>14939.m00172_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MSQTGRLLP---
--------------------
--------------KPPKLE
GILAVNNILTKAEYLLKDKI
FGPESII-------------
-----VEKDKIVTGMQNGMI
ISAES------GVIRKSLTF
GSVNLD-LCDGRFDMEPKCG
RPLGLRRLNAET--ILAIDT
YFGIFSVNF---EKGQHMVI
LGNQTEVNGK---PMKFLND
IDV-VDRD-----VLIFTDS
SSKWDRRHFMNILLEG----
--------------------
---IPNG-------------
---------------RHWIA
GPRM----GETEIFIDNLPG
LPDNIRLGSNGT-FWIGLGA
VRHSDQFS--MLDFLADKPY
IRKCILQLVPE---------
--------------------
--------------------
-------------------R
QWEWLMSIFGTKHALILQLN
-EKGQIVASAHDPMGQIIKE
VSQVTEA-NEYLYLGSYRSP
FIARLRKDHIIY
>C08E8.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MTNSKKLSILEGQV
IGPESMV-------------
-----VDDEAIYVSVNDAKV
LKIVD------GKVRATAVY
SKNPIFPPNMTRFEAEAICG
RPLGIRKLVEGTKKFVLVDA
YLGVFIIDFSDELRPKSTQI
LDASKPIDGF---RPNFLND
LDVISED------ELIITHS
SIRHDCRHFFNLVLEHQGDG
RILHLKIST---GTVKVLAK
NLYFPNGIQLTPDKKS----
---AIFAECSMARIKKLDLE
---T----GKIDIFCENLPG
LPDNIRGTPRGT-FWVGLAA
TRSKNYPS--LLDRLGNWPG
VRQFFVDIVP----------
--------------------
--------------------
------------------AA
HWMKILVFSKHPHSIIVELD
-SNGKIIRSLHDVTGKHVSD
VSQVTEH-NGFLYLGSFADT
YIAKVEL-----
>F57C2.5_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MGKFFFFGF
VGLLLSWGALYYRYSD----
--EKNTSARKYRFDPPPALV
GNLFINAGLEKAEHILDGKI
VGPESMV-------------
-----VDDEAIYVSVNDAKV
LKIVD------GRVVSKASY
SEKSKFFPDCGHFDTEPECG
RPLGIRRLVAGKPKFVVCDA
YLGVYIVDFTDEQNPISTQI
LDSKVPIDGL---KPRFLND
LDVISED------ELIISDS
STRHDRRHFMAAILEHQADG
RIFHLKIST---KSVKVLAD
KLYFPNGIQLTEDKKS----
---VIFAECSMARIKKLTIA
S-------KKVEMFAANLPG
LPDNIRSSGRGT-YWVGLTA
TRSATHPS--LLDRLGSLPG
IRQFLVDIVPG---------
--------------------
--------------------
-------------------P
YWKPLLGLFKNPHSIIIELD
-SVGKIVRSLHDVTGKHVGD
ASQVTEH-NGHLYIGSFADH
YIAKVKL-----
>Mh10g200708_Contig1246_47374..49183_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MCPSQPPTPTRSKCAH
FWKTLIVVTAIFTALFGVLV
YLNEEFEPVVYRLPSPPSLK
GPLKPNNYLRNAQMLLKGQI
SGPESLVVEKD---------
-----GKKTIIYTGTWDGKL
LKIVN------GIVQTTLKI
KPGKKAFACGGTYHTEPKCG
RPLGIRRLNEKE--FIVAEA
YSGLYTVDF---EKGIVNQL
FPTEQTLDKK---NCHFAND
LDVLNGKNDSNAFTVFFSHS
STRWDRRRFLHDFFEGKSTG
RLIRVEFDVNLKPKASVALD
GLAFANGVQLHPDGES----
---LLVSECSRARIIRYFHS
GPKR----GQYSVFTKNLPG
FPDNIRLSSAGDSFFVGIAS
VRHSDQFIP-FIDFLGAHPW
IRWGIVQIVP----------
--------------------
--------------------
------------------QR
YLASLLTLISQKYGLVVELD
-LNGKIIRSYHDPTGTVIQG
VSQASDD-GDFLYIGSFHAD
YIAKVPKKG---
>TS_TRISPI_Contig1.b.SNAP.3_T_spiralis.071204.pep_
--------------------
--------------------
----------------MEVR
HRCVP---------------
-------------------S
TVRENAQHPSS---------
----QTLEKKPQLNEFPKGT
FTSVRWIIAALSILLFIIVF
TPSVIEPEAYSLPPPPNINK
GILKKNNILSKSRSFLENEL
LAAESIVLQGSRLLLKIYVE
PLLTINIADYLYTGTADGRL
TEIVG------NKINEVIRL
GRK----TNCGMAFVDPNCG
RPLGIRYLGNRR--LLVVDT
FLGIFEVDFR---NKNYTQL
IKSGMYVEGE---PLKFIND
IDIFENY-------IFFTDS
STKWSIIDYKFIIIEAKKNG
RLLVLDRNTG---KIDVILR
NLFFPNGVQVAKNGKE----
---LFIAETGLARILKINLN
NFKHQ---QQSDLLIDNLPC
LPDNIRQSSLGE-LWIPCAA
VRDSTAFLGPTYDLIGKYPS
LRKLTTKLLPR---------
--------------------
--------------------
-------------------Q
WIYALMDFFETPYGLVILVD
-RHGKYMKSFHDPHGTVISA
VSQATDN-GTHLFLGTFKPK
HLAYLKL-----
>TS_TRISPI_Contig1883.FG.2_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------ITYGNLS-
---------LGE-LWIPCAA
VRDSTAFLGPIYDLIGKYPS
LRKLTTKLLPR---------
--------------------
--------------------
-------------------Q
WIYALMDFFETPYGLVILVD
-RHGKYMKSFHDPHGTVISA
VSQATDN-GTHLFLGTFKPK
HLAYLKL-----
>T12G3.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
----------------MKKS
DGSVR---------------
---------RRRGEDDDGGR
VVPLPEKKHKKVP-------
----KSQKPGLILRILGSTP
VKIVLGLLGSLIIAGLLTNR
IINAPIKAVEFDLGDKIPLE
GVLAVNKRLTDAELLLVDQV
YGPESLVLD-----------
-----EKNSKLYAGFKTGII
AEIDMK----EGREKIVHAV
QLAQGNHDCDGSYKKMNLCG
RPLGLRLSDVGE--LVIADA
YLGLFAINWQ--EEKVVKIL
GAGELPANNENAAPIKYLND
LDILPDGR------VIFTES
STKFDDRDFILDLFEHRPNG
RLLIYDPRK---KDLRVLKD
GLYFPNGVQLSIEKGMGKNA
PWRVLYSEMGLARVMQIWVP
RDHYSTAPVKTSPLIENLPG
YPDNIRLTKSGH-LLIPIAS
HRSE------EDRFLEQNPS
VREFITKILSP---------
--------------------
--------------------
-------------------Q
ALGYVANYVADVEGLVIKVN
TETGQIIESYHDQTGRVEAV
SIAIDDG-KGRMLLGSDVNY
YIARAKL-----
>14938.m00333_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-------------------M
VRRRINRRNKRQLYGVLGED
SSLSAIIYLPKTKKLRQFPT
SLSRSVRVVSTNKKITGKKK
KWVAIIKNYFKRLPKPPELT
GTLRPNQELTHAEILLPNRI
NGPESIAIH-----------
-----EKSKTIYVGLKTGLI
AGIEIDRFKKVKLVKSIKLF
KRPEYNRLCDGSYHSVLECG
RPLGMRFNRKNPDLLLIADA
YYGIFEANV---QNETVRQI
LKPGTKIAHSLSWPVVHFND
FDISQDGH-----HIVFTEP
SHRFADRDCFYAMVEHRSDG
RLLHYNMHTG---VLRVLID
DLYYPNGVEFDKTGKC----
---VFFSEMGNLRILKYCFN
YKSG-----KYMIVANNLPG
YPDNIRTANNGM-LWVPLGQ
VRLEDD------SWITERPF
LRDIIAMVVKT---------
--------------------
--------------------
-------------------Q
TFMTILDYFLPKYGLLLLIN
PANGTIMRSFHDPTGSTINS
ISQAIELNDGTILLGGDSNT
FLARFKPSTIL-
>Smp_161220_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MIELKKLVFRSII
VICIGYILHCLLNTST----
-----NSSYIYHVKPSIELN
DQLIINKKYGNLEKIDLINY
NGPESLIY------------
------HNGSLYTTVIQGKI
LRIND------SGIYIHATL
GSLN--------CIGVHECG
RPLGLKLFNNSEN-FLVTDA
YLGVLSVSVK---DGSVKKL
FPLDENFKVT------FFDD
SVILPNGS------LIITEA
STKNTLQHLWTTILEGLPSG
RLTMVDTRTG---QYSHIMD
GLRFPNGIELCNDGKS----
---ILVVETMKLRVLRIPLD
G-------GEVTVFSDGLPG
YPDNIKASPRGG-YWVPVSN
LRDEPLSVL-LLNHLPAYPR
IRQLASS-------------
--------------------
--------------------
------------------II
SMLPFKPTPKGKSSMLIRLD
-ENGQIIEIWKDLQN-ELPN
ACEVLEH-DDILYTGSFYLP
YIGRLKRLSN--
>Sjc_0203510_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MCILMTALIKLILASIP
LIFIGFIIQWYMNTST----
------DLGAYQVTPSVELD
NRLIANKNYGKLQKFDLANY
SGPESFVY------------
------HGGSLYTSVIQGEI
LRITD------SGIYTHAKL
GLR--------NCVGFHECG
RPLGLKLFNNSE-YILVTDA
YLGVYSASVE---DGSVKKL
FPMDARFSVT------FFDD
AVILPNGS------LIITEA
STKYFLEQLWSALLEGAPSG
RLTMVDTKTG---EYSHILG
DLRFPNGIVLHNDGKS----
---ILFVETMKLRVLRLSLD
S-------GKVTVFADGLPG
FPDNIKSSPRGG-YWVPLSN
LRDEPLSAF-LLKYLPSFPR
IRQLISG-------------
--------------------
--------------------
------------------FI
SIFPFKITPNGKSSMLIRLD
-ENGKIIEILNDFQN-ELPN
ACEVLEH-DNTLYIGSYYLS
YFGKLERLSN--
