELLCEANHSVSAPYGRI
TLHVFWELNYDLIPNFCYNG
STRRFVRSLVKDPKRKVPQR
ERPPSAAVHYFWGSKSLHAA
FTNLYSLYSGFIGLPHLKAV
TRLLGYQGIAVILEELIKIV
RNLVNGPLRGHVRSIFNLMP
KVCKLPR--FDYGSPAVLEY
YVAHLANVGRYTELKKDVCQ
VFRELGNIIVFCLQLELALT
QEEVMDLLTAAPFTNVIPRP
PAK-------KVEEQELKMK
QLEQKYARIQISAIAEQIG-
---DEKQKAIAREAELLTKE
RLCCGLNIFEMFILKFKKIL
S-----------------MD
TIWSG---GFPSNGVMWLDE
CVEFHRLWSALQFFFCQPPL
LGQ-----------------
-------------EGLNPVT
EPLIEALFGDGLHWAGCAII
TVLNQHRRFEVLDFSYHLLR
VHR-----ADGKDNIVHGI-
----KLSRMVERIRRFQLLN
NQIFVVLNNYLNSLCENGEE
LMEEQVREFAPPIHHSVSHN
FVPND--------
>F56A11.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-MNANVTVDDAISNVNLLDT
LAIPDDLPDIEARALPLLYR
SNFDTNFEDRSAFVTGIAKY
SEEATRHAQFNDMLSEGLQH
AANMYTWRCCSRAVPMAKSN
DQPNRTEINEMVVEVLKPEV
SKLGSFMRFTLTAIQRFCEE
VRRLCHSEKRRDFVSEAYLL
TLGRFINMFAVLDELKNMKA
SIKNDFSTFRRAS--QFLTA
MSDTQAVHD----MQNLSMF
LATQNKIKDDLKLQMKTIEG
YEELLCDVVNICAHMYEHQL
YLSPNEKHMFVKV-IAFSLF
LMD------GDAANVAKLDQ
KKRLSISRLDKIFKTLEVVP
LYGDMQIQPFAFVRRSSH--
--------YEPSKWPLSDKE
SDRCH-VNIVEKVQSIRSDH
ESYVTQFAKINNEVAICDRP
-----GNDSENREITSLALS
GIQLLCQWSCAVVETISWKL
LNPTNPKDNRECPENAEEYE
RATRYNYSPAEKTALIQIIA
MIKGLQSMLGKTESDMSNST
RKCVYVELQAFIHHTINEPL
QKAVKHKKDLLAS-ILQSVK
DSISDAGNEL--------NR
MTDVKGKKKSSAPKGDSANS
S-------SSDIRIPRRTAA
PGSTQ---------------
----------LYMARTQLES
LISDKLCGG-KKILRKELDS
KTIEKISVFLRKSAHWPALF
RLSDSMTEAGELSQLWFREF
YLEMTMGQRIQFPIEMSMPW
ILTDYILSCNEPSLIESALY
QLDLYNDAAQYSLFNFNKQF
LYDEVEAEVNLCFDQFVYKL
SEMVFTHYKQLASCMLLDKR
FKAEILRSG-TMIRSPSA--
--ARF-ESLLQQRHVQLLGR
SVDLNRVVSQRVNMALLKAL
DAAIWKFESEPLSSIVELDM
LIDTNRLCHTLLSDVLHSIA
PFDDLFQEANHAVNSPHGRI
TLHVFWELNYDFVPNFVYNG
STHRFVRARHV--FRKTPAR
EKPPQVGQVYYWGSKSLMAA
FMNICNAYSQCIGTQHLKAI
TRLLHYQGIAVILDELLKMT
NRLLNDKIRRHVRNVFNMMP
KVCKLPR--SDYGSNALLQY
YVHHLEAVGKYPELKSEFCQ
DLRELGNMIVFCQQLEVALG
QEEAHDLFLAAAYTGTVPQP
PAR-------NAQEQMKQLA
KLEDKYSRIHLTEIIDKISP
---DDGQAAIAKDAELMTKE
RLCCGLNAFENFLVRIKQML
A-----------------AD
DIWTG---GYPTNGVFWIDE
CVEWYRVYSALQFFLCQPTR
DD------------------
-------------------N
EVYAEELFGDSLQWGGLTLI
TLLGQHRRFEVLDFCYHLHR
VNK-----ADGKDEVISGI-
----RLAKMVERIRRFQLLN
NQIFIILENQLN---EN-ND
DPNERVREFAPPVHPNYANH
AARRQ--------
>Minc15996_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
-----------------MTS
LNQDSVNYQNAIHNVQALDD
LQIVDDQPCIEGNSQPLQCF
ASLDTKFEDRGAFITGCSKY
IEEANRQAEFNEMLNKGFQH
AANLYTWRCCSRAVPMPRSN
DQPNRVEINEKIVQVLGPEV
QKLNEFMKFASLSIDRFIEE
FQSISHPEKRKDFVSESLLL
MIGKLLNMFVVLDALKDMKA
SIKNDLSTFHRAS--QSP--
-------------EHSLTLF
LATQNRIKQTLREKIQKIDA
FEEVLADLINLSVHFFEQKL
YTSPEEKHTHVKV-IAFCFY
LMN------VEIYN--KLEQ
KKRIFIQKIDKIFKSVEVVP
LFGDMNILPFTFVSQCKHPN
QCVGQCKCYDPNKWPLSNIE
AEKCH-VNIINKLNQIREQH
DQYITHLGKIRNEFSIYNRK
---GPLNDNENKEIAELTLN
GLQLICFWTSDVVETIAWKL
LNPSNHRKNPECPENAETYE
LATKYNYNNEEKSAIVEIIS
MVKGIQSLLGQMEDEFCVAI
RQHIYVEMRDFVGGTLIELQ
TKALKHKKDVLSC-ILTAII
ETCSDQSMIVGNQLGKFSSR
SSELSSSSK-LLKKGKKLEN
NIGS----MPDLRVGRRNVV
PSNTQ---------------
----------LYLARTMLES
IIYEKSASTGRRVYKKEIDE
KYREKMINFLRSSYFWPILL
EFKFSLEKCADLSQLWFREF
FLEMAMGTRIQFPIDMSLPW
IFVNFILDSFDSSLLECVLF
QLDLYNDAASFALKMFKKQF
LYDEVEAEVNLCFDQFIYKL
SEAVFTHYKQLAATMLLDKE
FKSDCTQY--FTIRTPSA--
--VKF-ETLLRQRHFQLLGR
SIDLNRLISQRINSCILRSL
ENAITKFESEGLYFIIVLDN
LLEVNRLCHRLLNENLGSLA
NFDDLFFEANRQVSSQNGRI
TLHIYSELNDDLFPNFCYNT
TTKRFVRGKVN--YRNPPDR
GRPPTVAAQYEFGSKSLNAA
FYNLSMMYSGFIGIPHFRVI
AKLIGYQGISAILGDLLSSA
RRLLNDQIKTHVRVLFGLAP
KQCKLQR--FDYGIEGNLQY
FVHQLKTFSGYIHLHKEFCQ
SLREFGNIVTFILGLEMGLA
HEEMFDLLAASTFTGQIPKP
YAK-------SSEERELKIQ
RLEVKYSRLQISSICQQFG-
---TESQAKVAAESELLTRE
RLCCGLNIFGMILNRLRDTL
L-----------------AD
PIWIG---PKPSNGVMWIDE
CVEFHRIWSSFQFILCLAYF
NQTNINQNSGQSTEDIYSTL
KKGTTTNVNNSPTIVESLWQ
GLSIEELFGDGIYWAGCLLI
RLLGQHRRFEVLDFCYHLLR
VNRTVGAQIEGKEHVELGFS
QQKIGISQLIDRIRRVQAQN
NQLFTILNNYVI------NE
NNEQTIRHFPPPIYQPQSQH
YGNGET-HEGSAL
>Mh10g200708_Contig588_2388..8084_M_hapla.pep_
--------------------
--------------------
--------------------
-----------------MSS
LNQDSANYQNAIRNVQALDD
LQIIDDQPCIEGNSQPLQCC
ASLDTKFEDRGAFITGCSKY
IEEANRQAEFNEMLNNGFKH
AANLYTWRCCSRAVPMPRSN
DQPNRVEINEKIVQVLGPEV
QKLNEFMRFTSSSIDRFIEE
FQSICHPEKRKDFVSESLLL
MIGKLLNMFVVLDALKDMK-
--------------------
--------------------
-----------------IDA
FEEVLADLINLSVQFFEQKL
YTSPEEKHTHVKV-IAFCFY
LMN------VDIYN--KLEQ
RKRISIQKVDKIFKSVEVVP
LFGDMNILPFTFISQCKHPN
QCVGQCKCYDPNKWPLSNIE
AEKCH-VNIINKLNQIREQH
DQYITHLGRIRNEFSIYNRK
---GPLNDNENKEIAELTLN
GLQLLCFWTSDVVETIAWKL
LNPSNHRKNSECPENAETYE
LATKYNYNNEEKSAIIEIIS
MIKGIQSLIGQMEDEFCIAI
RQHIYVEMRDFVGGTLIELQ
TKALKHKKDVLSC-ILTAII
ETCSDQSMIVGNQLGKFSSR
SSELSSSSK-LLKKGKKLEN
IG-S----MPDLRVGKRNVV
PSNTQ---------------
----------LYLARTMLES
VIYEKSGSTGRRVYKKEIDE
KYREK---------------
--------------------
----------MFPIDMSLPW
IFVNFILDSFDSSLLECVLF
QLDLYNDAASFALKMFKKQF
LYDEVEAEVNLCFDQFIYKL
SESVFTHYKQLAATMLLDKE
FKSDCTQY--FTIRTPSS--
--VKF-ETLLRQRHFQLLGR
SIDLNRLISQRINACILRSL
ENSIAKFESEALYFIIVLDN
LLEVNHLCHRLLNENLGSLA
NFNDLFSEANRQVSSQNGRI
TLHIYSELNDDLFPNFCYNT
TTKRFIN------YRNPPDR
GRPPTVAAQYEFGSKSLNAA
FYNLSMMYSGFIGIPHFRVM
AKLIGYQGIAAILGDLLSSA
RRLLNDPIKTHVRVLFGLAP
KQCKLQR--FDYGIEGNLQY
FVHQLRTFSGYTHLRKEFCQ
CLREFGNILTFILGLEMGLA
HEEMFDLLASSAFTGQIPKP
HAK-------SSEEQELKIQ
RLETKYSRLQISSICQQFG-
---TESQAKVAAESELLTRE
RLCCGLNIFGMILNRLRDTL
L-----------------AD
PIWIG---PKPSNGVMWIDE
CVEFHRIWSGFQFILCLAYF
NQTNINNQNSGQSTEDSTLK
KG-ITNVNNNSPAIVETLWQ
GLSIEELFGDGIYWAGCSLI
RLLGQHRRFEVLDFCYHLLR
VNRTVGAQMEGKEHVELGSQ
Q-KIAISQLIDRIRRVQAQN
NQLFTILNNYVA------NE
NVEQLIRHFPPPVYQPQSQH
YGNGETTHEGSAL
>Smp_150980.1_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
-----------------MEV
LQHLRGPTPTTVREVSALSQ
LSLDEDVPSIQGANFPILLQ
SNTDTNFSDITAFKSAFARS
AEDARVYSHLNTLLEQGQEY
AIMLYTWRSISRALPFIRSS
DQPNRIKIYEKTKEILEPHC
LKLKQFMFFQDAAIRRFVEE
VKRLAHKDQKNFFVNQAYLV
TLGKMIKMFALLDEMKNMKA
SMKNDYSNYKRCVHVNFLPI
IRAAQFLQVNDPDSHDVSIF
LAKQKIIRDTLKESLIAIDG
YEDLLIEIIHNSAQMYENKV
YILPEEKHTHVIVNLAFSLY
LLDSGRIVDGKQVGVCLNKI
AKRLNIGKLDRILKECEVVN
LFGDMSVEPFSYIRQTAS--
--------YDPSKWPECN-S
AKVSGQGVILTHMARFQEEY
TSLTSDLAWHTNTTSIRLNE
-----RSAKENQELYDLALR
GLQYLSGWSVQVLDTFSWKL
AHCASGFTNHECPKDAENYE
KATRYNYNSEERFAMIEIIS
MIKSVQTQLLRLEACYSEAI
GRSVYRELQAIVVGQLSAPL
LKAQKKKERIMLARLILAIQ
ATWSN-------------ST
MAAVAASL---ANNNDSPTG
SIST----SSIFDSNKRRVG
PSSSQ---------------
----------LYLVRTMLEL
MVEQVSSS--KQMIRKELDT
ATLSAIDTFLKHSFYWPYLL
NFSETLIKCCDLSQLWYREF
FLEMTNGACIQFPIEMSLPW
IFTDHILETEHPGYMEYLFY
MLDLYNDAADCALNRFRRRF
LYEEIEAEANLVFDQLVYKL
SDKIFRHYKRYASSILLDKR
FRAEAQRTASWREPYPPP--
--NRYTAALLRQRNIQLLGR
SIDINRLICQRMTTAIYKSI
EVAISRFHSSDITGIIELET
AIECNRLCHRMLSEQLE-LD
DFDALLREADNLVTSRLGKI
TVHVFWELTYDLVKNYCYND
ATNRFVPTNFT--LTEVLER
EKPPTVEAQYVWGSRSLNTC
FETIFKLYRGFVGAPHFSAI
CRLLGYRGLFVVTAEVMKVA
QSLLNQTLRDYVCRLVLLMP
KSLTLPS--EKAESDAVFSA
LYTQLQQIYKYTDLRTNVFQ
NFREFGNILICCLQLEKNLS
IEDSCDLRHAGPFIGQMPRQ
FFP-----------PIPSHE
ELQKKQESMNIVLVVSRIG-
---TEDQLSLAKENEILTKE
RLCSGLTLFEFVLNKIKNFL
HEEDSDGNTWNRLSNIAKRN
SICNGTTTHYNNNDILGLES
YTHFHRLWSAIQLVFCTPFG
Q-------------------
-------------------N
EYTIEEMFGEGLNWAGCAII
LLLGQQRQFEALDFGSLILR
LQR-----IDKKDVTPMGVS
-----LERMAARLSRFSVLN
RQIFSTLNVYLH-PVDR-LD
ESSVRVRQFPIPTWSKS---
-------------
>Sjc_0018280_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
---MLCGVGATRYNYNSEER
FAMIEIISMIKSVQTQLLRL
EACYSEAIGRSVYRELQAVV
VGQLSSPLHKAQKKKERIML
ARLIHAIQATCADQLSDTTD
--------------------
---LDMMHTSSGGNTTGSKS
WGKATSSKLSNSNNSNNNSM
TTGSNSTMAAVAASLANNND
SPTGSISTSSIFD-------
--------------------
--SNKRRVGPSSSQLYLVRT
MLELMVEQVTSSKQMMKKEL
DAATLASIDTLLKHSFYWPY
LLD-----------------
-------FSETLIKCCDLSQ
LWYREFFLEMTNGACLQFP-
-------IEMSLPWIFTDHI
LESEHPGYIEYLLYMLDLYN
DAADCALNRFRRRFLYEEIE
---AEGNLVFDQLVYKLSDK
VFRHYKRYASSILLDKRFRA
EAQRNASWREPYPP-PNRYT
AALLRQKNVQLLGRSIDLNR
LIC--QRMNSAIYKSIEVAI
SRFHSSDITGIIVDTLLSEA
FDLHPTDPRFQPCFICFVLA
VRFVPTN-----------FT
LTEVLEREKPPTVEAQYVWG
SRSLNTCYETIFKLYRGFVG
APHFS---------------
-------AICRLLGYRGLYV
VIAEVLKVAQSLSIEDSCDL
HHAGPFIG-QMPRQFFPPLP
THEEGLKGKSINEVRREREI
QYKELQKKQESMNIVLVVSR
IGTEDQLSLAKE---NEILT
KERLCSGLTLFEFVLNKIKT
FLHEEDTDGNTWHRLANIKR
SSICNGGTTHYNSSDILGLE
SNAHFHRLWSVIQLVFCTPF
GQNEYTIEEMFGEGLNWAGC
AIILLLGQQRRFEALDFGSL
ILRLQRIDKKDVTPMGVSLE
RMAARLSRFSVLNRQIFSTL
NIYLHPVDRNYESNVRVRQF
PIPTWSKSSMKTPN---KQQ
VVFGFLDTEEKYPTYYPLIT
TLTSMMEEVHELDKMTNGHE
HIPIVQLKKTIGLASSVTLI
VGSMIGSGIFVSPTGIMENV
RSIGASLIIWVACGLFSMLG
AYCYAELGTMIHRSGGDYIY
VYEAFGPFLGFLRLWSEVVV
ARPASVAIMSITFAKYIAQP
IFPDCDQPEIAIRLLAAVCI
VLLSFINAYSVRLSTFVQDI
FTYAKVAALVMIIITGFVQI
GFGKVDGLIGAFDNSDWSPS
ALTRGFYVGLFAYSGWNYLN
--------------------
CMIEEMNNPRRDLPLAIIIS
CLLVTFIYTMANVAYVTVVS
P-------------------
--------------------
---HEILTTPAVAICITSLI
YLLVGDIYSLITYLGFVQWL
AIG-------ACVFIVIVFR
----ITRRNHPRPVKAPILF
PIIYVLITLFLV--------
----IFAFIAAPTESCK---
-------------
