>Sjc_0077330_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MSCLLHDNL
REVYGCDT------------
IDSCFCKEIFFEQVVYFLQT
S------NLVSQLVSLVEEC
NSPIN-----ISNTNLYHTL
DEDNDFLRLLCLFIKLTDNL
NEELNVYLQSIFKSGLELVI
NNIKIMSEIQCIVTSVLSSL
KCENLLQPIWHSYLCLELES
AEN---DSEE----------
-----------------LNV
FSTVICPNITDRKVQILSSA
RNLTHNNSLVSWSALYRHLC
APYIKEAISYRTKLLCSENY
SEQFLNSIIKYKNCVLKKVL
IPRLFS--------------
----------RKDDIREIST
QLSDEIIYKTFYLVHKPDMF
SLVIEYPDSVAALMDLGKCL
DHLP--IRQDLITHLTEEVQ
QRLLHPGVHTEQILAAYNYL
VRALRLIDGTFLVQDIVCKP
VSACLRQ------REDAVRC
IVDKLISGPETDGDGEDEVK
AEAYADTTTELHQELLLPKP
LEVEPLDGGEDSDADIVSED
PPFDSEIHSTTLDKHFIMES
DWKPDPIEALCQRGSWRRKL
DL---------LSMLVSIYG
SKKAFLVEYKQLLSQRLLRQ
RSFHTAR-------------
-------------ELRNLEL
LKLRFGEQNLHECEVMLKDI
RDSKRIANLVSEAMLTDSER
KHVDQTDKLPDSPIQVPNVE
IESLDKTQSKVASLENKTTT
PSVMSFTDATATSNNNNDKS
VGSRCDIAFPLSAYILSIHY
WPELLDD------KFKIPED
FSPVFEHYEQCFQRLKGNRT
LNWMHKLGLVNIDLTLGKRI
V-KIDVTPLQVSIIYLFTKQ
RTWYIRDLAQKLESQISTVR
TGLYMFIQLGFLRLSDSRPD
LYDNNHLTYTTSENLEVYEV
CDETDTTESGEKLNNNLNCV
NHSNDSGKIDTNTIETTNNW
IFTSQDHSDSLVTSVRERKE
KELQVFWSYITAMLTNLG-S
LSLDRIHSMLRMFALGSTSG
LEFSKDELRRFLDR-KIREG
QLGCDGDVYKLIISDL---
>Smp_152400_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MSSSLHNDL
RGVFGCD------------A
IDSCFCKELFFEQIVYFLQT
S------SLASQLSTLVEEC
NCLVN-----ISTINLYHTL
DDDNDLLRLLCLFIKLIDNL
NDELSAYLGSILDSSLESIM
NDNRIMSDVQCLVTSVLSSL
KCENFLQPLWHSYLCLELES
AEM---DTEE----------
-----------------SNI
FSSIICPNITDRKMQILLSA
RNLTHNRSLITWNNLYRHLC
APYIKEALSYRTKLLCSENY
TERFLDSIIKYKNCVLKKVL
IPRLFS--------------
----------RKSDIHEINA
ELSDEIVYKTFYLVHKPDMF
SLVIEYPDSVAALMDLGKCL
DHLP--IRQDLITHLTEEVQ
QRLLHPGVHTEQILAAYNYL
VRALRLVDNTFLVQDIVCKP
VSTCLRQ------REDAVRC
IVDKLIS-------------
--------------------
-GPETDDPPFDSDIHSANSD
K-------------HFLLES
DWKPDPIEALCQRGSWRRKL
DL---------LSMLVSIYG
SKKAFLVEYKQLLSQRLLRQ
RSFHTAR-------------
-------------ELRNLEL
LKLRFGEQNLHECEVMLKDI
RDSKRIANLVSEA-------
--------------------
--------------------
----------------TNLS
NNNVNNIAFPLSAYILSIHY
WPELLDD------KFKIPED
FRPVFEHYEQCFQRLKGNRT
LVWMHKLGLVNIDLTLGKRS
V-KIDVTPLQVSIVHLFTKQ
RTWYIRDLAQKLESQISTIR
TSLYMFIQLGFIRLSDSHD-
---SNNHVNFTSENLEIYGV
CDETDTTNSDERLSNS-NSK
NYSNDPEKIDSNTIEATNNW
MFTSQDHSDSLVASVRERKE
KELQVFWSYITAMLTNLG-S
SSLDRIHSMLRMFALGSTSS
LGFNRDELRRFLDK-KIREG
QLSYDGDMYKLTIPDV---
>Mh10g200708_Contig290_4120..6374_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MWK
DRGKNVISSIKKLIHNYELY
--------------------
------SREAFSIALEKLIR
EKLLHVGVNTHDILQAYATI
IECLSQYDPSFVLVHRICRI
IRDYVKQ------RPDTMRT
IITFIAIEKPGDSCLTSDIA
VTNANRLTLMLEEE------
-QLNGLNDEYVIMMSDNREN
R-----------------WM
DWIPDPEESRLFRESAD---
----------VFNMLVSIYG
SKDLFVKEYQNLLAERLLSN
GWERHIHS------------
-------------EFTYLET
MKKRFTEGELNHCEVMIRDI
RDSWKLARFAAP--------
--------------------
--------------------
--------------------
-----SLPFPVSPRIVSFVY
WPEIQPNDLDNNFPFRPHPF
FREALDAYEKVYSQHKAARS
ITWHSDFGSQVELELEIDGK
VLDIELPLPQAQILFLFTEK
EKWILSEIAEKSNINISQLK
KRLEWLCSKGLIFQG-----
----GLDEITLEETFCLTSS
PSSIQISEKRDEAA------
--------------------
MLDDFSDDEEEEQNSVEDVV
EELEQYWNYTKNLLIYRTTN
EPLTAQYLHRMFKNFTSPGK
TIPSLDAVQMFMHR-KVRQN
LVVIENGVYKATKDLK---
>Minc04287_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MWK
DRGKNVISSIKKLIDNYDIY
S-------------------
-------REAFSIALEKLIR
DKLLHVGVNTHDILQAYATI
IECLSQYDPSFVLVHRICRI
IRDYVKQ------RPDTMRT
IITFIAIEKPGDNCLTSDIA
VTNASRLTLMLEEE------
-QLNGLNDEYVIMMCDNREN
R-----------------WM
DWIPDPIDADPKESRLFRES
AD--------VFNMLVSIYG
SKDLFVKEYQNLLAERLLSN
GWERHIHS------------
-------------EFTYLET
MKRRFTEGELNQCEVMIRDI
RDSWKLARFAASSLPFPVSP
X-------------------
--------------------
----------------XXXX
XXXXXXXXXXXXXXXXXXXX
XXXXXSN-----FPFHPHSI
FKDALDNYEKVYSQHKAARS
ITWHSDFGSLVELELEIDGK
TLDIELPLPQAQILFLFAEK
EKWIISELAEKSGINSTQLK
KRLEWLCSKGLIFQG-----
----GLDEITLEETFCLTSS
PSSIQIIEKRDEAV------
--------------------
MLDDFSDDEEEEQNSVEDVV
EELEQYWNYTKNLLIYRTTN
EPLTAQYLHRMFKNFTSPGK
TIPSLDAVQMFMHR-KVRQN
LVIIENGVYKATKDLK---
>14271.m00286_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
TSSSSNEVVVMRDPEKGYAL
CREFVTATILPRFRRAVVQM
LTLPN-----------HYII
SALHETVISIENVID-----
----KKIRKIMVGNNHSAEY
LRTRVLHFAGNILFKSDIER
KMKMLMSNAFKVSFLLYETL
EEK-----------------
--------------------
--DNEISVCHESVLVMLRET
VMHLIDPNSFDVMSVVFQAH
NQAVWHIIANMAKRKCAIST
ELISLSDNTKRCQRITDWTV
IIGLSR--------------
--------------LKPTKK
TLQQAMEKCFITTLAEKIYN
FVIVEYPQSSGVIDDLRCCM
QNNGGFGRMLLMDTLTKDVE
QRLLQVGVGTTEILEGYASA
VECLRRLDPTCVIMQQICSI
IRQYIKQ------RPDTVRC
IITYITG-------------
-EKREELSEQLAMR------
-RTAFLDEEELVGVNDELVP
E---------------RNWM
DWLPDPPDANPCQSRRYRQN
AD--------VFNMLVSVYG
SKEIFVKEYRELLAERLTKS
WNRDPQF-------------
-------------EQRYLEL
LKLRFSEGELQQCEVMLKDM
RDSEHIDCLVDN--------
--------------------
--------------------
--------------------
-----LLPFPINARIISSFF
WPKIENE------EFTMPQA
LMIGLDEYARGFEAHKGSRK
LEWMSAVGSIELEVELDDVK
A-VVAVSPAHAAVLSLFTKK
ETWTVDEMAAELKMDKRNVK
KRLEWWQNSGVVYASAGES-
----EAKTWHLAS-------
--GTSKMERLQVEH------
--------------------
--DMEEDISDDDKNEDMEAV
DALEQYWIYTKSFIANQE--
-PVKAERLHTIFRMFASPGQ
HGPTLEDVVAFXQR-KVKLN
LLSCVNGLYKVVKDAPAQ-
>K06H7.6_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MSIFDRMTTSKEAAM
KYRQFCVSKKKEVWDALIYH
AKYAKN-------------I
EKVYDMTTVLQRVQQ-----
---ECLMFALEKGVGQPDIR
DAAELIFPLAMQKVVIKVLR
PYFMSHFTNYRLAMYLPHRK
IDHG----------------
-------------------I
DLNQELWTPEKKEICGQYVQ
DFNPFVNELKTGILNANRHM
NAALSVYIRELAATLVMHEK
AAFDNELRCSMFQEIMESLR
IWS-----------------
----------DQVTMQDAFH
LISDTIYKDVFQMLSKNAYE
MIAVDFPVKFRSLITMKYCL
LRTNNHGRVDFTNYLIDQVN
TKLLVASVDTKDILKAYAAC
VESLREMDNSCVVMHKVCGV
IREYLKR------RPDTVQQ
IISYITS-------------
-NKKNELEKDMSLQS---KT
VRSAMMDEEELKGVNDDFLP
EN-----------METLGWE
NWMPNPTDATVGDGAPGHQG
VD--------VFNMLVSVYG
SKELFVKEYRNLLAERLSSS
DNKDPEF-------------
-------------EKRYLDL
LKLRFQYSELQHCEVMLRDV
IHSLDIDKKFED--------
--------------------
--------------------
---------------MSERS
AGNYDVPIIPISACIISSHY
WPKLETEKT----EALMPQP
LQAAMDVYQETYLDVKRDRK
LEWLRSVGCVEVSINIDGVE
V-DRTIPNMYALLLFLFLEK
ETWTTAEVVEKMGMSVVVTR
KRLEWLVKQGFICMNPIIS-
-----SDTWTLTRN------
PSGISIVRPGTP--------
--------------------
---DLEDDEDVEPEENSDMV
DALEQYWGYTRNFIANHAPN
GEVKAERMHRVYRMFGSPTS
AGPTLDHVSAFLQR-KVALG
LLTCINGSYRIIQEKKDGE
>TS_TRISPI_Contig140.SNAP.2_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MRLNGREM
QYIVEPCCACIILQFANNIE
ISIAELCEKLKAPYKEIERS
LNFWFQAG------------
VLGSKKN-------------
--------------------
--------------------
-------------------A
NWYLRPSSNWVSQACIGRRP
CE------------EIGIED
EFAISEEDGEDAINEYILSL
EEYWPTMR------------
-------------------G
WFQRFESLTPDRAYLMLKIL
VRQK----------------
--------------------
--------------------
--------------------
--------EMLTVDIVKRYF
QMKLEQG--------ALISD
NDANSDGWQCLPLKFFA---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------
>TS_TRISPI_Contig30.SNAP.68_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MASEESEF
YPCNECTR----------VF
WTEFEKEKHVLSCHTGALVW
KGVRLMYPSCVQSNCRFIFE
CELKNRILPEFFDEIEKAID
EHVLAGKIISKNILKYIDVF
NRAVSVLYVNLKKYENGDFE
LDWRSIVEEFKKQYHSLNPV
KFEQLFEVLYRVWFWIYFSD
QASIDVKRIG----------
--------------------
---ERVAWFVQKTQLAAIAL
DFRIPELSLLCLRIAQGMVR
DKIVIVVRRLEEYEFRGLQN
IFSYLKKVVFGWLYVVMRRK
VMDPFAG-------------
--------DIDVNTFLLRCE
ANLQMATFEIYGRTLISMVF
QLIETFPSSYQIWMDLRYCM
QRTGPCLDGDFINEVKKFVK
LRILAQNTTTARILILYIKL
YRALHIVFIPDSMATGIFHN
IQAFLKS------RCNLLSR
AIALFRR-------------
PKLMKYLGQELCFN------
--PETFPDECTN--------
-----------------ELE
NKFKYPVESLMDRPGIYPAT
GKN-----FITARMLIDLSG
SQQDFFNEYRKILSAKLIRR
FYHAVSMLS-----------
---------ICAFEYHILKS
IDSPANSDYHYQCQMMVRDV
FNSKTFEISYSEK-------
--------------------
--------------------
--------------------
MMRENIKLMPVHCIVASANS
WPEFAKES------LVLPDS
IGEYFAKISEYFKQWKRSRI
LHLIPNLGSVHLQMRLNGRE
M-QYIVEPCCACIILQFANN
IEISIAELCEKLKAPYKEIE
RSLNFWFQAGVLGSKKNAN-
-------WYLRPSSNWVSQA
CIGRRPCEEIGIED------
--------------------
---EFAISEEDGEDAINEYI
LSLEEYWPTMRGWFQRFESL
TPDRAYLMLKILVRQKEMLT
VDIVKRYFQMKLEQGALISD
NDANSDGWQCLPLKFFA--
