>13698.m00031_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------LT--EIVFAEMR
NFCCELRT---VNLLGCFIT
DDTVA---------------
--------------------
---DIASSCSQLEYLCLSSC
TQVTDRALISLANGCHRLKD
LELSGCSLLTD-HGFGILAK
N-------CHELERMDLEDC
SL-LTDITLDNFSKGCPCLL
NLSLSHCELITD--------
--------------------
--------------------
--------------------
--------AGLRQLCLNYHL
K-------------------
------DRIQVLELDNCPQI
TDISLDYMKQ-VRTLQRVD-
----------LYDCQNITKD
AIKRFKNLKPDVEVHAYFAP
ATPPTSTQPTRRAI------
--------------------
--------------------
---------CRCCTIL----
----
>Mh10g200708_Contig1479_33040..35857_M_hapla.pep_
----------MLALFKNKIF
VDCPSTFINN----------
--------------------
--------------------
--------------------
--------------------
--------------------
----------SINSEEYSNK
KSKAIVLCALYRMDPLIHFD
CSVRHDGILWDWRLENSEIT
TKQSTIIWPKKAIYKIRRIM
NKNRKGS----------AQI
SNKGRKRAMYLITTMLPGTS
SQQQQNGHTLNSQQQKHNHQ
NVPPALINR-------MLPT
ELIL---RVFSYLDITSLCR
CAQVCRSWNKLSMDGSNWMD
VDLFLFQR-----EVKTSVV
ESLAKR-------CANFLKV
LSLKGCENVQ--DNAMRSFA
TKCPNIER---LTLTKCKLI
TDGEG---------------
--------------------
--------CKRLEELNISWC
EQITDLGLFYIAKNCINLKT
LFCKGLDNITS-NCFANLEM
A---------ELKRLSLHSC
PN-VLDETVNDIARHCPRLE
FLSLSNCKEITD--------
--------------------
--------------------
--------------------
--------NSLVAISLGCPR
LKDIELAGC--INLTDAGFI
QLSKNCHELERMDLEECLLI
TDITLSNLNNGCPNLLSLS-
----------LSHCENLTDI
GLAELCASHKDR--LQVLEL
DNCPNITDNTLESM-KMLQV
LERIDLYDCQMITKDAIKKF
KQSRPGVEVHAYFAPATPPP
QAPPARRGICRCCAIL----
----
>C02F5.7b_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----METAERISAAASAAS
SRRAKRLAQQAHKTHPVIQA
KQNQMYLIT-----------
--------------------
---------------TLSPA
QVDNSLINR-------VLPK
EVLL---KVFSFLDTKALCR
SAQVCRSWSILALDGSNWQR
VDLFTFQR-----DVKTAVV
ENLARR-------CGGFLKE
LSLKGCENVH--DSALRTFT
SRCPNLEH---LSLYRCKRV
TDASC-ENLGR--YCHKLNY
LNLENCSSITDRAMKY----
----IGDGCPNLSYLNISWC
DAIQDRGVQIILSNCKSLDT
LILRGCEGLTE-NVFGSVEA
H-------MGAIKKLNLLQC
FQ-LTDITVQNIANGATALE
YLCMSNCNQISD--------
--------------------
--------------------
--------------------
--------RSLVSLGQHSHN
LKVLELSGC--TLLGDNGFI
PLARGCRQLERLDMEDCSLI
SDHTINSLANNCTALRELS-
----------LSHCELITDE
SIQNLASKHRET--LNVLEL
DNCPQLTDSTLSHL-RHCKA
LKRIDLYDCQNVSKEAIVRF
QHHRPNIEIHAYFAPVTPPT
DQVVNRGGICRCCVIL----
----
>TS_TRISPI_Contig6.a.SNAP.105_T_spiralis.071204.pep_
------MFVSILFCMGNFEI
VTFEHRACAG----------
--------------------
--------------------
--------------------
NCLQQLWLKN----------
--------------------
----------FETINLHSSA
PLNEEGLMNRKLPEELILRI
FSYLDIVSLCRCAQVCRTWN
ILALDGSNWQNVDLFQFQKD
IKTGSKK--------TLSQT
KNSSKVVNFNFVTVKQIVVS
ANCTLG---------RDMVE
NEVRRLIVN-------CQLP
IKRR---QLISEQPIRKIRS
NFIAGEKYESSLSSSSGWEK
LNLLDIYKSEIENRCAASVV
ENLAKR-------CGGFLKK
LSLRGCESVQ--DGALDTFA
RKCNFIEE---LNLEKCKRL
SDSTCESLGLH---CKRLRV
LNLDCISGITERGLKF----
----ISDGCPNLEWLNISWC
NHISDEGLEAVAKGSKRMKA
LICKGCTGLTD-EGLRHVGE
H-------CHDLRVLNLQSC
SH-ITDQGISYIANGCHRLD
YLCLSMCSRITD--------
--------------------
--------------------
--------------------
--------RALQSLSLGCQL
LKDLEVSGC--SLLTDSGFH
ALAKNCHDLERMDLEDCSLI
TDQTASHLATGCRNLIELVR
KESGRQSKMSLSHCELITDE
GIRSLAQGLSAQEKLNVLEL
DNCPLITDQALESL-QECRT
LKRIELYDCQQVTRSGIRRF
KQNLPTVMVHAYFAPATPPV
HQRRNQHRYCRCCKSIRVEL
QPSH
>TS_TRISPI_Contig6.a.SNAP.121_T_spiralis.071204.pep_
MLVDFIPCLMAQISEENPIK
MDCLYNRLICVAP-------
--------------------
--------------------
----VIGTAALVNADPLTVP
LPFHCLPSRK----------
--------------------
---------TRLSSYIASPL
SGCSKQYFGRRKLWLKNFKT
INLHSSAPLNEEGLMNRKLP
EELILRIFSYLDIVSLCRCA
QVCRTWN---------ILAL
DGSNWQNVDLFQFQKDIKTG
SKKTLSQTKNSSKVVNFNFV
TVKQIVVSAN-----CTLGR
DLPIKRRQLISEEPIRKIRS
NFIAGEKYESSLSSSSGWEK
LNLLDIYKSEIENRCAASVV
ENLAKR-------CGGFLKK
LSLRGCESVQ--DGALDTFA
RKCNFIEE---LNLEKCKRL
SDSTCESLGLH---CKRLRV
LNLDCISGITERGLKF----
----ISDGCPNLEWLNISWC
NHISDEGLEAVAKGSKRMKA
LICKGCTGLTD-EGLRHVGE
H-------CHDLRVLNLQSC
SH-ITDQGISYIANGCHRLD
YLCLSMCSRITD--------
--------------------
--------------------
--------------------
--------RALQSLSLGCQL
LKDLEVSGC--SLLTDSGFH
ALAKNCHDLERMDLEDCSLI
TDQTASHLATGCRNLIELVR
KESGRQSKMSLSHCELITDE
GIRSLAQGLSAQEKLNVLEL
DNCPLITDQALESL-QECRT
LKRIELYDCQQVTRSGIRRF
KQNLPTVMVHAYFAPATPPV
HQRRNQHRYCRCCKSIRVEL
QPSH
>TS_TRISPI_Contig546.SNAP.1_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--TWSKKTLSQTKNSSKVVN
--------------------
--------------------
--------------------
----------------FNFV
TVKQIVVSAN-----CTLGR
DLPIKRRQLISEEPIRKIRS
NFIAGEKYESSLSSSSGWEK
LNLLDIYKSEIENRCAACVV
ENLAKR-------CGGFLKK
LSLRGCESVQ--DGALDTFA
RKCNFIEE---LNPEKCKRL
SDSTCESLGLH---CKRLRV
LNLDCISGITERGLKF----
----ISDGCPNLEWLNISWC
NHISDEGLEAVAKGSKRMKA
LICKGCTGLTD-EGLRHVGE
H-------CHDLRVLNLQSC
SH-ITDQGISYIANGCHRLD
YLCLSMCSRITD--------
--------------------
--------------------
--------------------
--------RALQSLSLGCQL
LKDLEVSGC--SLLTDSGFH
ALAKNCHDLERMDLEDCSLI
LLELLT--------------
------------QHRIVSHD
APLTLQSDPNECS-FPDLNI
DN------------------
--------------------
--------------------
--------------------
----
>Sjc_0200660_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MENFPNYFH
ANGSVVANGKTN--------
--------------------
--------------------
------------------SH
SKNNICINDS-------LPK
ELIIR---VFSYLDITTLCK
CSQVCKFWYECAFDGSNWKS
INLFDFQR-----YVQPKVV
EKIAQR-------SRGFLRE
LRLKGCRNVT--DEALKCFT
ELCHMIES---LDLSGCQNL
TNGTCDYLGKN---CSLLTT
LSLESCSRVDDTGLEMLS--
-------WCSNLTCLDVSWC
S-VGDRGLTAIAKGCKNLQR
FRAVGCQEITS-RGVEQLAR
H-------CHSLLLLNLNYC
GQGVTDEAMVHLSIGCPDLR
VLAVSHCSITDQGLRAIAGT
LSPGAAAAIVGQATSNSQQN
GIPLILPVVTSNGNA-NHQD
ASSANNTADNNNYGDLSANG
RLQKGSDSNKTLLVPVGCVS
LTTLEVARC--SAITDIGLS
AIARVCNKLEKLDLEDCALV
TDSTLAQLAVHCPRLNTLV-
----------LSHCDQVTDE
GIARLAEGLCGTDQLQTLAM
DNCPLLTDAALEHLGSNCRK
LRQLDLYDCQLITKQGINSL
EVHYPQLQIHAYFAPGTPPA
LTFARRRRYCRCCRII----
----
>Smp_097020.1_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MENFSNYFN
TNGSAVANGKTN--------
--------------------
--------------------
------------------SY
HRSDVCINDS-------LPK
ELIIR---VFSYLDITTLCK
CSQVCKFWYECAFDGSNWKS
INLFDFQR-----YVQPKVV
EKIAQR-------SRGFLRE
LRLKGCRNVT--DEALKCFT
ELCHMIES---LDLSGCQNL
TNGTCSYLGKN---CSLLTT
LSLESCSRIDDAGLEMLS--
-------SCSNLTCLDVSWC
S-VGDRGLTAIARGCKSLQR
FRAIGCQEITS-RGVEQLAR
H-------CHGLLLLNLNYC
GQGVTDEAMVHLSIGCPDLR
VLAISHCPITDQGLRAIAGT
LSPAAAAAIVGQSTSASQQN
GIPLILPVVTSNGSVNHQDA
SSPNNNDNNHGDRNSTVNNN
RRQKTNDSNKTTLNPVGCVS
LTTLEVARC--SAITDIGLS
AIARVCNKLEKLDLEDCALV
TDSTLAQLAVHCPRLNTLV-
----------LSHCDQVTDE
GIARLAEGLCGPDQLQTLAM
DNCPLLTDAALEHLGSNCRK
LRQLDLYDCQLITKQGINSL
EAQGSIRYICAAQISFDLCE
GCDTAQLPKPKQVVLLGGHT
RSL-
>Minc07056_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MVRYMQT
SRRGTKRNSKEAGKAELKRS
RKSKAVTDESNSSSQDWSLN
TSNVHINQLPSHVLGKIFSN
LNTIDHLR------------
IEKICRHWRQIAISYSWDNY
EMISYS----------QVFQ
DCPAAKVTVCMK----VTNR
HIQIIMKRARHHLKVIDLVG
FRLDPKLNYSICSSLKIVPS
VHTLYFDY----MQLTNSSL
SLIGRH--------LPKLKH
LSFRNCFKHTNMEKGLAKLF
SSCQSLES---LNVSENEIL
KGDCFEELPKT------IKK
LNISCCFRLKSAAVNG----
----IQANCTNLETLIMDQV
DTIQTQQMNNIFMALKNLTV
LHFSECYGTEFYEGQPNLTA
LG-----NLTQLREMHVSDN
LL-INNDVLRAIGQGCRSLQ
LINLSMSNRAVT--------
--------------------
--------------------
--------------------
--------DTGLRHLASLSS
LNELRLTGH--RALTDETLI
EIANQ-GKLKILGLGKCINI
SNMSVIMVIRNCKELKTLD-
----------VSYCPNVTQV
IFKELDKQMLIRYGRSNPTT
NSNSDVKKFNLLISRSGAHG
CIPQKYSPWIKIVDHYESDA
SGSGGGPLGIGNLTPGMLVA
RILHLPHALIRELHPV----
----
>14608.m00263_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MRLRSNR
NTEEPYVVSG----------
----------QYLRSSVQPR
RAERKRAKRMAPVNRDEKSA
KRKVRDLSAP---TTSGCSS
TALHHQ-----------QQQ
QSLHPPVNSD---NSAQLVK
RKINKSSR------GKADKI
QEGSVQEDISS-----IPDH
ILISIFTLLPIVDRIR----
----IERVCRRWRHIAKNYS
WTMTTEFSYSSLIGDKECSL
PCLIERPVVGN-KEIKSLAQ
R------CGDHLLEMDLHAF
RDTLTYNVCMCFAVHCPNLT
VLNMYGIQLTNS--------
--------------------
--------------------
--------------------
---------SLKSLGRHCPN
LEIVNFHRCFQESVVERGLT
SFFSKCQNLREVDVGENERL
TG-----------TAHRLP-
------------FCHDPSXI
--------------------
--------------------
--------------------
--------------------
--------------------
----
>Minc10035_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MPR
TLFD--------ICLSAVCQ
RSTCYDEGDLALLPCDCKLR
LLEYFVSHD----LITSEHC
LSLISRPMFG-----HNLTK
ICLYLSDHLD--DNTLGILA
EHCNNLRY---ISLIECSNI
TDIGIINLTNN---QTKLER
LELVGLSKITSTAFAFVK--
--------SKKLSNVDLSGC
SKISSEGIFNLVYNNPSIIS
LCLNGCSGLDE-QALYDIAH
CIG---ERLCRLELDNLHNS
NIIERVQAIHSLSQKCPNIA
RLSLCQFFPARS--------
--------------------
--------------------
--------------------
-----------------LVD
LETSHMSSS----VDDRFLV
LLAKNCKLLQTVNFNGCKWV
TDKGLAGLARN-KRLREVR-
-----------IRGTSCTDK
SLYSLAQFCPALEWIAHADF
SGRPKFSDQALKCLRDACIQ
RVIC----------------
--------------------
--------------------
----
