>TS_TRISPI_Contig0.d.SNAP.52_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--MPGRVNFSAIFDDVPYAQ
MLSKNQELFIRNMHSRTNIG
------VR------------
---LDYYMRLVQKTILNH--
--------------------
-----------TDPVTSLFS
SPLPGFADHAWVRDNVYAVH
AVWGLALAYKKNADFDEDRA
KCHELEQTCV---------K
VMRSLLQCFM--RQSHKVEA
FKKTQLPKDALHAKYSARNW
NTVVGDNEWGHLQIDAISLY
LLSLAQMTAS----------
-------------GMQIIFT
LDEVAFVQNLVFYIEHAYRI
PDYGIWERGDKTNHGVTELN
ASSIGMAKAALQALNDLDLF
GAYGSPNSVIHVMIDEIQQC
Q-------------------
--AVLKSLLP--RESYSKET
DAA--------LLSIISY--
-------------PAFAMED
WTQINTTRATIMNKL-----
--QGRYGCRRFLRDGYKTPR
E-----------DPNRLYYE
PHELQQFENIECEWPLFFCY
FILDGFFSNNKSQVQYYRER
LEEIVITSEDG---------
-----------------LKL
VPELYAVPSNLVDEEIACPH
SQTRVAA-----GSIPFLWA
QSLYVLTCLIEEGFIQAAEL
DPLNR------------RLS
TE--KRPDTVVQVVVLAEDE
EMKEKLAAQGIEVELLKNVE
---PFI-VQPAHVLGRLFSQ
LG---RSTKMKLSGRMS-TD
VGLLSTSKMYNVQDRIFVFT
PQFLDWQRFYLTHDVNILID
TMKAELFYVKTSW---NVPG
RPLVVMVFSNVMISNV----
---SDDSKKVPLGMIGALKK
MKSGYI-SGTRTILGKISDF
VTTSCIIKLHYLTDDESNID
PKVSELLKSVLCSRRTESGG
ILRRSSKVKHSIGLQ-----
--------------------
--------------------
--------------------
---SEERSRKYSFVRGISQR
HKSIMLDPNEVALITMRDRR
DSFVSSSSTGRKSSTNTD--
--------------------
--EEATPCSSPPVALLSPTS
PLLLRTSASG----------
------NRLNLLDNANNKYG
--------TKDLNEVDCKDL
VEMLLDTEILEEQADIVQYL
WLKQGSNWDTKLG--GRAEV
TVRKLVEELYQKACHQRLWW
LVRHTAGLLNKVTESLTNAV
TDLLVRQKQITVGMPSIH-E
EPISCPLPPLELLKVIR-AA
LVEDECGIMLTQEILIYLGM
FIRTEPHLFTEMLRLRVGLI
IQIMITELARGLHCSG----
--------------------
--EEAATNVTNLSPYELKTL
LHHILSGKEFADRDEENS--
----------EMITYTEKTK
AERTGIMQLGKRMKD-----
--------------------
--------HKIVDVIKSKEE
MN------------MDNNMD
WLQWLRRRRIDGALNRVPPE
FYSKIWLILRKC-EGLLIGD
KVLHQNLT-QEMTTGEMKFA
LRVESVLNKIPDPEYRQLLV
EALMVLT----ILAENQTN-
-----VVLGPGLKEAN----
GDAVM---------------
----------------CCAK
SNKDPCGGTNGVCRHFYDSA
PSGRYGTITYMCRAVISIMP
----HLGEDIE---CAVS
>C14B9.8_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MRSRSGSG
------VR------------
---LDRILFMVEQTICS---
--------------------
----------HQNPITALFA
NQK-DFPGHAWVRDNVYIAQ
ALWALYRAYMKCADFDEDLT
KAKELGFTCV---------K
MMQSILECLM--RQAEKVEL
FKKYQRPLDALHSKFAVGTK
GTVCGDADWGHLQMDAISLY
LLTLAQITAS----------
-------------GLQVVRN
FDEVAFIQNLVYYIETGYRT
PDYGVWERGDKTNQGIRELN
ASSIGMVKAALQALNDVGDL
FVDGSRGSVVHVLPDEIEQC
S-------------------
--AVLSSMLP--RESFSKET
DAA--------LLGIISY--
-------------PAFCVED
PELVSQTRETITQRL-----
--LGKYGCRRFMRDGYKTVL
E-----------DASRLYYN
KSELQQFEDIECEWPIFLCY
LILDAMYSKDDDAVEAYWRQ
LESVLVLSDKG---------
-----------------FRL
VPELYVVLKEHVSAEKAHPG
TQDRVPG-----GATPFLWA
QSLYVIICLLYEGFLLPAEL
DPLSR------------RLS
VYE-KRPPCEVQVTVLAESL
DVQRELRAHDIHVQCVDEID
---PVFTILPASALGQLLAK
IG---ESKKLNLSGRPLDRP
IGLLSTSRLYQIGNKFVIFT
PQFMDSRRSHLMYDIRILTD
EWSSELQYIYASWNSVSISG
RPLVVLVITQGMLSTEGLSH
FSNIHLNRHMKSTVIGAIKK
INTGYL-SGARVVMKDLSDF
FRTTAVSKMEFRDKSAEDTL
RSVA-----AEKVQFTLLTE
DATEAKNEKITTPRGP----
--------------------
--------------------
---------------RTLRR
GESVKDRSAYTAVHKASMRH
RSIALDSNDADLMKLRLAYK
SRPRDLQDMDSTYQSPPP--
--------------------
---TQTPLGLVKEHSSGELR
QQLLKTTRRG----------
--------AENETTHRDLTA
---------EQMNEMKADDL
LDLVNETTVLEEQISIVHCL
WMKFGPDYDTELG---CQHI
TVRMLMEEVHTKACEAREWA
LVRLTAGLLKKQLEELSKAV
THLLVRQKQITVGIASKK-E
EVITCPKTNEELEKIMN-RA
YGDDANSFTLAQEIIVYLGS
LVRTEPKLFLEMFRLRIGLI
IQVLASELSRLRNISG----
--------------------
--AEAAETLLTVSPFELKSM
IFSLLSGRLLEEYAEDG---
------------IHYSDTIR
ETRTGIGSFRRQIEE-----
--------------------
-------RKSLRKSTRSVGG
LEIPKEEDED-EEADEDDFQ
FGIWLRHRRIDGALNRVPNG
FYAILWDTVHKMPHGVKIND
TVLHWGLT-QEMTRKEIKFA
LESEEALNRIAEPEYRELVV
ETLWLLGRLEKLVLLEQPNI
PRDRPLDVDHILHVANQIFV
DHNKHL--------------
--------ETIVMECCASSN
PNNTRCDGARNICKHFYDSA
PAGEYGTSHYIIRALMQLYS
------------------
>14650.m00143_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MLDALFSRDDVMVEHYWTI
MQDIVIS-DNG---------
-----------------LRL
VPELYKVPFDKVAEEKLQRG
SQVREAC-----GAIPFLWA
QALYIICCLLYDGFLTPAEL
DPLRR------------RLS
AY-EKHPPCEVQVSILAETY
EVQQELLAQDIQVQNISEID
---ELFCIQPPSVFARILSR
LG---ESEKLGLTGRPLDRE
IGVLSTSKLYQLGQKFVIFT
PQFMDQKRSYLMYDIRILMN
EWSSELQYIYSSWNNTSVSG
RPLIVLIVAKNMLEADMTPS
-DSSFTDVHMKASVIGTIKK
IATGYI-GGARVVMKNISDF
FRTTAVSKLEFYGHNAEDLX
FKE-----------------
--EEGAMHRNLPCSNV----
--------------------
--------------------
---------------DNLKL
IHPLQSLPEQLSLRSNAERY
SIVYKTSMRHRSIMIDSDDQ
DLIKLYLSYGKQEQSSPN--
--------------------
--STNDKCPPLKRFLSPEKR
TSTDDLIRTSS---------
------AVSLRSTSSGDSEK
K-----LDTAQMDEMSTADL
IDMLIGTSXLDEQASIVHYL
WMKKGPDFDTELN--NMKGA
TVRALMEEIYLKACESRNWS
LIRLSFGLLKRLLDELSKSV
THLLVRQKQITVGMPSKN-E
QAITTPKTKEELHEIFK-LI
YNDDANSYALSQEIIVCLGS
LVLTEPRLFVEMFRIRIGLI
IQVLASELARFSSISG----
--------------------
--IDATQKLFQLSPFQVKSM
LLLLLSGRLLEDFS------
------------MGAESGAK
EQRSGLGSIRKQIEERKSRR
--------------------
-------SMIVSDSTMDVDM
NALAPTDSEEIDVDEAENFQ
FGIWLRHRRIDGALNRVPPN
FYAMLWDTVRRFPRGLSINH
IVLHWGVT-QEMTRREIKFA
LQVEEVLNQIAQPEYREIMI
EALSLLSRMDILLKTDSPNI
PYDQSFVVDSILRRANELFV
EHNKKM--------------
--------ET----VVMECC
GSGKRCDGAQGMCQYFYDSA
PAGEYGTAHYLIKALMDIFI
L-----------------
>Sjc_0035630_Sjaponicum_Proteins.v4.0.short_header.pep_
MWCLKSGSLEHILFPKVFRN
CSTRANTFDVAIIGGGIVGL
ATARELILRYPKFKFAVLEK
EATLGIHQSGHNSGVIHAGI
YYAPGSLKAKLCVEGLKKSN
NDYSYNNFVSSTDCVCVRLL
ILITGLEINPVPFRPIAYPM
RLNPDSQTCAVNILGNLNKS
HTFASSATKISPIRVCYVET
GDWISGYTSFYLKQWIKRNW
IFTLLCLN------------
--------LAFCHSITGLIP
SSP--NSTHAWVRDNTYASL
SIWGLSLVYRKLPDVDEDRC
RSYELEKVLS----------
RIKFIVLVCG---EADAWHT
CLRPKNPIHSLHAKFDSTSY
KTVVGDLEWGHLQIDAISVF
LLILAQMTAA----------
-------------GLRIIWT
LEEVAFIQNLVFCIEHAYRI
PDYGIWERGDKTNHGLPELN
TTSVGMAKAALEALTDLDLF
GADGSYLSTIRVSLDECEQC
N-------------------
--IAIKSMLP--RESNSKET
DAG--------LLSILTY--
-------------PGFSVTD
DELIESTRNAIIRKL-----
--LGRYGCRRFLRDGFRTAR
E-----------DASRLYYE
PWELRLFDGIECEWPMFFAW
LVIDACFREDFDDADRYMQM
LQEVVIPXXX----------
--------------------
---SYSLPVEAIDAEIAHPH
TQTRIPV-----GALPHIWG
QSLYILASIIYDGLLLPGEI
DPLGR------------RMV
TE--PKPDLSVQVVLVAEDN
EIKQQLMEYQVEVQTFEEIY
NEAGIN-VYPARILGQLYRH
LG---ACEKLSLSGRCT-NE
VGIFSTSQFYRLGDETLAFL
PQFFDHHAFYLNLDVEFLLD
CFRTCIGYLKHAW---TSPG
RPLLLFPIYRRYFR------
----SDQTVLPTPLSSSIKK
IASGYM-NATRITLGTLRDF
EETSCLRQIDFSESAQAILQ
RAKSLIHCSSSHRRTTLNIR
PDSFAAYTSDDNHLTTGSSD
SITPCVGGGISPAVSELDSF
ERHTMRRKSMALAHAVSLDL
FNRNAVGWMNDNSNWQSEVD
DQTDGQTDDNGTNYRLLQTQ
NEDLNSKASRLALKRIINPE
NNSPSATSCQQKQQEQSSAN
-------LSQDHHIQQQQQV
DSNINNQTSTPTTFTSQQSQ
RSPSHVVSSEQITPINSP--
------SYSGTHSRRTSDGR
SSGCGLDSTDWLNSLSPDQL
VKRLRCTDNLAEQVEILGRL
HQLRGLDWNTGIDP--TQPA
TVRSLLKEVYERATQTTSWF
LLRYTAGLLGKRADSLAKSL
ADILVLQKQVTVGLPPEPRE
KVIDAPLSPDQLCDLIQ-EA
CGEDSLMTILTQEILIYLSM
FARTQPQQMANIVRLRIGLI
IQMMAAELARGLDLTV----
--------------------
--EDSLYALFSMRPIDTKRL
LHNLLSGEDMRIVKSTQTIS
RKS--------GMSPIKSTN
TSHTNQDNLQVTLDTISG--
--------------------
------SVKKRSVSSRPLMA
SRKQSIVSTEVENENSHADS
RSLWSRRRKIDGALNRVPPG
FYIRVYITLTHV-QGLGIGD
QVLSHNLT-KEMTMGEHKFA
LNVERVCTMVSTPEYRQLII
EAIHVLG--SLMMHDVDNLI
FIDCIVKVDDIVEKANNLFL
IDQMKYGANATLCCAKSLKE
SGITDPTSINNNNNQQSSRR
HSILTCHGLHNICQRFYDTP
PAGKFGTMSYMVRAVSQLLT
CSKCLGPDKRLPINCNIQ
>Smp_149040_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MDKKK---
--------------------
---LDFYFTLLESSILCY--
--------------------
-----------QHSITGLIP
SSS--KSSHAWVRDNTYASL
SIWGLSLVYRKLPDVDEDRC
RSYELEKCVV---------K
LMRGILICYMK--QSDKVEL
LKKTQNPIHSLHAKFDSTSY
KTVVGDLEWGHLQIDAISVF
LLILAQMTAA----------
-------------GLRIIWT
LEEVAFIQNLVFCIEHAYRI
PDYGIWERGDKTNHGLPELN
TTSVGMAKAALEALTDLDLF
GADGSYLSTIRVSLDECEQC
N-------------------
--IAVKSMLP--RESNSKET
DAG--------LLSILTY--
-------------PGFSVTD
DELIESTRSAIIRKL-----
--LGRYGCRRFLRDGFRTAR
E-----------DVNRLYYE
PWELRMFDGIECEWPMFFAW
LVIDASFREDFDDADRYMQM
LQEVVIPESSHSFTPSNSSR
SASRRPSEITTQVLSRTCCY
VPESYSLPIEAIDAEIAHPH
TQTRVPV-----GALPHIWG
QSLYILASIIYEGLLLPGEI
DPLGR------------RMV
TE--PKPDLSVQVVLVAEDN
EIKQQLMEYQVEVQTFEEIY
NEAGIN-IYPAKILGQLYRH
LGKKGACEKLSLSGRST-GE
IGIFSTSQFYRLGDETLAFL
PQFFDHHAFYLNLDIEFLLD
CFRTCIGYLKHAW---TSPG
RPLLLFPIYRRYFR------
----SDRNDIPTPLSSAIKK
IASGYM-NATRVILGTLKDF
EETSCLRQIDFSESALSHDK
KQLN--CVSLCFFFLIFLFC
LFSKTTLLEDILQR------
--------------------
--------------------
--------------------
---AKSITNRTSQRRITLNV
RADSLTGDENHFTVSPGDSM
LTGGGISPVVPELDSFER--
--------------------
HTMRRKSMALAHAVSLDLFN
RNTDQINPTNS---------
-----SNYSGTHSRRASDGR
SSTCGLDSTDWLNSLSPDQL
VKRLRCTDNLAEQVEILGRL
HQLRGLDWNTGIDP--TQPA
TVRSLLKEVYERATQTTSWF
LLRYTAGLLGKRADSLAKSL
ADILVLQKQVTVGLPPEPRE
KVIDAPLSPDQLCDLIQ-EA
CGEDSLMTILTQEILIYLSM
FARTQPQKMENILRLRIGLI
IQMMAAELARGLGLTV----
--------------------
--EDSLYALFSMRPIDTKRL
LHNLLSGEDMRMVKTSTNQT
YHR------RSTAQPIKLMN
TTLTNQDNLQATLDTISGSV
KK------------------
-------RSTAARPLITSRK
QSIVAGVTAEAENENYQTDS
RSLWSRRRKIDGALNRAPPG
FYKRVYITLTHM-QGLSIGN
LTLSHNLT-KEMTMGEHKFA
LTVEHVCTMVSTPEYRQLII
EAIHVLG--SLMMHDVDNRI
FIDCIVKVEDIVEKANNLFL
IDQVKYGG---NATLCCAKS
IKQSGITDLTPSNDCQTPRR
QSTLTCHGLHNICQRFYDTP
PAGKFGTMSYMVRAVSELLT
CNKCFNPDKPLPINCNVQ
