>14538.m00483_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MARIATIRNQIG
--------------------
-----------EISSDEALQ
NDL-----------KILPSN
YNFEIPKTIWKIRATKSKNV
CLQFPEGLLLYSCVIADILR
K-------------------
-------YTECEIVIMGDVT
YGACCVGDQAARAFGCDLMV
HYGHSCLIPIQ-ETQGIEML
YIFVNIEMNVGHFIDVLEAN
FEK---HKKLALVSTIQFVP
CLQSVKKELIG--KGYNILI
PQ---------------VKP
LSP---------GEILGCTS
PKLEEDVD-----AVIYLGD
GRFHLESVMIQNPSVVAY--
----QYDPYSN---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------WVQVACPRLSID
WGAQFKKPLLTPYELVTVLQ
----YVSFRTDSYPMDYYAN
ESLGPWTNNHKTHRECRPKR
--------------------
-----------------NHI
TISLQS--------------
--------------------
--------------------
--------------------
----------
>13648.m00018_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MARIATIRNQIG
--------------------
-----------EISSDEALQ
NDL-----------KILPSN
YNFEIPKTIWKIRATKSKNV
CLQFPEGLLLYSCVIADILR
K-------------------
-------YTECEIVIMGDVT
YGACCVGDQAARAFGCDLMV
HYGHSCLIPIQ-ETQGIEML
YIFVNIEMNVGHFIDVLEAN
FEK---HKKLALVSTIQFVP
CLQ-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
>C14B1.5_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MATRATQIS
--------------------
-------TLVEEIANNPNLK
EDL-----------KILPSN
YTFEVPKTIWKIRSTESKYV
ALQFPEGLIMYACVIADILE
K-------------------
-------YTGCDTVIMGDVT
YGACCVDDYTAKSMGCDLLV
HYGHSCLVPIQN-TDGIAML
YVFVNIHINLSHLIDCVKEN
FQG----KRLVVVSTVQFIP
SLQTLRTTFNKDDSSIRIDI
PQ---------------CKP
LSP---------GEVLGCTS
PRLDASKYD----AIVYLGD
GRFHLESIMIHNPEIEAF--
----QYDPYSRKLTREFYDH
DLMRKNRIGSIEIARKCTTF
GLIQGTLGRQGNLKVVEELE
AQLERKGKKFLRVLLSEIFP
EKLAMFPEVDC---------
--------------------
--------------------
--------------------
--------------------
--------WVQVACPRLSID
WGTQFPKPLLYPFELAVALD
----NISVPSDHWPMDYYSN
DSLGPWTNNNEANRPKREKR
--------------------
--------------------
-----------------KPH
IVVRTEAS------------
--------------------
--------------------
----------
>Mh10g200708_Contig1095_33280..35960_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MSSSLLAARGKQR
--------------------
-------QEIEEIAQNPNLL
KDL-----------QILPQN
YSFEIPKTIWKIKSTKSKTV
ALQLPEGLTMFACLIADILE
K-------------------
------YTENVEFIILGDVT
YGACCVDDFTARALGCDLLV
HYAHSCLVPIQ-HTIGIHLL
YVFVNIDIQITHFYDTIKQH
FNSNKNLLKIALVSTIQFVS
SLQAAKRQLEK--DGFQIII
PQ---------------ANP
LSP---------GELLGCTS
PKLSDDVS-----AIIYLGD
GRFHLESIMIHNPKIPAY--
----QYNPYSHEFTVEKYGF
EMLISNRQKAIEIAKKSKRI
GLILGTLGRQGNIKIFEYIE
QQLINNGKQPIKILLSEIFG
MTLDKFNSIDC---------
--------------------
--------------------
--------------------
--------------------
--------FVQIACPRLSID
WGHLFKLPLLTPFEISTAIL
----SNKLTN-EYPMDYYAN
ESKGPWTNNHESYRQNNRKK
--------------------
--------------------
-------------------K
IEHISLN-------------
--------------------
--------------------
----------
>Minc00810_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
-----MLWFCTFRRFLGFVT
WPTLSFLNGFATCLVTVWIE
TKQRRALLLPYLLNLVCHGL
LPEEEIGCWKRFKRAIKIST
RNFIASFTLLNIYKLFNKQQ
NTLKFPLFLASMPLLFEFFT
SITRPINFLKQKQFLFIALS
SFLSMAIFWQNNTLALYTFW
KMIELIYYKLICSNNLPIIP
GGDVLLFCTLSSYLLGLAVL
GPHLLRRNYYKFLCSATGNK
LQLFNRPLIEAFFGFNSAKL
YKNFWPKLEPKLLTINPAFY
CLKMSSSLLATR--------
---SKQRQEIEEISQNPNLI
KDL-----------KILPQN
YSFEIPKTIWKIKSTQSKTV
ALQMPEGLTMFACLIADILE
K-------------------
------YTQNVEFIILGDVT
YGACCVDDYTARALGCDLLV
HYAHSCLVPIQ-HTIGIHLL
YVFVNIDIQITHFYDTIKQN
FNSNKNSLKIALVSTIQFIA
SLQDG----------FQIII
PQ---------------ANP
LSP---------GELLGCTS
PKLPDDVS-----AIIYLGD
GRFHLESIMIHNPKIPAY--
----QYNPYSHEFTIEKYGF
EMLLSNRQKAIEIARKSERI
GLILGTLGRQGNIKIFEYIE
QQLINSGKQPIKILLSEIFG
SILDKFNSIDC---------
--------------------
--------------------
--------------------
--------------------
--------WVQIACPRLSID
WGHTFKLPLLTPFEMSTAIL
S--NNNLIKLNDYPMDYYAN
ESRGPWTNNHENYRQNRKKK
--------------------
--------------------
-----------------IEH
ISLIKLNH------------
--------------------
--------------------
----------
>Smp_030930.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MPSKRILP-
--------------------
------WKIPDWLLDDPLLN
KSIS----------EYLPVH
YNFEIHKTIWRIHCLRARRI
ALQMPEGLLLFAIPISEIIR
NYFIRCGETSGPALSISTNS
STVAEDSIKDIDVVILGDVT
YGACCVEELTAKALGVDLLV
HYGHSCLIPLD----SISVL
YVFVDIQIDIVHLIDSVKAN
FEK---SSRLALVSTIQFVT
SLQTAKQPLLE--AGYLVTI
PQ---------------CLP
LSP---------GEILGCTS
PKVEGVDA------LIYVGD
GRFHLESIMISNPLLAAY--
----RYDPYDKSFTREYYDH
KEMRKHRKKAVDTARNAVNF
GIILGTLGKQGSPAVVKQLQ
IELEKSGKTYIVLLLSEIIP
SKLALFDEQVD---------
--------------------
--------------------
--------------------
--------------------
-------AWIQVACPRLSID
WGVEFTKPLLTPYEAFVALN
EQVFWPRDLSEAYPMDYYAN
QSLGHWTPNHRLNKLSAPKP
VN------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
>Sjc_0054660_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MHEIVPTNNC
ILVSDIWVQPSKYKLQPLKQ
IDVTINLLSMPTKR------
---IIPWKIPDWLLEDSLLN
KSIS----------ECLPVH
YNFEIHKTIWRIYCLRAKNI
ALQMPEGLLLFAIPISEIIR
NYFLRTDKLSRSTLPITTNG
TTVAENNIRDIDFVILGDVT
YGACCIEELTAKALNVDLIV
HYGHSCLIPID----TISVL
YVFVDIQIDIVHFIESIKVN
FEK---SSRLALVSTIQFVT
SLQAAKQPLLE--AGYSVTI
PQ---------------CLP
LSP---------GEILGCTS
PKVEGVDA------LVYLGD
GRFHLESIMISNPLLAAY--
----RYDPYDKSFTREFYDH
KEMRKRRKEAIDMAKNAANF
GIILGTLGKQGSPAVVKQLQ
IELEKSGKSYIILLLSEIIP
SKLALFDEQVD---------
--------------------
--------------------
--------------------
--------------------
-------VWIQVACPRLSID
WGIEFTKPLLTPYEACVALN
EQVFWPKDLFEAYPMDYYAN
QSLGHWTPNHKSNKISTSRT
VI------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
>TS_TRISPI_Contig0.j.SNAP.135_T_spiralis.071204.pep_
MIIYLHAHSLALRLAACHTI
DLAVICAGHVWKKTIVNKDH
FTLKSMKKIHSKNNNRLMRS
RLDKNRFMTMWFVVCMVCMV
GFCVVNIIHSLQMLIHRHDF
DIHMPFTLLITVLVEFIVKS
IGMIFLDFGLTYSRSTIPIR
TLFILSPAFAVLTIAALRYL
GYSYLVLWLDPVLTICTCFI
LSVLSILSAADYISVLLMAV
PKEVKLENFESKFKLRFPGE
KFHQLHVWADTKNHFNLSVH
MRFKKSENYLQNFQSIKSFF
SEHGITMAVLQPEFEKATTD
SGNECLFEKKSEIIETKEVL
RQQLFKGLHEQQLSTTQKIY
IYTFISDTPISYSHNKQSFF
MRRSIVRGIPVEILEDERLN
AAVNMVRKVLQNKSSILPSN
YDFEIHKTIWKIRREKIKRV
YLQFPEGLLLFSCLIADILE
E-------------------
-------FGPCETVISCDVV
YGACCVDDYAAKAFDCDLLV
HYGHSCLIPVQ-DTTGCSVL
YVFVSIKFDTGHFIDTVRHN
FNP---NSRLALVSTVQFIS
SLQAARKALS---NDFKIEL
PQ---------------VAP
LSP---------GEVLGCTA
PRFNENMD-----AVIFVGD
GRFHLESVMIANPDVPAFNF
ISCEKYDPYGKKCFREHYDH
KTMQKQRRLSVEMASNCKKF
GLICGALGRQGNIRIMETVR
DQLLASCREVFEFVMSEISL
EKLSS---------------
--------------------
--------------------
--------------------
--------------------
--------WVQIACPRLSID
WGLQFIKPVITPYELMVAMD
G-----IKWQKQYPMDYYAF
ESLGPWTNNFGRRTKQRVKM
RCTK----------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
