>Sjc_0213900_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------SLGFTPKKRCRR
IRGKCKAFPRDRRSLPPHLT
AFMGYKAGMTHIVREVDRPG
SKVHKREVVEPVTIMECPPM
VIVG--MVGYAPTAKGLRTF
KTVWAEHLTEECRRRFYKDW
CKSKKKAFTKASRKWADEAG
LALINRDLKKIKKYCTVVRA
IAHTQMRLMKHRQKKAHIME
IQVNGGTISQKVDWIRQHFE
KQIPVSNVFSQDEMIDVIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPARV
ARSVARAGQKGYFHRTELNK
KIYRIGMGLQAQLEVAKAEA
AKDDR--DKNVLPKPKGNAS
TEFDLTAKNITPIGGFPHYG
EVRNDYVMIKGCCMGPRKRV
ITLRKTLIPQIKPRSKEKIV
LKFIDTSSKFGHGRFQTRAE
KQAIMGPLKKSLGRPRVVA-
-----
>Smp_047200_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------SLGFTPKKRCRR
IRGKCKAFPRDRRSLPPHLT
AFMGYKAGMTHIVREVDRPG
SKVHKREVVEPVTIMECPPM
VIVG--MVGYAPTAKGLRTF
KTVWAEHLTEEFKRRFYKDW
CKSKKRAFLKSSKKWLCEAG
LAQIKRDLKKIKKYCTVVRA
IAHTQMRLMKHRQKKSHIME
VQVNGGTVSQKVDWIRQHFE
KQISVSNVFSQDEMIDVIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPARV
ARSVARAGQKGYFHRTELNK
KIYKIGMGLQAQLEVAKAEA
SKDDK--DKNAVPKPKGNAS
TEFDLTAKNITPMGGFPHYG
EVRNDYVMIKGCCMGPRKRV
ITLRKTLIPQVKPRSREKIV
LKFIDTSSKFGHGRFQTRAE
KQATMGPLKKSLGRAKVAA-
-----
>Minc16487a_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------SMGFTPKKRSKR
HVGKCKAFPKDDPSKPIHLT
AFIGYKAGMTHIVRDVDKIG
SKVHKKEVVEAVTIIETPPM
VIVG--VVGYIETPRGPRPL
KAVFAEHLSEDCKRRFYKNW
YKCKKKAFTKYAKKWQDEDG
QKSIEADLNKIKKYCAYVRV
IAHTQMKLMKHRNKKAHIME
IQINGGTVSEKVDWAREHFE
KQIPVDQVFEQDEMIGCIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPSRV
QFTVARAGQKGYHHRTEINK
KIYRIGKSCLTP--------
-------EGKKN------GS
TDFDTTEKTINPMGGFPHYG
LVNQDFVMIRGCCVGPKKRP
ITLRKSLITQTKRFAFEKID
LKWIDTSSKFGHGRFQTSAE
KKAFMGKLKKDFLAETTVS-
-----
>Minc17314_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------SMGFTPKKRSKR
HVGKCKAFPKDDPSKPIHLT
AFIGYKAGMTHIVRDVDKIG
SKVHKKEVVEAVTIIETPPM
VIVG--VVGYIETPRGPRPL
KAVFAEHLSEDCKRRFYKNW
YKCKKKAFTKYAKKWQDEDG
QKSIEADLNKIKKYCAYVRV
IAHTQMKLMKHRNKKAHIME
IQINGGTVSEKVDWAREHFE
KQIPVDQVFEQDEMIGCIGV
TKGKGFKG------------
--------VACIGAWHPSRV
QFTVARAGQKGYHHRTEINK
KIYRIGKSCLTP--------
-------EGKKN------GS
TDFDTTEKTINPMGGFPHYG
LVNQDFVMIRGCCVGPKKRP
ITLRKSLITQTKRFAFEKID
LKWIDTSSKFGHGRFQTSAE
KKAFMGKLKKDFLAETTVS-
-----
>Mh10g200708_Contig1000_47259..48660_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------SMGFTPKKRSKR
HLGKCKAFPKDDPSKPIHLT
AFIGYKAGMTHIVRDVDKIG
SKVHKKEVVEAVTILETPPM
VIVG--VVGYIETPRGPRPL
KAVFAEHLSEDCKRRFYKNW
YKCKKKAFTKYAKKWQDEDG
QKSIEADLNRIKKYCAYVRV
IAHTQMKLMKHRNKKANIME
IQINGGTVPEKVDWAREHFE
KQIPVEQVFEQDEMIGCIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPSRV
QFTVARAGQKGYHHRTEINK
KIYRIGKSCLTP--------
-------EGKKN------GS
TDYDTTEKTINPMGGFPHYG
LVNQDFVMIRGCCIGPKKRP
ITLRKSLITQTKRFAFEKID
LKWIDTSSKFGHGRFQTSAE
KKAFMGKLKKDFLAETTVS-
-----
>14039.m00115_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
---MLNEARLVVWMVWLGWV
AVGKWSLVVLHKLVGLAMSH
RK---------FSAPRHG--
--------------------
--------SMGFTPKKRSKR
HRGKVKAFPKDDPSKPIHLT
AFMGFKAGMTHIVREVDKPG
SKVNKKEVVEAVTVLETPPM
IIVG--VVGYIDTPRGPRQF
KTVWAEHLSEDCRRRFYKNW
NSSKKKAFQKHAKKWQDEDG
MKSIQADLAKMKKYCSIIRV
IAHTQMKVMKHREKKAHIME
IQVNGGTVPEKVDWAYEHFE
KQVPVDSVFAQDEMIDTIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPSRV
QFTVARAGQKGYHHRTEVNK
KIYRIAKSCLTE--------
-------EGRRN------GG
TDYDITEKSINPMGGFPHYG
LVNQDFVLIRGCCMGSKKRP
ITLRKSLITQTKRFAYEKIN
LKWIDTSSKFGHGRFQTHAE
KKAFMGKLKKDFVAA-----
-----
>F13B10.2a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-----------------MSH
RK---------FSAPRHG--
--------------------
--------HMGFTPKKRSRT
YRGRIKAFPKDDKSKPIHLT
AFLGYKAGMTHIVRDVDKPG
SKVNKKEVVEAVTIVETPPM
VIAG--VTGYVDTPQGPRAL
TTIWAEHLSEEARRRFYSNW
AKSKKKAFTKYAKKWQDEDG
KKLIEADFAKLKKYCSSIRV
IAHTQMKILRRRQKKAHLVE
IQVNGGTIEQKVDWAREHLE
KQVQVDTVFAQDEMIDTIGV
TRGHGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPSRV
AFTVARAGQKGFHHRTIINN
KIYRIGKSALTE--------
-------EGKNN------GS
TEFDLTQKTITPMGGFPRYG
IVNQDYIMLRGAVLGPKKRL
ITLRKSLITQTKRVAHEKIN
LKWIDTSSKTGHGRFQTTAE
KRAFMGKLKRDFLAEAEAKA
-----
>TS_TRISPI_Contig11.b.SNAP.86_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
-MRHVHYSSKLTIFIICVSH
RK---------FSAPRHG--
--------------------
--------HVGFLPKKRSKR
HRGKVKSFPKDDPQKPVHLT
AFIGYKAGMTHIVREVDKPG
SKINKKDVVEAVTVLETPPM
VIVGKCVVGYIETPQGLRAF
KTIWAEHLSDDCKRR-----
YKCERKAFTKASKKWQDEAG
VKEIQTDFARMIKYCKVIRV
IAHTQMKLLHHGQKKAHIME
IQLNGGTIEEKVNWAREHLE
KQVPVDSVFARDEMIDCIGV
TKGKGFKGVTSRWHTKKLPR
KTHKGLRKVACIGAWHPSRV
RYTVARAGQKGYHHRTEINK
KIYRIGKGADKK--------
-----------------NGS
TEYDLTEKTINPMGGFPHYG
MVNQDYVLIKGCCMGPKKRV
ITLRKSLLTHTKRSALEKIE
LKFIDTSSKFGHGRFQTHAE
KKAFMGLLKKDLIKE-----
-----
