>TS_TRISPI_Contig20.SN.65_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MQKAIACSLKRDSDSR
ILLVTGCSGCGKTITVRLLC
EDMR--IRVVEWKGC-----
IDNGD--------------C
VISEQLRQFEEFLLRSSHYS
TIVQTDEYDN-----DYQDR
VILVKEILPVFTRDPSLLHQ
ILKKFWSTF--NIPVIFILT
E--DGSDGS--RAIFPPEVQ
QNLGISTVSFNAIPVTSIIK
HLKNILIQEAKQ-------L
NASTLKAVAEFSQGDLRMAV
NNLQLICQHD----------
--------------------
--------DTSAL-TPCYRD
NFCLLFPSLGKFLYDK----
--FGHS--------------
-----------------SQT
VVANSEQD------------
----ESSESVLPEDTCFSFV
DCLG-NWETME-ICHPYFAS
VGARAVSTFYTEKRPLR---
----FQQTRKPQDFLANKN-
-----------SNLVRHACV
PLRESVGGNILIDKSSFYAD
YLPYMISKSCLGTNHSSFHM
SCVALSG-------------
--------------------
-------------ALHDASK
LGEEEIN-------------
-ESEIIIEQFSDDES---
>F32A11.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MKAAEHDLL
TIELAPRRRDELQIHNKKIA
EVDHWLKNVFSESNKQLG--
VMYLTGPAGSGKSTTVEVMC
TEQN--IEIIEYSPEYLHNE
DFECE---------------
--KPDFTQLRRFLLRRHGS-
---LRGGGL--------KKR
LLLVTELPDQAYSDAEKFRE
DLSEVLQHI--WHPVIFCLT
NSIACWNLNP-DRLFTKDFN
IMNGIDTVTFNPVADSFMKK
ALVRASNCLSSP-------L
SDAKLNVIGEEAGGDLRIAM
NMLQMNSIGP----------
--------------------
---NADRRSGNSV-ICASKA
NREEAFHMIGRILYAKRVNP
NVPKPSR-------FSKRRR
KSAPIPEPLVRTELEHDPTD
IITMSSMTSEKLLDFLFQNE
PIFCSNISKYRYVAETFSMC
DFLTGDWTTRKSLPEDYVAQ
MATRSVMWNNYKEPRPG---
---TLFAVGRPLRSSLEKHT
ARTKLELQRLPMIGAKDYAA
LTCPYITIIKDIIDPQRIEY
FLSRPMDIN-----WQWGND
KIEEHLEKQYALDYKGRK--
--------------------
------------KHRLPLHK
APKPSGKIIEVVDLEEE---
-EEKFTIEESSDDSFEEF
>Sjc_0089280_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MRSKTKEWL
LRETSNSKTRTNYINIPDLW
FDSGFFIGQEDLAVHKDKLK
ELHTCINKSLT-TKKSIGGP
IILLTGPTGSGKTTAVQVLA
RSISDKVDVVEFLDEG----
--------------------
IGHEEYTEIERFVLSSGVYG
GRSVMAPNSGKCQESVPYPT
VMILENLPAAVAENPSRFHN
LLRLHSTRARVNCLLVLILS
SSSFFENDLCERIICPPALC
SELLIQRIEFNPVAPTIIIK
ALGRIGNHIAQQLG--IKLP
SRQLLQSIANDCSGDIRSAV
NQLHFQLTTD----------
--------------------
-----NGNWKNSM-LFSHRD
GTLSLYRTIGKILYCK----
--RQSIESDQIVPSLNEMGG
RLPSHLVAWRRPPLEFDLEE
ILDLCHIDGGHIVSWLHENY
PDFSRNMTGLELVSHQFSWA
DAYLTGGMNWQLCLTPASDS
FVSRKFKRPYNIASKHYPAL
VVARTILLADGIEDMSGSDF
SRNIKAFRSFRSPSTLFSWK
LCKEKLSTLDDIFLSSNSSS
PIWLIERMIRSRTVMVLDYL
PFMWKVLGETWFSQFGSSEI
LSPMCSFSSKIGHDFIGSFS
-----------RNPHHHIKK
IDGESFLLFDSVTTLDT--I
WRIMHLHKAIQPDQ----
>Smp_163190_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MSSESEE
SLECASQIT-----------
VMILENLPAVVSEHPSRFHN
LLRLHSTRACADCLLVLILS
SSTFTENDLCERIICPPTLC
SELLIQRIEFNPIAPTLIIK
ALSRIGNIMAKQFG--LKLP
SRQLLQSIANDCSGDIRSAV
NQLHFQLSSD----------
--------------------
----RGNWNNSTL-PYSHRD
GVLSLFRTIGKILYCK----
--RKPVSNEQIASSLNEKEG
ELPSHLVTWRRPPLDFDLEE
ILDLCHTDGGHIVSWLHENY
PDFSPNMTALELVSQQFSCA
DAFLTGGMNWQLGLTPASDS
FVSRKFKRPYNVASKYYPAL
TTARTILLADGVEDVSGSDF
SRNIKAFRSFRPPSTLNSWK
LCKQKLDTLDDIFLTSNSLS
PIWLVEHMITSRIDMVLDYL
PIMWKVLGEEWFSRFSKLVL
TSVT----------------
---------LLAIRITFLGC
MPLYHYDVIKLCATQH----
-EVTVILIPRPPYN----
>14517.m00088_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MQKKEGRCRTCK
LLLLTGPTGSGKTTAVKILC
RELK--LELIEWNCSESYDV
FYDPE---------GEEIVY
EENQASHIFYVAELIVRKFT
EFLKSSDRGS--IEKSVSQK
VILVEQLPNVFYQDPSILHA
TLGKTIKNT--VCMYIFIMS
DVDSCWYLSP-KRILPANIR
FQLGFDELSFNASATIFLSK
ALRRIASLLKVN-------A
SPSQIKKIAENSNGDIRTAI
HNLQLCIDGR----------
--------------------
------KKXXEIC-PLX-SS
TLVDPYHSLGKLLYAKR---
CDKADS-----DWKKAEGKL
KIALRKTYSRDFPPKDDVSE
VLDKSGMNADKLVMFLHEHE
PNFAPSLSSYLGILNNISLF
DSALSRWEVRM-------DS
VLSSYIGEVDDCR-------
--------TLPLIRLIQPRR
LNNYQYQVLVSMNSALCTNF
TVNQSPANKNSVTDDEENQF
DIEEIDLS------------
--------------------
--------------------
--------------------
--------------------
------------------
>Minc06943_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MAGF
FSNPFQQKKPIKRRSRVLNN
LDCIVPNSEEELALHPKKLD
ELKQWFRSKMG---ICRGSK
TLLLTGPSGSGKRTAVRVIA
AELG--IEVTEWDWTDDCNN
LNNNR---------------
-RRSFSAEGFAQFLNDTQFS
SIQRMSLKH----------R
LLLISQLPSEFLNEPKLLHQ
LLASKISLY--RCIIVFVLP
NVDSCWSLSP-FRIFPQSIL
DVLGIEHIKFNPISISLLTN
ALQKASKKLCNS-------Q
QGIDVKNIANSSFGDIRRAM
NLLLLHYRQQ----------
---NSKIIEGNSAKRSRLEK
LSNNSQQPSTSFF-SSNFAS
DQLELFHFIGKIMYAKR---
-AEKPTEK----WLENESKL
NFNLKRIYGRPLPPKDDLNK
LIETSPISPQLLSSYLFEHE
PRFGPSIKSISKIQQIISKL
DVLISSNYEQRNQMEKYMID
LSVRASLFHNYRPSTGDKQK
--WRFYQFEKPRLYDLRMQR
MEIKSRISALYPIGRTSDMS
IL--LLSLLPRISSICVNYS
QAELLEKLSLSFQSFI----
--------------------
--------------------
--------------------
--------------------
------------------
>Mh10g200708_Contig877_39131..42391_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MSGF
FNSFQLKKPIKRRWSRVLNS
LDCIAPNSEEEIALHPKKLD
E----------------GSK
TLLLTGPSGSGKRTAVRVIA
AELG--IEVTEWDWTDDCNN
SNNFD------------KSN
KRRSFSAEGFAQFLNDTEFT
SIQKMSLKH----------R
LLLISQLPSEFLNEPKHLHQ
LLASKISRS--RCIIVFVMP
NVDSCWSLSP-FRIFPQSIL
ELLGIEHIKFNPISTSLLIN
ALQRASKKLSNLQ-----EI
KGIDIKNIANSSFGDIRRAM
NLLFLHYRQQ----------
---NTKIIEGNSAKRLKTEK
LSNNCQQPSTSFFSSNFASS
DQLELFHFIGKIMYAKR---
-AEKPTK----EWLNNESKL
NLNLKRIYGRPLPPKDDLNK
LIETSPISAQLLSSYLFEHE
PRFGPSIQSISKIQQIISKL
DVFISNNYEQRSQMEKYMID
LSVRASLFHNYRPSTGDKQK
--WRFYQFEKPRLYDLRMQK
MEIKSRISALYPIGRTSDMS
IL--LLPLLPRISSICVNQN
QAELLEKLSLSSNRLFKFKI
SENSFNSNSFLQKEEKDLSK
NEEEDLIKMTEQLFDEKEEF
LNNNNSLNNSFNSFYSISSH
FDDDEGGKGEKEENDGFCYE
INEEEDEEDFDDNDI---
>Minc09739_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MAGF
FSNPFQQKKPIKRRSRVLNN
LDCIVPNSEEELALHPKKLD
ELKQWFRSKMG---ICRGSK
TLLLTGPSGSGKRTAVRVIA
AELG--IEVTEWDWTDDCNN
LNNNR---------------
-RRSFSAEGFAQFLNDTQFS
SIQRMSLKH----------R
LLLISQLPSEFLNEPKLLHQ
LLASKISLY--RCIIVFVLP
NVDSCWSLSP-FRIFPQSIL
DVLGIEHIKFNPISISLLTN
ALQKASKKLCNS-------Q
QGIDVKNIANSSFGDIRRAM
NLLLLHYRQQ----------
--------------------
--------NSKIIEGNSAKH
KQKWRFYQFEKPRLYD----
----------------LRMQ
RMEIKSRISALYPIGRTSDM
SILLLSLLPRISSICVNYSQ
AELLEKLSLSSNRLFKFKIC
ENSTPTNSSFLQKTEDLSAA
TNEEDLIKMTEQLFEDN---
------NLIKEEFQNSLNNS
FNSFYSISSFFDDEEGGGGG
KEGEENDGFCYEINEEEDEE
EDNDVGDFDF----------
--------------------
--------------------
--------------------
--------------------
------------------
