>TS_TRISPI_Contig0.c.FG.16_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
-------------MIEDRRY
CTMEETGAGGGRESTFVMN-
--------------------
--DSMFKDLYPSNEPTGVDS
VQLPYYNGKT-TATGEQQHY
TPLSAYPCPPPQYN------
--------AYTSTQQSGLHL
IQTPTPGFSSS---------
--------------------
-------AGGNQKAFVPCKV
CGDKASGYHYGVTSCEGCKG
FFRRSIQKQIEY---RCLRD
GKCLVY-RLNRNRCQYCRFK
KCLAVGMSRD-----SVRYG
RVPKRSRDRMQEDVR-----
--------------------
--------------------
--------------------
--------------------
--------------------
---VTSMTGESEVDNEVEKH
QLALYD--------------
--------------------
--------------------
--------------------
--------------------
-----IILSVSQAHHSNCN-
--------------------
--------------------
--------------------
--------------------
-----YAEDKVRNLS-----
--------------------
--------------------
--------------------
--------------------
--------HRPMHFPIERRF
TMTNGERLIPIGNMME----
--------------------
--------------------
--------------------
--------------------
------------QQKIVMWE
TLSQYITPEVQRVVEFAKRL
PHFTDFL-QGDQLVLIKGGF
FEVWLIRISRMLNVQFGTMT
MCDGSFLGRDQLDVIYN---
--------------------
------------------PD
LVNAIFQFAAGFNNMHLNDG
EIGLFSAVVLLSAD------
-RVGLSDPKSVETQQEKLIE
ALKLQLTRNH----------
SSDPQALSSLILKLSELRSL
T---------------ARHN
DVLMWYRANYRRVKVP----
-----------PLFSEIYDI
PRDDVEMGVGDVAVSSTHQI
SSNSHESP------------
----------VSTNHAAALN
YPQYVVDVKGPMMDPTLKPD
NVA---------------
>14972.m07826_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
----------MSFVTSAPRR
PVPSNKASTESVFLPARKSS
TSVIPEPTAASVPYNATPQC
PVDIIQNNWNGSSGTFPQLE
FIQTSNFQQPDTRSAVIPQN
ETTNSTNGYV-IPSGNYNGV
QSYPQQTRLPDVR-------
----YCDRSYYGNESANNGQ
SRLASRTTDELY--------
-----------------P--
-------DSSTDNKPALCKV
CGDKSSGFHYGVTACEGCKG
FFRRSIQKQMEY---RCLRD
GKCHIH-RLNRNRCQFCRFR
KCLAVGMSRD-----SVRYG
RTPRHKGDEIDNENIP----
--------------------
--------------------
--------------------
--------------------
--------------------
---LWEETSKFTHYEVADVT
NARLQN--------------
--------------------
--------------------
--------------------
--------------------
-----FIESVTKAHLTCCNY
VP------------------
--------------------
--------------------
--------------------
-----STLKDLKPG------
--------------------
--------------------
--------------------
--------------------
------------------VI
HRLPHTKLPSAN--------
--------------------
--------------------
--------------------
--------------------
--------------RQHLWH
SMNEALFEDLGRFIEFSKRI
PGFITIS-HKDQILAVKTAF
FEVWLVWISRTMNSKTGTLT
FSHGITFSREQLSIVYG---
--------------------
------------------LV
LVKQMFEFGDNFRTYKLSEC
LLGLYCAVLLLTQDN-----
-IPKLEKPHKMLILRERVMY
ALKLQLSTER----------
PEESELFHSLLVKRELLRSI
A---------------VRHQ
MALDWYRVHLDLIRLP----
-----------QIFVDLYDL
DGPKLASRSSFTDS------
--------------------
-----------VASLEADQT
IKENVVGKRDVDSTSEDDSD
------------------
>Minc14819_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MFKKADDTAMDYVN--
---SRKKRLA-CNRITG---
--------------------
-------VLFCGCRCGG---
--ECIGEAPYL---------
--------------------
--------PSYIVPGQKCSV
CGDLSTGLHYRAITCEGCKG
FFRRVYQREPRFVCKSKLPN
QKCPIS-KTTRNDCQRCRLE
KCLDAGMDPQ----------
------FNRKS---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MSTIKSLCV-----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Smp_134490_Smansoni.v4h.longest_isoform.pep_
--------MNLPITTNLTNI
WSSVTTTNLSQLPVQQQQQQ
QQHQQTTDMQQPFIGNYNNS
NPPVTELVNLISTPSSSSSL
SASSSSSSSSSSSSSSSSSS
SGRRINDSQSYWNGITLLRE
TIPSYYSNSIGSSILCPIIN
PSIVSQSSIN-NCTMNYSNV
PNSLHGSSSSSSS-------
------SGNVSSTTGNGTTK
VPRQRKKDPYIP--------
-----------------S--
-------YMDPANGPEPCVV
CGDNATGFHYRAMTCEGCKG
FFRRSVQKKLVY---TCKYN
GRCSVSDKQNRNSCQKCRFD
RCIKGGMAKDLVLDEEKRLA
KRRLIEANRARKRAESDNAI
QQSQINSGPSPPKQTSYLPP
TPSSISSAVSPLHRSPLMSQ
QNVISAQIRQSQIKPPMVTT
NQSRSVLHNYPSITAQTGVM
NFTNLSPTDGNSTQLHISTN
LSPTIQSSTNNLDQHNSTSI
QPTIYDPNCAMLPLLQTSPT
RNNLIYSDGNSPINQHSHYV
STNHHQPHHHQHHQHHHQQH
PTGHPLQVPTTDLMPNNTLH
SSSLVNISSSIPLDESNQLY
WSNNSTIENTFHHHHHPLTT
IHSGINPIHQHHQLPLQQHQ
NNFIQPIVTDQSWNNEQFTQ
SIIDTGNNISQYCPVSLIND
TLSYDQHQRNQHPHHHHQHH
HHDHHHQQQQQQQQQQQQQP
SSMSHQTHDVNLVMKQTNPM
NIFHFDPLIKNDDVSGMKIA
KLDERKFTMPITSINTPSTI
NSFSNTDYSSSLSSSSSSSS
CSLSSSSSLSLSSSSSSVTL
TKNTEDQLQLNSKNDDTLNV
TDELFVWTVDDQNLINSICN
AYESTYFDKDSPNNKTIQNQ
LSGTNNKDVTQSGDNSQQNS
GEFVIKSIVDSHVTGFLTKL
DEVEQEDIQHARTFYMTTFH
DLAYLIEPAITRLVKFAKQI
QGFDTLE-ADDQIRLLCGCC
IDLITLRAAYCLSKSAKIQG
LVDHSLLIRGPITTATTPPT
TTSTSRPSNNQSNLTHQYNT
ITPPYIPNNQYPKLGISDEK
CAQLIRGVALKMARLNIDQT
DVAMMAAILLMSPD------
-RSDLLDVESIENNQNNLLE
TFNRYVNRTRGQIKQSGLYP
VSSSQCWPRIIMTLTELRSV
T----------------MCA
QDLFSQTYGMSDNNNNNNQ-
---------LPWYLHELFLA
DEKINTME------------
--------------------
--------------------
--------------------
------------------
>Sjc_0050210_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--MQQTFIGNYNNTNNNELL
TLVPTQSSSSSSSSVSSVSS
SASCSSSSSSASSLPSTSLS
GRKINEQQSYWNNGITVLTE
TMPSYYANTVGSSILCPIIN
TPIPSQSPLLPNCSVAYPNT
LNSLQHSSSSGNISSTX---
----XXKFRDNGKFSNGFLN
KVDLLHEISILNNLHQTILF
SNKDYSLFICFHYYFFSDFT
EDPYIPSYMDPANGPEPCVV
CGDNATGFHYRAMTCEGCKG
FFRRSVQKKLIY---TCKFN
GRCSVSDKQNRNSCQKCRFD
RCIKGGMAKDLVLDEEKRLA
KRRLIEANRARKRAESDNAV
VMQQNHINSGPSPPKQTNFP
PPTPPLPSTASQLHPSPLLS
QQSVLPQIRQP---------
--------------------
--------------------
----QSQQIRPPMATVNQQQ
RSVLHNYG------------
--------------------
--------------------
--------------------
--------------------
-AITAQTGMVNFANLSPTDG
KSIQLRISTNMSPSAAITAS
AATNLDPCGSASIQPTIYDP
NCAMLPLLQTSPTRNNLIYS
DGCSPINQHNHYTSTNHHPH
PPLHHHHQQQQQQQP-----
--------------------
--------------------
--------------------
--------------------
-----HRQHPPIHPLQTQTT
DMMSNNTIHPNSLINLSSSI
SLD-----------------
--------------------
--------------------
--------------------
-----GSNQIYWSGNSTINE
TLENTFHHSLTTIHNNVNQL
HQHHHHH-QNNFIQPLDSNW
NNEQFTQSVIPTGNNVSKYC
PINLPYESNRNHHPHHHN--
--------------------
-----------------HHQ
PQQQQQQQNQDINLVMQQTN
SMNIFQTDPLINDNTNNNNN
NNGNITQTDDINELKITKLD
ERKFTTPSMISMHN-----S
LSTVNPFSVVAYSLPSLSSS
S--------------VSASS
SSSSSCSMSSSLCSTLSSVS
TVVNNTEEQLQLTLKQNGND
DDDDEDEEDDVEKLVIKNND
LFVWG---------------
----------VDDEKLLNSI
CNAYDSTYFDKKNAVSLYTL
F-----------------
>14065.m00027_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------IPYL---------
--------------------
--------PRYMKPGQPCVV
CGDDATGLHYRAITCEGCKG
FFRRTVQQNIVY---KCKGI
EXXEIS-KSSRNICQFCRFQ
KCMDNGMMXSLVLNETERIA
KRKMISDNRERRK-------
--------------------
--------------------
--------------------
--------------------
--------------------
----MEQLRAVLRTNSLADK
QDEFQT--------------
--------------------
--------------------
--------------------
--------------------
-----RINQVTANYCKILDS
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------SL
EYKFKSDIKS----------
--------------------
--------------------
--------------------
--------------------
-------------------E
RLLELTELVTQQIRQFAETI
EIYDSLN-HSAQEEIIEKSW
LVVKVLQIIHEFNPTERCLM
LANNTTYIAARGDYSELD--
--------------------
----------------YTTK
IFENLINLAASFHCMQLDNR
QLALLSALLIYNPK------
------------NVKEC---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>13089.m00015_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MKQKMIS--------
--------DNRERXKIEQLG
AVLETNSLAD----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------K
QDEFQT--------------
--------------------
--------------------
--------------------
--------------------
-----RINQVTANHYKILDS
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------SY
EHEFKSDVGS----------
--------------------
--------------------
--------------------
--------------------
-------------------E
RLLELTELVTQQIRQFVETI
EIYDSLN-HSAQEEIIEKSW
LVVKVLHIIYEFIPTEHCLM
LANNTTYIAAKGDYSELD--
--------------------
----------------YTTK
FFENLINLAASFHCMQLDNR
PLALLSACLFKIRKM-----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>14366.m00015_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----LTELVTQQIRQFAETI
EIYDSLN-HSAQEEIIEKSW
LVVKVLQIIHEFNPTERCLM
LANNTTYIAARGDYSELD--
--------------------
----------------YTTK
IFENLINLAASFHCMQLDNR
QLALLSALLIYNPK------
--NVKEXEEKIDKVHMELWK
CLQSISEMHDDD--------
SIDLHYWPNLLVRISQLLVT
VT----------------NM
RRFFRDQNNINSIAN-----
-----------ILLFKFS--
--------------------
--------------------
--------------------
--------------------
------------------
>Minc16037_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MAPPRIR---
-RVRSRVVPYLP--------
--------------------
---------SYIVPGQKCSV
CGDLSTGLHYRAITCEGCKG
FFRRVYQREPRFVCKSKLPN
QKCPIS-KTTRNDCQRCRLE
KCLDAGMDPQ----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----LVLDEVHRRAKRGLIE
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
KNRSRKRLIG----------
--------------------
--------------------
--------------------
--------------------
--------------------
-KLISIKKAQFRGVSPKLIL
SNFSKLHSESNYQYNLRPAL
LLLMVLNIEENFEGKFGGIT
FKIKINKGGWTLKNINFKN-
--------------------
-------------IREIKKE
FNKDFYFISQKFVELELTDD
QISLMSILLMLKKEQ-----
-SDDVMKEVRQQIFRLLLYA
TVGNVAIGESED--------
HRLLEHWPVVLLRLLQLEKM
S---------------EKYG
EILDSMGISGEFNLLH----
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Minc14817_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MVKIWDPGKLVG-
---------IMQSD------
---DVLKEVRQQIFRLLLYA
TNGNVAIGESED--------
HRLLEHWPVVLLRLLQLEKM
A---------------EKYG
EILDSMGISGEFNLLH----
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Mh10g200708_Contig986_6121..6994_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MGR
LMRIQKAQFREPFPNDGQNK
NDRHTIQLFIN---------
-YCAKSFWTVFSDIPSTYEN
KVEFCGLSSG----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----HLCWSLGVCKFAQTVL
SNFEKIDSKHNLQFNWRPVL
FLLTALHANIGENGE-----
--------------------
--------------------
--------------------
---------GKFEGNEINRG
---------LWTPK------
----IKENFGQKLLKALLYA
TVGNVSTGESED--------
QRLLEQWPVIMLRLVQLEKI
S---------------EKYS
VILDSMAMSGKFNFLR----
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Minc14818_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MSDKTLKSLVLDEVHR
RAKRSLIEKNR--------S
RKQLIG--------KLISIK
KAQFRGVSPK----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------LVL
PNFSKLHSESNFKYNLRPVL
LLLMVLNIEENFEGKFGGIT
FNIKIIKGGWTLKNINFKN-
--------------------
-------------KREIKKE
FNKDFYFISQKFVELELTDD
QISLMSILLMLKTED-----
--------------------
--------------------
------WCVLAKRFYHLFEV
DL------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>F44A6.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
----------------MSFE
TKPNYLLLTNPDTPLSVCTS
PYYSPSGKTASIPSSEASKP
EGTNGQWSHLPTGATYVTDE
FSSEFQIQNGSTAAQSGNAN
NYADPLSHRRYFNNVNGYNH
HQFYDTASQASVS-------
--------SPATSVTSSLSP
PDSLSNGHTTQR--------
--------------------
--------HHIGKAISFCKV
CGDKASGYHYGVTSCEGCKG
FFRRSIQRKIDY---RCLKQ
QVCEIK-RESRNRCQYCRFK
KCLDSGMSKD-----SVRQM
KFRN--AMRDDKS-------
--------------------
--------------------
--------------------
--------------------
--------------------
------PDSVFVPEISTLER
QEEVDA--------------
--------------------
--------------------
--------------------
--------------------
-----VYEAVLRAHTTFSFY
T-------------------
--------------------
--------------------
--------------------
----DIKIRSIVARP-----
--------------------
--------------------
--------------------
--------------------
-----------------FNV
RINEDSKMN-----------
--------------------
--------------------
--------------------
--------------------
--------------RLNAWQ
IYAHEIDVDIKEVVNFVKEI
PKFNFIN-GNDKAVLLRKNA
FPLYLLRIVR--GMSNRGLM
LRDGRLIDFKSLQLLY----
--------------------
------------------GS
LADEMLAFANHIITIGCTDG
DIALFIVLILCQPLT-----
TEQQFSTNFKSQLQLLEMFD
FYKKVLFQKMTCR-------
IDGCDTYKQLMKCIHELNRL
N---------------ELHK
QQLNILRENLSFLNLP----
-----------PLVVEMFQL
STLPLPVNHNNQEN------
--------------------
-----------QYTPAPEHQ
SPQPQQPTPNQQQTPVHC--
------------------
