>B0303.7a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
VRLPPPTPPR----------
---KPNICGTSGNS------
----------NGINENIDTS
TFSVSAAKALFESAKRPEVR
NAAIAAAKNPFVRQTAKN--
--------------------
VAQDEKARGAVLNAVK----
--------------------
--------------------
--------------------
--------------------
-------DPSGGNKIS----
----------------AAFA
VADANRKSDSVPP-------
--------------------
-PPPHRGGTSPGKLSGSHSA
IRSQLENMHIGGSVMSS---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------NSSTATPSYQS--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------NS
TSSYSSSAPVAPP-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------PVPRHTQSIP
SYSAPAISTPYG--------
-IAKFDYAP-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------TQSDEMGLRI
GDTVLISKKVDAEWFYGENQ
NQRTFG--------------
--------------------
--------------------
---------IVPSSYLDIKI
PLKEAFTALPPRPAAPSGSS
--------------------
--------------------
-----------SGTYATAIY
----DYNSNEAGDLNFAVGS
QIMVTARVN----EEWLEGE
CFGRSGIFPSQFVDCPNLYQ
VPMKQSAPSSAPSYSHPITN
N--------SGPKQTVTVSY
DYDSGVASDLRLFEGDVITA
LEDIDAQWLLAECR------
GQQGMVPKTFLGPPYGSPKK
APSKGIAE------------
---------IACAFSPKK--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------AVAT
GDYHSED-PKHLYVTRGDHL
LIVE----DVDDYYYKGKLE
AFKTLPAGILPKNIVKLEN-
----------
>13801.m00225_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MAEGTFGTGKF
STAFSTAKAVFDVVKKPEVQ
QRLIAASKNETVRSAISS--
--------------------
-LAKNEAVGILLDKISIL--
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------VRK
VTLNALQDEKTLK-------
--------------------
TAYDIAQACDKQQQQKRLVK
KHSIPADKFVNHAGTSN---
SIVNKAP-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---TSIYPSLPPSQDYASDI
NX------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------KT
VDKFAVMPSQSIS-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------YDIFQSNF
ASEANAFMTTNQ--------
EQQPYGYAK-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----FQFLASHFDELSAEP
SDMIILEKRVDDQWVYALNK
RTGQKG--------------
--------------------
--------------------
---------IMPLLYIDVKI
PLPTSLTSSTSQIPYR----
--------------------
--------------------
---------------VVALY
----DFDSSVSGDLTFRAND
EIYVVEKIN----DDWLCGK
IGVHQGIFPANYVREITVPL
TAPSEPISCYTSAEY-----
---------------ISALY
DYNSDVEGDLIFKAGDQIEV
LEWVNEDWLRGKLN------
GKIGLVPRTYIENCSSKIDA
GKHLNITN------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------TIVTAT
NDYYNNA-KDHLCFSKGDQI
EVIE----EIDGNWLKGKLL
LNMSN-TKSFPVGLFPKSAI
L---------
>TS_TRISPI_Contig1506.FG.1_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MNSKIKIMRALH
NFQTNIPGDLNFRAGEIIIL
LKTIDANWYSIILLIKCYG-
--------------------
-----ESAEGYQGIFPSS--
--------------------
--------------------
--------------------
--------------------
--------------------
----------------YVFE
ENLPQVQPGQKLL-------
--------------------
IALQTFHAQAAGDLSVNAGD
IILGIEKVDENWWQGVS---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------REKCGLLPANFVR
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------ELDMHLDNS
QFRENDN-----------VP
TKRAVVLKS-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MKAALPEEIDLNE
GEQVVIEEFLDKYWCRGTCQ
NRR-----------------
--------------------
--------------------
--------GIFPRSFVKIVE
EEEEQSRTSLNEYKFAISDS
--------------------
------KKDLPSKPT-----
------------MPYAIVKY
----KFVPQYEGEMAVEAGE
LLSLIGHVD----NEWTLVS
AEGRAGIVPTSYLNIIIDCP
TVSGTELQSAIAEANAN---
---------RPAVTGANSHA
HWASSSGGLADFNKSTYYKV
LFDYNAATVNHLMVK-AGDL
IT--VLKTVGTEWVEAVNQR
TLSRGLLP------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------RSYLTAI
NDFQIQNKQDHMKMSQKRQL
DIELEKCIARNLLSLDFDCK
NRKISDCNVDPPPYARR---
----------
>TS_TRISPI_Contig1.a.FG.150_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MICIGKFIRSPTFNVPLTY
CITESKSGDLNFRAGEIIIL
LKTIDANWYSIILLIKCYG-
--------------------
-----ESAEGYQGIFPSS--
--------------------
--------------------
--------------------
--------------------
--------------------
----------------YVFE
ENLPQVQPGQKLL-------
--------------------
IALQTFHAQAAGDLSVNAGD
IILGIEKVDENWWRGVSREK
CGLLPAN-------------
--------------------
--------------------
--------------------
--------------------
-----FVRELDMHLDNSQFR
ENDNVPTKRAVVLKSMKAAL
PEEIDLNEGEQVVIEEFLDK
YWCRGTCQNRRGIFPRSFVK
IVE-----------------
EEEEQSRTSLNEYKFAISDS
KKDLPAKPTMPYAIVKYQFV
PQYEGEMAVEAGELLSLIGH
VDNEWTLVSAEGRAGIVPTS
YLNIIIDCPTVSGTELQSAI
AEAN---------ANRPAVT
GANSHAHWASSSGGLADFNK
STYYKVLFDYNAATVNHLMV
KAGDLITVLKTVG-------
--------------TEWVEA
VNQRTLSRGLLPRSYLTAIN
DFQIQ------------NKQ
DHMKMSQKRQLDIELEKCIA
RNLLSLDFDCKNRKISDCN-
----------------VDSK
LISPSSSICSTSPSPSTSKC
ATALPSSLVMSSYMKCDDSF
LSPSTKKIPPPRPKTLPVVH
QESPHSGEWNGRLANIFNEI
LSSEKDYCNELMIIEKAFEK
HQTELHMDDFMEKMNMLINL
SKSLIGKLENLSTKPTVLGI
SG----------IFIDISRS
LESAYTSYFETQTTVVSKIN
EKVVLEKVMVDIRKSALCCF
DVFSAILCPIHRVMKYPRYL
TEMLKIKDEEYDRLEKQFFF
QVKKIRDFMQNLQDVCDRTL
STFNIYQSMAQSFLPNSSDS
NNSPSQQFALKYLNTFNQVD
PRSAAQKHINALQTDVIAPM
AKLLIEAKGLEKLVEKRRDK
LLDYEMADSKLQKSYTKATE
HVKMHTNMQRMKKCQSEYEA
LN---RQLLVDLPKFIEKCL
QTFNVTFNLFIKHQS-----
--------------TFACQF
GQQLQQMNSESSQPSTDTHH
KPISMGNIN----VPLVETE
GNCQQPIATPNLLLDKPYYK
QQQQQQSQNLQNSVN-----
----------SIYTELQAIF
TDTSKRNEWVQFSDNNNDKS
IFAENRESVDELSANKPSGA
EKSGSTTTDWREDEQIRTTM
LLPSRFAPPPP---------
-----ASPPHPEGYSKHRLN
STASSNIEN-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------EEEDTVDFCIAL
FDFSASG-PDELSVAQDDLL
AVHQRKDLQDNEEWWLVENE
FGNVG---YVPANYLKLYAA
L---------
>Minc18919_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MNKDRPYCKALYDFR--
--------------------
--------------------
--------------------
--------------------
--------------------
----------------SEYP
GELNFTANELIYID------
--------------------
KKINEEWLIGELQKSGQKGI
FPISFVEIIHNEQELSK---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------FSQSQPDP
ILSPEGFSNSIG-------V
ATVLYDFEG-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------RFEDELSVKA
GDSIQVSSIIDNEWAKCRDP
TTGQSG--------------
--------------------
--------------------
---------IVPQSFLHIFL
DGLESPKEISQISSKNGENS
--------------------
--------------------
--------------------
---FTSIASSYDQPPSNSSA
SISSMSNFASSNVCDWPNPW
ESSNVSINNSNVFNNVFSLP
PPRPPPPNPILRQT------
-------------SFTESTA
ELSSRNSQYIQNDRRKSLNS
IKEDEQQYQSLINP--ANNT
FTNPLIPQLETINGSDTKSK
VLLDFLN-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------TEQI
YLFDLQTWQNCVNESGNLTK
SEKE----ALTKEYPALEKL
CQSIISALTSQKGYYC----
----------
>Y37A1B.17a_wormpep204.longest_isoform.pep_
--------MAHLSWVRISNA
TQDPETRCSVAQDQIVKVVR
EEGDWCHIQTIEGVSGRVPR
VLTLPIVDPKRQPDEQVYCS
IEAYTSIRSDDLSFAEFSIF
VAKPSRSNPGYLDGFLVNDN
AVQIGRRGLLPEAHLVNLHV
SAESPMKPSFTTDFSEADVR
FRTPATAPKAATSN------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------Y
AVSPYARAVYDFQGEFENEL
SFSADEIISLRRRIDAEWLE
GSIGSARVGIFPTSFVQIIV
DLPDDDTTSLQNNRRSTTTE
NDGIGFANVRHAFSGRQGDE
LTVNAGDTVRVLRMVNDEWV
MCKDPDTEKTGIVPVGFLEV
YLDEEDDDNQSSNAMRRG--
--------------------
--------------TGGTSD
FTFGSSNNRSSFISNAESSS
DWRPPAG-------------
---RTNTDWATFEAVPPAAP
ASKPAQNWATFGEEWIAPVQ
LAKTSAPARPPPPKQSSIQS
PINDIGN---------VADM
FGMTDTPKPSNPAIQSAGSD
FEIGLISATEGASNDEDKRC
RIIEELIS------------
--------------------
--------------------
--------------------
--------------------
-------SELQFISDINSYT
EAVDGTP---------LLNQ
KQKVILKNGCAQIVQLSANL
VQLLTNEQIKPQDAQLIGAC
FLQLRKPFAQTYGFYFRNIE
HINALTNSAKHEKTMESALQ
DIVKRMRESGSVVIDGPTAV
SRPIQRATKYPLFLNEIVKL
TPLVHTDHPKLTEAIKQMSN
LGQKMNESKRRKELTQKYMS
DDKQTFGEMLSKMTFHSLKK
KSNRFTYRMGSSLGVVKLLR
DTDFDRLVCELDSAERRLVR
FNYMMVIYRKKMFHETRVLM
HKKVVEPRKKHLSSSEIDLQ
LQPFNHAIKTWASEANVRIR
DEIVKALR--------SIPK
RLIKKRNDKLMDYEASRTKE
KGLGKRDFAEIQKDYEALN-
--------TQVKQQLPKVTE
YLTTVLATSMRTVSEQDKAL
METLRKLFNDAKSKAAEDQS
KAARSLIIPTTICFVDYYDQ
DRMKPLQKIANKAIQNMKQR
ARSVSPKGSKPGTSSSSTTV
TESPWATAPTFIPPAATEIL
PTITEGSTSTHKFRNQNATE
RN------------------
-TILEKATAKGRLGDIFVAT
SHYPQDSGMLKIALAEGKLL
IVKQNDLVLAVNREVPSMWL
CYNGYYNAMLPSSILKPYTS
IEKGVDVAKSAQFTGQTAQV
VAPQAPVQNQNAPKSQNLID
LEDLFGGPPQPAAAAHPTSL
AFAPAQQQ-----QNFATFD
FTSSPLQPTSLVPQAPAQNA
QFDWNMAAKTLPLAPAPPMQ
VSQQAPQQQQQVQEGAGGAN
YNLDLDNLFSGLSTIDWGAK
TSTAPPPLYSNTPLDT----
-----------ATSPPVSAF
RG-VDFQTGVFNPNSLPDEA
PPPLPVIVNPTRDDPFSTNF
VPNFAAAAPATSPFGTASNS
SVQFPVSFDEAPSSMGSLGL
PTG----SMNQKRSASAAAQ
PTNVWPTTSMMSRSDSPQPL
IPSRPEPAVKNVYPSLNDGS
ARAPTFATTFPSQANQSLPM
YSAVPNDTMSMN--------
-------YAMPPMYDTTPQS
PRVQLQQQHQP---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----AAYDTPPTIAPIYDQL
PNESPASTAIRPVLCQVKVD
YDFLPQG-SNQVEVKEGEVI
GVLQRTDDDGNPEWLLIKRD
SGKVG---YVPAAYCRPV--
----------
>Sjc_0024610_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-MVGERSTSEQRGPSVLAKP
IRPSPFSGSYRAASAEDKHV
HSPWIFNNSPKVLNNLSKNH
RNIQGSNNTSLSS-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--SALSIDEQFSGG------
----LNMKSFEKFAHMGQPH
VIALYNFETGVDGDLEFEVG
DIIMLEDIVDESWYKGRS--
--------------------
-IRTGAVGIFPMNHVEVR--
--------------------
--------------------
--------------------
--------------------
--------------------
----------------IPLT
SGLFTDTQPKMAVG------
--------------------
-YSNRSKNITSTTRTYSHPS
FKKKPVPLPKVINQSAPVGD
IIMLEDIVD-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---ESWYKGRSIRTGAVG--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------IFP
MNHVEVRIPLTSG-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------LFTDTQPKM
AVGYSNRSKNIT-------S
TTRTYSHPS-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----FKKKPVPLPKVINQSA
PHYINHDCTLCRQSFPCCNL
PKRPSRIRVASLKAKHELCS
--------------------
--------------------
-----------PNSTESLDS
QTINSSTNLKRVHSNYTNME
S-------------------
--------------------
-------------KVSSDFY
P--LGLLSSITKQIDINENH
SKNGSLCRKACHKDPSSYLY
LEELADIFPKAKFIHMIRDG
RAAIASTISRGIHP------
----------LYVPENVHTA
IAIWERTTSQMLSDCENIGS
VRCLTVRYECLILNP-----
RKEVKKVLDFLELPWDDKLL
EHEKFVQN------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------TSML
NKYEASS-PQIVKSIYKKSL
NAWSNDESHFPMDFILFMNE
NSTLLKTLGYATDEIPPNX-
----------
