>TS_TRISPI_Contig2.b.EN.1342_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
MSAADNTKEHDVPSDK----
----DNVENGKLT--SKHDD
P-------------------
-----------TTP------
---MEQDAAA------IDNC
EEPLLRSNPKRFVLLPLEYP
DIWAMYKKAEASFWTVEEVD
LRKDANDWAKLNKDEKHFIS
HVLAFFAASDGIVFENLVER
FSQEIQVTEARFFYGFQIAI
ENVHSEMYSLLIDTYIRDPV
ERDFLFNAIETIPCVKKKAD
WALRWIGDRQSPFCERLVAF
AAVEGIFFSGSFASIFWLKK
RGLMPGLTFSNELISRDEGL
HCDFACLLYSHLKKKPTEDR
VRQIITEAVSIEQ-------
--------------------
-EFLTDALPVRLIGMNCVLM
SQYIEYVADRLLVELGCSKV
YNSENPFDFMEMISLEGKTN
FFEKRVGEYQKAGVMADR--
-SQQVFTLDAEF
>Minc10347_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--MAYIPRLMVSSNDK----
---ELPVDKQSHS-------
--------------------
-----------DDS------
-------------------A
NEPLLRENPNRFVIFPIKYQ
DIWQFYKKAVASFWT-----
VEEDITDWNKLNDQERFFIS
RVLAFFAASDGIVNENLVER
FAQEVQIPEARCFYGFQIAI
ENIHSEMYSKLIDTYIKDPI
ERSKLFNAIFEFDFIKKKAD
WALRWTASKEASFGERLIAF
AAVEGIFFSGSFAAIFWLKK
RGYMPGLTQSNELISRDEGL
HRDFACLLFQHLNNKPNNER
IEEIIREAVDIEK-------
--------------------
-EYLTDALPVDLIGMNCQLM
SQYIEYVADHLL-------I
YKARNPFDFMENISIEGKTN
FFEKKVSEYQKAGVISTD--
-DEREFRLDAQF
>Mh10g200708_Contig1556_17112..18869_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
MIEDENYQKENQLVETN---
--GSNPKKPRLMTSNDKELS
--------------------
--------------------
---ADKPSHS------DDLA
EEPLLRENPNRFVIFPIKYH
DIWQFYKKAVASFWTVEEVD
LGKDIPDWNKLTDQERFFIS
RVLAFFAASDGIVNENLVER
FAQEVQIPEARCFYGFQIAI
ENIHSEMYSKLIDTYIKDST
ERARLFNAIFEFDFIKKKAD
WALRWTASKEASFGERLIAF
ASVEGIFFSGSFAAIFWLKK
RGLMPGLTQSNELISRDEGL
HRDFACLLFQHLNNKPSIER
IEEIIKEAVDIEK-------
--------------------
-EYLTDALPVDLIGINCKLM
SQYIEYIADHLLVELKLNKV
YKARNPFDFMENISIEGKTN
FFEKKVSEYQKAGVISTD--
-YEREFRLDAQF
>Minc16193_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
MIEDGNYQKENQFDETN---
---GSNTKRPRLMVFNDKEL
P-------------------
--------------------
---VDKQSHS------DDSA
NEPLLRENPNRFVIFPIKYQ
DIWQFYKKAVASFWTVEE--
---DITDWNKLNDQERFFIS
RVLAFFAASDGIVNENLVER
FAQEVQIPEARCFYGFQIAI
ENIHSEIS------------
---KLFNAIFEFDFIKKKAD
WALRWTASKEASFGERLIAF
AAVEGIFFSGSFAAIFWLKK
RGFMPGLTQSNELISRDEGL
HRDFACLLFQHLNNKPNNER
IEEIIREAVDIEK-------
--------------------
-EYLTDALPVDLIGMNCQLM
SQYIEYVADHLL-------I
YKARNPFDFMENISIEGKTN
FFEKKVSEYQKAGVISTD--
-DERQFRLDAQF
>Sjc_0071060_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
MTSDSNKENELYKYIK----
-EHTPGIIEKDVS-------
--------------------
--------------------
--YGKQFSVS-----KDEIE
LEPLLKPNPHRFVLFPIEYH
DIWHFYKKAVASFWTVEEVD
LSKDFTHWESLKVGERHFIS
YVLAFFAASDGIVLENLLER
FSQEVQIPEVRCFYGMQIAI
ENIHSEMYSLLIDTYIKDSK
ERDFLFNAISNLTCVAKKAQ
WALDWIGDSKSTFAERLVAF
AAVEGVFFSGSFAAIFWLKK
RGLMPGLSFSNELISRDEGL
HCDFACLLFKHIIKKPSRVR
VESIMKEAVLIEQ-------
--------------------
-EFLSEALPVSLIGMNCKLM
CQYIEFIADRLLVELGYEKI
YHSDNPFDFMENISIEGKTN
FFEKRVGEYQRAGVMSRARG
EPTHNFSIDEDF
>Smp_055890_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
MTSDSNKENELSKYIK----
-EFTPGIVEKEVS-------
--------------------
--------------------
--YGKQFSVT-----KSEIE
LEPLLKPNPHRFVLFPIEYH
DVWHFYKKAVASFWTVEEVD
LSKDFIHWESLKVGERHFIS
YVLAFFAASDGIVLENLLER
FSQEVQIPEVRCFYGMQIAI
ENIHSEMYSLLIDTYIKDSK
ERDFLFNAISNLTCVAKKAQ
WALDWIGDSKSTFAERLVAF
AAVEGVFFSGSFAAIFWLKK
RGLMPGLSFSNELISRDEGL
HCDFACLLFKHIIKKPPKER
VESIIREAVLIEQ-------
--------------------
-EFLSEALPVSLIGMNCKLM
CQYIEFIADRLLVELGYEKM
YHSDNPFDFMENISIEGKTN
FFEKRVGEYQRAGVMSRARG
ESTHNFSVDEDF
>C03C10.3_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
MTLTEIQNVEKENAGAS---
---VPKHSSNKLKLEKELEK
LEIVDQTKAASAEETNNE--
--------------------
---SEVNELD---------A
DEPMLQDLDNRFVIFPLKHH
DIWNFYKKAVASFWTVEEVD
LGKDMNDWEKMNGDEQYFIS
RILAFFAASDGIVNENLCER
FSNEVQVSEARFFYGFQIAI
ENIHSEMYSKLIETYIRDET
ERNTLFNAVDEFEFIKKKAD
WALRWISDKKASFAERLIAF
AAVEGIFFSGSFASIFWLKK
RGLMPGLTHSNELISRDEGL
HRDFACLLYSKLQKKLTQQR
IYDIIKDAVAIEQ-------
--------------------
-EFLTEALPVDMIGMNCRLM
SQYIEFVADHLLVELGCDKL
YKSKNPFDFMENISIDGKTN
FFEKRVSEYQRPGVMVNE--
-AERQFDLEADF
>14961.m05340_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-----MPLEEVNVNCS----
-DLLSVKENLTIQKTEPPCG
T-------------------
--------------------
---YETATTT----VRYESN
GEILLAENPNRFVIFPIKFH
DIWDFYKKALASFWTVDEVD
LSKDYRDWENLNDGERHFIS
RVLAFFAASDGIVNENLVNR
FSQEVQVPEARFFYGFQIMI
ENIHSEMYSKMIDTYIRDQK
QKKFRKFCVT----------
-----------------LCF
LEIN----------------
--------LSN---------
-----------------YKK
FTSMFNACIDAKQ-------
--------------------
-EYLTEALPVDLIGINCKLM
CQYIEYVADHLLTELHCAKI
YHSDNPFDFMERISIEAKTN
FFEKRVSEYQKAGVLSSE--
-EGKSFNLDSDF
