>TS_TRISPI_Contig2.b.FG.143_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
---MVMLSEP----------
--------------------
--------------------
--------------------
--------------------
----------IRCYCTDG-I
G---CYNETCWTKPGAQCFH
AIKEAFNEEIKSME-----T
LHLYG----------CLPPE
EGGSHLQYDYCNL-NITPT-
------YLFPVNETID----
DENYLTSSLTFLLCIITIIL
LLSSFLAFAVVTWLRRRPK-
--------------------
-------LFLWSNQKIFGAN
KDEDYQFIE---ENSTLTDL
IEQ--SSGSGSGVPLLVQRT
IARQLQMLKSVGKGRYGEVW
KAKWRGE-TVAVKIFYTCEE
ASWFRETEIYQTVMLRHENI
LGFIAADIKGT-GSWTQLLL
ITDYHELGSLHDFLKS-KYL
DRELLARLAYTIASGLAHLH
TEILGTK--GKPAIAHRDIK
SKNILVKPGGVCAIADFGLS
--------------------
--------------------
-SYKQADMYSFGLVLWEMGN
KFAG----------------
--------------------
--------------------
-------------------E
PYKVPYEDLVPSDPSFDEMR
RIVCLDQIRPPITANWTYDD
V--LCALGRLTVECW-----
--------------HPQPTV
RLSAL---------------
--------------------
--------------------
-------------RVKKTMS
KVLEEICRARSKEN------
IMPSV---------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>TS_TRISPI_Contig4.b.EN.1258_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------MT
SIYLIYCSSDPLID-----N
EVLEIR--------------
---SILDELDLTTFDFAST-
--------------------
-GSGSGKKANLLLLLLLLLL
LLLLLLLLIIIF--------
--------------------
--------------------
--------------------
----------EGLPLLVQIT
IARQIQLQHVIGCGRFGEVW
LGNWKGE-NVAVKIFSTVDE
KSWFREVEIYQTTMLRHENL
LGFIAADNKDA-GLMTQLWL
VTEYQPRGSLYDVLTK-ETL
DMQAMFKMGRTIANGLAFLH
SEVGGTH--YKPAIAHRDLK
SKNILVRSNGTCCIADLGLA
VRYFSTCGTIDMPDNT--KA
GTRRYLAPEVLDGTMNFNHF
DSYRRADMYSLGLVLWELCR
RTLINGSC------------
--------------------
--------------------
-------------------D
KYELPYYDCVSMDPTVDEMR
ECVVVAGRRPQTSDNWATHP
T--MSVMMRMMRECW-----
--------------TANAAA
RLTAL---------------
--------------------
--------------------
-------------RVKKSID
ALSAFVAESA----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>14979.m04489_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------MQTLSSFVFFLF
VIVTRAIKDN----------
--------------------
--------------SDPGYV
ILKFMERFQANLKEPINLS-
--------------------
--------EELICNCSYS-G
CGEEITRFLGNNYTG--LCR
STSGICHKRLLPDR-----S
VILSCLSKDASPDLHCRAKQ
PMNDGSIMQCCQNYSFCNG-
--------------------
-ALNLNPVNDYILHRLRKGN
CFIIFTSSDNSIVSSTGE--
--------------------
--------EKLLMNSTDALG
HLSDLLYN------------
LDDSATTGSGSGFPLLAQRT
IARQIELQKEIGQGRFGEVW
LGYWKGD-EVAVKIFSSRDE
RSWNREVEIFQTNLLRHPNL
LRFIASDNKDT-GTSTQLWL
ITEYHEHGSLYDYLSA-NPV
SESVMLQMIRSIAVGLSFLH
NEIP-----GKPAIAHRDLK
SKNILVKSDLTCVIADLGLA
VRYMN--GEINVPDNS--KC
GTVRYLAPEILEDNFSINHF
ETYKTADMYAMGLMIWEIMW
RCGSQEES------------
--------------------
--------------------
-------------------R
SFELPYFDCVGRDPTMEEMK
LCVCIQKRRPTVQEHWIDDK
V--MRGVLQIMQECWT----
---------------ESPVC
RLTAMN--------------
--------------------
--------------------
--------------VRKAVD
RHAASLGWKVRS--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>TS_TRISPI_Contig1.e.EN.1229_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MNTSPKTR-----A
AILSS---------------
--NTTASAKNCGF-HLNSR-
--------------------
-----------WALAVVFSL
CLLYAAMRCRRGRQNGKP--
--------------------
--------VSATNLDDEPRD
PLIAAKDVHGIQQMLHDLDS
GQPATTSGSGSGVPMLVPVT
IARQVTLVKVIGRGRYGEVW
QGLFKGE-NVAVKIFASTDE
QSWLREMEVYKTTMLRHENL
LGFIAADNKDG-GMALQLWL
ITDYHKKGSLFDLLMS-TTL
DLRLMARLARSLANGLAFLH
SEICGTS--DKPAVAHRDLK
TRNVLVRSDNSCVIADLGLA
VRYFAKTQELDIPQNK--KT
GTLRYLAPEVLGDTLNPNHF
DSYRRADIYSLGLILWEICR
--RTGDKP------------
--------------------
--------------------
-------------------D
PCELPYYDQVPADPTLDDML
RCVLLENQRPPLPSRWKDSA
P--LVTMTKLMRECW-----
--------------MPNPSA
RLTAL---------------
--------------------
--------------------
-------------RVRKTID
DLAPLIGDFMAP--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Sjc_0023430_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
------------MECMLLLC
PAANHSDCPPCSPLSEEHQK
NWNKYIDLLLSNWEDKLHLP
TYYRELKTRP----------
--------------------
------------YCCTPGPG
YSCRLNLIHEPLKEPRQFY-
------------------DL
TCAKDDFFTPIKCQQDSD-I
RCCSKKHCNIPSPEELTVLV
KNSPSDLYLVAISL-----L
TILCIILCVISGTFYFLLRR
KSARHEQMIAPHTGSATDRL
WTSDKMDNHYLKRPLQAQDT
VTLNNTYPENAKVLPPDPSA
VSAGIISRGASSLSYFGSSA
--------------------
-LGANPGNINSCSNSPTGAI
TITNSGSNSAIPTTSTIPAD
LLDHTCSGSGSGKPLLVQRT
VARQVQLEERIGEGRYGVVW
RGVWQGD-LVAAKIFSSRDE
RSWFRETDIYQTVMLRHANI
LGFIAADNKDT-GLSTQLWL
ITDYHPLGSLYEFLQQ-HCL
LPFALVRAVASITNGLAHLH
MEITGTQ--GKPAIAHRDLK
SRNILVKMDGECCIGDLGFA
LKLDSSMNSALEVNSNSDRV
GTKRYMAPEVLDNTIRLTSP
EAFKQADMYSLGLIFWEVTR
RCYVHNLFG-P---------
--------------------
--------------------
-------------------D
EYQLPYQDLVSADPSVEEMK
SIVCEQGLRPGLPAIWSQHE
I--VRALQDIMSECW-----
--------------YASPSA
RLSAM---------------
--------------------
--------------------
-------------RVKKSLA
GVRKQLDNNPVLSGCSHTNY
LPPEATEKLPFGIIRCASVP
RNSNNNII--TNNKQINLLP
TLANTNSVGATTTINITTVD
TGTSNKLLIPGNNNTSSSLI
TSKMHDINDESSRNSHC---
---------DMLYSFNNAKI
SYWSSCEYDKLLLLNAYDNN
NTTTTTTINEQPIPIEFYGI
EPSGL
>Smp_049760_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
------------MECMLLLC
PAANQSDCRPCSPLSKKHQK
NWNRYIDLLLSNWEDKLHLP
TYYRELKAHP----------
--------------------
------------FCCTPGPG
YSCRLNLIHEPRKEPRQFY-
------------------DL
TCAKDDFFTPIKCQQDND-I
RCCSEKHCNVPTSEELMLLV
KDSPSDLYLVAISL-----L
TILCIILFIVSGTLYFLWRR
KSDRQKQISSQNG-ITSDHL
WTSDNIDNKYLKGPLQVPDT
LTVNSTYPENARVFPNDPSA
VSAGITSRGASSLSHFGSSA
--------------------
-LGATPGNINSCSNSPTGAM
TITSSGSNSAMPTTGTIPAD
LMDHTCSGSGSGKPLLVQRT
VARQVQLEERIGEGRYGVVW
RGVWQGD-LVAAKIFSSRDE
RSWFRETDIYQTVMLRHANI
LGFIAADNKDT-GLSTQLWL
ITDYHPLGSLYEFLQQ-HCL
TPFALLRAVASITNGLAHLH
MEITGTQ--GKPAIAHRDLK
SRNILVKMDGECCIGDLGFA
LKLDSSMSSALEVNSNSDRV
GTKRYMAPEVLDNTIRLTSP
EAFKQADMYSLGLVFWEVTR
RCYVRNLFG-P---------
--------------------
--------------------
-------------------D
EYQLPYQDLVSADPSVEEMK
SIVCEQGLRPGLPAIWSKHE
I--IRALQDIMSECW-----
--------------YASPSA
RLSAM---------------
--------------------
--------------------
-------------RVKKSLA
GVRKQLDTNPALSDLSHTNY
LPPEATDKLPFGIIRCPSVP
RNTMNNNTNTINNKQINLLP
NLTSTSSIGAATTPGNKSLI
SGNHINTTYNDTNNPLLTTT
ITITPTTILNSNNIHHRNCQ
CNDDNNMLYSSLLYKNGNNP
SYWSNCEYDKLLLFNTHNNN
DDNNTTNHHHPNEESNNNSN
SKHL-
>F29C4.1a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--MRIRHVVFCLLALVYGAE
TSDDDLDERTNIFIRDKLIP
ALKLAEVTKVN---------
--------------------
------------------FT
RLHLCHCSREVGCNARTTG-
--------------------
---------WVPGIEFLN-E
TDRSFYENTCYTDGSCYQSA
RPSPEISHFGCMDE-----K
SVTDETEFHDTAAKVCTNNT
KDPHATVWICCDKGNFCAN-
------ETIIHLAPGPQQSS
TWLILTILALLTFIVLLGIA
IFLTRKSWEAKFDWYIRFKP
KPGDPLRETENNVPMVTMGD
GAGSSVPEVAPIEQQGSTMS
TSAGNSFPPGIMPNNMKDML
DVLEETSGSGMGPTTLHKLT
IGGQIRLTGRVGSGRFGNVS
RGDYRGE-AVAVKVFNALDE
PAFHKETEIFETRMLRHPNV
LRYIGSDRVDT-GFVTELWL
VTEYHPSGSLHDFLLE-NTV
NIETYYNLMRSTASGLAFLH
NQIGGSKESNKPAMAHRDIK
SKNIMVKNDLTCAIGDLGLS
LSKPEDAASDIIANEN-YKC
GTVRYLAPEILNSTMQFTVF
ESYQCADVYSFSLVMWETLC
RCEDGDVLPRE---------
--------------------
--------------------
-------------------A
ATVIPYIEWTDRDPQDAQMF
DVVCTRRLRPTENPLWKDHP
E--MKHIMEIIKTCWN----
---------------GNPSA
RFTSYICRKRMDERQQ----
--------------------
--------------------
------------LLLDKKAK
AVAQTAGVTVQDRKILGPQK
PKDESPANGAPRIVQKEIDR
EDEQENWRETAKTPNGHISS
NDDSSRPLLG----------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>13257.m00083_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
----------MKSVKLWTFG
VIEMLTAVLLFGFFHLSANG
NLQEYGRKQDHDSAERYDAD
GDLSVPVDAQG---------
--------------------
-------------RPHQFNS
SRIESEADRKRKNAPARYED
--------------------
--------ERSFCYCNYAPE
FCGGFTNFTCIKHLEASCFH
FTEEIYDKTLKQIETMHLFG
CAPLTRGSGGSYFTCKAHLV
AHARPKSIACCQEGNYCNR-
--------NLSVPAYVNVSP
EGVIVDHYVSCVTVTIILYA
VLFSLFVGIALLLFWRWD--
--------------------
-------------IIAEKLK
PSLQKSTLQTIDTGEIEKAP
MLYDISSGSGSGFASLNQRT
VAQDLEFLSVVGKGRYGEVK
KARYRGDRIVAVKTFYTTEE
DSWKNEKEIYQTQMLNHENI
LQFVAADIGSE-DSITRMLL
ITDFHAYGSLFEYLQRGETL
SVSEALHLAYSAVCGLEHLH
SALHGTGTPQKPAIAHRDVK
SKNIIVKRPYVCCIADFGLA
LTEDMVKTRMDINIQV----
GTKRYMAPEVLDKSLNVKNF
HHFKMADIYSFALVIWEILR
RIQEDNCLSRASESDSGIGS
SGSGSGTAK-----------
-LMPGFIANPDIFTYVTNVS
SSVVVDHQSISDNSMSLKAR
PPMQPFDGMVDPDPSFEQMR
RLVCFEGKRPLLEDAWMRDP
C--LKEICELIEECWS----
---------------ASIDC
RHTALRVKR-----------
--------------------
--------------------
-------------KIKDTVL
KHNGLGGAQTSGSSKQDCSA
KALSV---------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>C32D5.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
---MNITFIFILIFGFFNTQ
KCSKDYDHFDDEDLALSIPK
NAIGVPKEFR----------
--------------------
--------------------
--QQVLKEMKLRNRPND---
--------------------
---------ILKNRCYCNYD
QSICGNNMTCVKQDGAACYH
AVEEVYNKAEKRMETLHKWG
CATLERGSGASHLTCNSWRA
AHHSPKSIGCCYEGNYCNKN
------LIPPAYVHHHKEKA
LQEKTDNPEDYDSPLENMTR
GGKMFIMVFATVMSVFAVIG
--------------------
-------CIYLCITRAEEKS
KARARAKTVSLKTESTYMES
KSMLEDSGSGSGQAALIQRT
VRQDLTIIKTIGQGRYGEVR
KALYRGS-YVAVKTFYTTDE
DSWKNERDVYQTNMINHENI
LQFVAADIWSEEDSMTKMLL
ITDYHELGSLSDYLCREETL
TTDEALRLIHSCICGIEHLH
AAVHGTGSFRKPEIAHRDIK
SKNIIVKRPNVCCIADLGLA
LRYQNDKILPEKFNVQ---V
GTKRYMAPELISNKLNPKDF
SQFKMADIYSMALVMWEVAI
RVEVNTCEEVLTVDETSPDH
SASSGIG-------------
-----------ESVSSSGNI
SRMHLQKTNVEGHSTSLKAK
QHVPPFDGIVHNDPNFDEMN
DVICVRRIRPPPDLAWKNVP
A--LNELSKLMEDSW-----
--------------HSIPHF
RHSAL---------------
--------------------
--------------------
-------------KLKKEMA
ELIKNPDRQNQSQRKVEFQQ
QDSGLVESATNQS-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Mh10g200708_Contig523_4450..7441_M_hapla.pep_
--------------------
--------------------
--------------------
----------------MIDG
LELVVNEWLEIKWIIFSLKI
MNKNISLDIR----------
--------------------
--------------------
--------------------
--------------------
----------KYCFCNYD--
-----EPQKCDYER--TCIK
EFNEQTRTFELKHLFG----
CAPLEKGSNGSHLTCNAWRF
THSSPKSISCCYEGDYCNKH
LS----IPSFPLLERPTKQI
ESFSSFYSLEFFIFAFFGFL
IGLFLIIIVTLPLHKYIRK-
--------------------
-------KGKLIRRQLNSKI
NKKLKDEEEIINLSKNKENS
QSFFEDSGSGAGRIILNKRR
IALDLQMQEIFSKGRYGELC
KAIYRGS-FVAVKIFNSTEE
ESWRNERDIYLSQMLNHENI
LQYIAADILSNVDSLTQMLL
ITDFHPLGSLYDYLCSKYSL
NLEEALNLSLSAITGLEHLH
NPVRGTGERQKPEIAHRDIK
SKNILVKRPGVCCIADFGLA
IAKNENLIKNNFLNIQ---V
GTKRYMAPEILNKTLNPNNF
EEFKCADIYSFSLVLWEIIN
CIELKTNNLKQNNYLNNCQS
TNSSGVVSGGTTSFVNNTSQ
SFEIKTNSFQNNTSTTTSLI
SENEINNLNIFNNNLKERKG
QHKLPFELIVETDPSFDQMR
EIVCEKKIRPPILNEWIDKK
EENLIIICNLMVECWS----
---------------NWPRS
RHKAL---------------
--------------------
--------------------
-------------KIKKEIA
KIIKNFDD------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Minc12540_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--MNISVRKY----------
--------------------
--------------------
--------------------
--------------------
----------CFCNYNDDES
QKCNYDEKTCIKDEFAACFR
AVRQEFNEETKTFELIHLFG
CAPLEKGSNGSHLTCNAWRF
AHSSPKSIFCCYEGNYCNK-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------HLTIPS
FPLIEHSGSGAGRIILNKRR
IALDLQMKEIFSKGRYGEIC
KAIYRGS-YVAVKIFNTTEE
ESWRNERDIYLSQMFNHENI
LQYIAADILSNVDSLTQMLL
ITDFHPLGSLYDYLRSNYSL
NFEEALNLVLSIINGLEHLH
NPVRGTGECQKLEIAHRDIK
SKNILVKRPGVCCIADFGLA
IVKKEENNFLKNNLVN-IQV
GTKRYMAPEILNKTLNPNNF
EEFKCADIYSFSLVLWEIIN
CIQLPTTNN-----------
--------------------
--------------------
-----------YSKQIIKQQ
NNYLNCQSMSNYSSGIASGG
GTTTTTITTLPFINTNNLIP
STNSIEIIKTSNSFS-----
--------------NNNIST
ISTSLNEIN-----------
--------------------
--------------------
-------------NLKEHQH
KLPFELIVETENSSTNFE--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
