>14890.m00117_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MSVQ
RFEFPRPSITSQ--------
-----------QPELMQSSF
ATPGFPTPSFVDPTHSQ---
--------------------
--------------------
--------------------
--------------------
-----------PPPAHQRID
HSTTAFQFPYATVVPTAIAS
ENHRVNQQS--LRNGPSSLQ
AIPAVNES------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------LS
SDKLCAVCNDRAVCQHYGAR
TCEGCKGFFK----------
--------------------
-----RTVQKKAQYVCTGNK
NCTIDKRFRSRCQYCRFQKC
IAVGMVKEVVRYGSLSGRRG
RLPSKTKVQHS---------
--------------------
--------------------
-------DDPPSPPLPL-LT
LINKAYVESKTIP-------
--------------------
-------------TPTLYNG
GTEQLLSAMDEEFRFMLLFV
EKIPNSTEISQNDITKLIEC
NFFALLALKLCYG-------
WTEGNNSLHMEQIEVDIAAV
PQP---------------LK
LLFTLIQEEAKRFQHLIQWD
PPSFSALLALQFLNTKECG-
AELLSSDAAVDKLRGTITSA
LKDHCCNSSPPHTKKLQTII
AQIEMFTRFQRIGQETLSLA
VSSGVQLPP-LMSGAVQTAQ
RFPGPSKLDFTEFSFCP---
------------------
>Mh10g200708_Contig1683_11947..14704_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MQLPLQLQNQQFT
MSQFQHPQQQQKHQQTYQQQ
QQRRQTISCSVVTTINQQRQ
QQNPSILTMAGQQQFMPTSD
LIAQQSGSFVQSAANLMRGF
EG------------------
--------------------
--------------------
----------MFATDPHVVQ
LGGGTNIIPPISSSAMTSVV
PHLPPSIRG-------SPLS
AANAAMLSAAFSSTSCSSSN
TAS-----------------
--------------------
--------------------
-------------ALVSSSS
SNTGICQNVGG-----QSFI
GGGSPSTS------------
-----SSHHQLEDE-FSQMD
EQKLCAVCNDYAVCQHYGAL
TCEGCKGFFK----------
--------------------
-----RTVQKKSQYVCSGNK
NCPIDKKYRSRCQYCRFQKC
LDVGMVREIVRYGSLQGRRG
RLPSKVKSSSITSP------
--------------------
--------------------
-----TSSMSSTSCIQMSLG
QPEPAQSPPLPILTIISKAF
N-------------------
-----EMHGQFNRREIKQHL
SLNEFCSLLELELQNIWGFA
RRIPDIVELNEAELRLLVLH
NFFPIFAVRQAFR-WAELKT
AQISEDFWFEGGICLKTEEL
PLE---------------WR
KWFGEVAAVAHAFRLLVDWD
IPCLASLIVLQLFKIGPN--
ISGMINQSSVDRFNSTYINA
LKDH-------CCQSSTQ--
--PSKLSRIVQQVSQFEPLR
QLGTECLGS-SLRHLTTQPS
QTLTQLFLNSGGNLKIGGGG
GGASTSNTTRY-------
>Minc15270_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MIGAG
NSVPMLRNRASVMILILESL
IST---MKKITDGEYNGIKG
KDLNTLRTEAIT--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------FMTATMLINI
SFPKIYK-------------
--------------------
--------------------
-WFCEVT--AVNFRMLIDWD
FPCLASLIVLQMFKVGPS--
ISGTITRTSVERFNSTYINA
LKDH-------CCQSSTQ--
--PSKLSRIVA---------
--------------------
--------------------
------------------
>C48D5.1a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MEQLSIQTDELQDQFSNCS
PASVDSSYSSCSSVEDEIEI
YTRLVRNEEPLRRDFFREMS
KNSSCSSSFDYGEFGPSSSS
RKGSKTTDADLDSLFHSLVE
TS------------------
--------------------
--------------------
-------DQVNTVPKPTKTE
VESIPEEFEQKPSSSSHRLP
SEMNASITHIKSELDPTMQA
FQMPHNDLFLATAAPHYNPF
ALSNDFMPNPLMPSFTSPFY
PQHFP---------------
--------------------
------------VSDSRRGS
QGTTSSSNNTG----GTPSP
HSSSLPTSPPQLQGFLRSFL
NPDNLSTPTSFGVPSETALD
ADKMCAVCNDRAVCLHYGAR
TCEGCKGFFK----------
--------------------
-----RTVQKNSKYTCAGNK
TCPIDKRYRSRCQYCRYQKC
LEVGMVKEIVRHGSLSGRRG
RLSSKTKLARS---------
--------------------
--------------------
-------EDQPSPPLPL-LA
LMGKAIEDHTNMT-------
--------------------
-----------VVRQFMQPF
DETIALRILHGELHATKKLL
MAMPQISEIQPADFQILLSR
SFFAIMAIRVANR------C
GNSTDTIMFESGELFSLNAF
PAC---------------FQ
QIIRFMVDKARTFSSLVDWE
PQAFAAFIALQFLAGNTEHN
VLGLTNKPLVDQVQSTIINA
LKDH-------CSGSQNK--
--LAKIVRLTQEFDVFHALG
LQALDILYPSHQLPEEFMFL
INLTRAPLRSTDAPPACGSP
VAPSGSSLFNFQMGPAAF
>Sjc_0048460_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MNSN
WRQLERIAQDRVEWRR----
--------------------
--------------------
----LRTIQKNAQYVCLQAK
NCVVDKRRRNRCQYCRFQKC
LKVGMVKEVVRRDSLKGRRG
RLSSKARCQLN---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----EHGGLTNFYNDTNLKQ
NLLPLHNFLHKRN-------
-------SLCNNLSLINNSK
RYTN--------------CN
LQLNTMN---RTNSCHVNST
VTLLSMLSRAYEIVGPRN--
-HSIINNNEIDSMEHDELNV
DVND----------------
------SLQVTTLNDMKVS-
--------------------
--------------------
------------------
>Smp_139200_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MNSN
NSNITNSNGNSNNINNDLCL
N---EFDNFLHLTPSNCNCI
IDCKGDVDDDGDGDYYVTVK
DNNNALNDYKGNTNKLFQKK
--------------------
--------------------
--------------------
---------FPPKSSLYNPL
DIENKSSCYGDKSTTTTTTI
LCNKLNYNN---YNDTILLN
NNKSNTIIHNIDSYHCLNGI
ESLNEKHIKLYNEHNKCLSP
SLLSS---------------
--------------SSSSSH
SSSSYLTG-----NHSTPTP
ISIPSTSSSTS-----SSST
LSLSSTSTPSIISSKVSNYN
-------LNDLNSITINEID
CHQLCLVCGDNAACQHYGVR
TCEGCKGFFK----------
--------------------
-----RTIQKNAQYVCLQAK
NCVVDKRRRNRCQYCRFQKC
LKVGMVKEVVRRDSLKGRRG
RLSSKARCQLNEHGGLTNCY
SDGSINKNLLPLHSFLHKRN
SISPNYTSINGKRYSGSNIQ
LNNSNRTNSCTVNSTVTLLS
MLSRAYEMVGPRIHPVIVNH
DNSFIQSHECSKKHDVSNGE
VG---DSLQTSPDDTQIDEQ
YTTKFCSILEESMNELKHYA
ELVPGFMNLSMNDREIMLNL
HFLDLLSFRLAWR---VAME
TEVTTHLNYAPTLFIENHSD
NCTKLN---------QIIHD
NTLIDKTHDISSSMKMTPIT
TTMVTTTSAVTKTDTSSNYE
NIYAPTINNWNPQNHSEIEC
YKTN-YLLNNSSSKNYQKQI
EFVFENGKSMSYYELLKSGF
GNWANQIQQLSNQLKLLIQD
DYNAIWGLAALILVNYKSIN
CKFPFFFFTSLD------
>TS_TRISPI_Contig6.a.SN.172_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MPSM
LGTSETALLSALSETQPLDK
DMLYVEQMHRARQFFGATPQ
ISGAGQASTFVEEPTTMWCD
LPGSSYKMFDRPYREQQPAS
G-------------------
--------------------
--------------------
--------LTVLPSSCLSSN
YVRTEDQYPQLHAAESASSC
TQQAPTYFP-----IAPNEP
SLPSTYGYLTGTTTPQTAGS
RMQQRITRAFSSPEIETPQL
ASMLS---------------
--------------------
-------------AYANPDS
IDTIAHSSSTFG--------
--------------------
-----SSSLAPSG---SPSQ
TNQTCAVCGDHAACQHYGVR
TCEGCKGFFK----------
--------------------
-----RTVQKNAKYVCMGSR
DCVIDKRRRNRCQYCRFQKC
MAVGMVKEVVRMDSLKGRRG
RLPSRSKVADD---------
--------------------
--------------------
-------SSSTSLTSSLVHA
HMVHVIAKSSTEA-------
--------------------
-----------MAPGDFFMN
TDESLLSSLNYSLAVVHRWA
ERLPGWSTLSASDQRQLLKA
GSMNVMHIRIAYR-------
--------------------
--------------------
--YNTQFYRSTCYYYLLDLH
HNNHNVI-------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
