>TS_TRISPI_Contig7.b.SNAP.47_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MMLDAAR
EKVVEWASRKNKQLVFQMTE
GRRTQVVLLDDRRLEIVVQT
RLTVAELMNIVASHCHLKDP
DRQYFGLAFQDDKQQLFWLH
D-------DRRVLDHEFPKK
LAPSSAVLTLHHLVKFYVDS
FMRFANAASVELLFLQVRNQ
IYRNVINADHDTIFQLGALL
VQAYYGDFRNENATRNAIKK
LPKA--------------CS
DTTILLWNGN---------V
EHCFSCVQLNNTQRCFSEDQ
DKVGSPFVLGFSSRGIFQFN
SNDKSS--------ALRKCT
IRDVAYTYSVSS--------
--------------------
--------------------
-------VVHVLSSFNP---
-------------------L
EDAFQSSTVPGDNLIAAIGD
PTTQYGFAKSTNVRTEQRAR
ACLLMRIAAVV---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------
>14954.m01663_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MGRFQRLSMHD
GKRSIIYLLDGQQLELTIQP
RLFVHELLNIIASHVALKDA
DKKYFGLAYVDHLEQYHWLP
T-------DRRVLEYEIPRK
SHQLHAVLELHHSVKFFVDS
VLTLCHPSAIELYFLETAKR
LVKGLLEFTDLEYYKIASSF
LQIYCGNYVSDEKARCSLTE
LIPIPNGILHAYHISLEDVE
KNVIEMYKDLTGVPKGVAIL
NFLQTAERSSTHGCHFYQVR
DKAGQPWTVGISNKGIFQYD
PADISKPKKIFNWSLLDNLY
YRDRKFSIEVRNTRVIQSSG
SANSILDSTGYLDSDDELAK
AVRDPTTHLHKRTHTIPFRI
ALYRTLQWMVLIQRDFAGPQ
STTFTHTRKQARIVSNDPGV
ELKQLGEKLCRLISHSSVAS
SLPSLNSLSSNGMPSAKVSD
GSLVSLSSLNDIQNREKTEE
EKQKEVEMYRRLKKRKNELE
EKLLAKLDELRELCIKEAEI
TGELPKEIYKTLMPGEEEPK
VKRRVGTSFSLSEEVFKRPN
DR--ISMLEADVELHRKIVA
AAERLAKDKTT-NKSVRKKR
QKDLIAATQKLRGLEFGLTQ
-LRLSASKPDVSSSVRNIPG
SKGPWRNCSD----YQIEST
SLGTRNDSNS-------LIT
KSCPATPRGS----FPDLLN
SAENERREASDDNNNNNNNG
DDDGKR-------------R
ASMECVQRYPSTSTCSSIHS
AHISNNTSSFTGVSESGLSF
GNSPFDSRTSKR--------
-----------------IPP
PLHRTCYFLPEREISWEKLK
NK-------NTENHHIPIYE
NVGYKSCVSYKSSYREMNFP
TLNDHSDCKGRFERAFLDHD
LPEQESFAKSDDKYESRINY
SVIGCSGSSKNIANYGTALK
QP----------SWKDYFAQ
ENNRDLCIVGVGKNNNTSQQ
AMIQQQQQNDETPSSSYLRR
KLVNSSLETYQNSGCSSPPV
AGLLLNDGKTPLRYAVLPTS
RSYNDGFTTASLDRRAMKER
QSSCSSMGYQQLRSAQL--A
VTDMVREVCIGQPVTRRTPL
STPRFTTTFPVSGPSIENSK
PVLSADTHHYQQRSPLQQCN
TLEHSMTSLRNVAQIIGSSS
ILRPPPPAYPVAIRNGIIGV
RNPLGKVTTAPTELRMDTLK
NYYKDKTNGIKKNATAV
>F07C6.4b_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MHME
QDVNAALRPAYRHRYLQKGH
HHSRNAVVDHQELTEKLNR-
--------------------
--------------------
--LTSTSSLGSSLPSLS---
--------------------
--SLHSNSSIGTMPSAKIGD
GSTSSLPMSSAKPMSTQTSE
PQLPDVPEPNESLHNKTIDE
FQ-KDQEKCDRLKARKAELE
MRLRQKMQELKDVCVEEGDI
TGEMPVEINDVVLPGDDFPR
LKRRVGTAYSIPD-ELIKAD
KADKMSQLETDVELHRRIVA
AASRLATDKNT-NKSVRKKR
QKDLQAARLRLNRLEQGLQQ
-MRHSASKPDISSLTSDSSN
SWTASNSSGP----------
---MLTMAMT----------
KSCPTTPRGS----VPDLRN
GLDDEKDEFDENVEDRVSRR
APSAIS--------------
---RHSLSQRYSGVSS----
------SSTSSGSDSMGLGL
PPRPTSRKSQQ---------
--------------------
---------QQTTPFDDQLD
N---------PMICEIPPPP
SSAAAHPLYENVGYRSTSYR
SSYRQA---------HYPTI
QDEHTQRKRAQSAHS-----
-ISTDNGATGRTSTYSVPLN
--------------------
--------------------
-------------------D
AAQKFREYDYDD--------
------------EEDSTPTM
DLPSHLINVRRLTSSISCQA
GFATASLDRRYSKLNGG--R
LSSGG----GGSDDVVRQNV
TTRITTFPVATSAATVILSG
KPYSASELPRFQPPPPVARV
THMPRGSLPPYSSATMGAQS
PAPPPNGKLPTNPQMEALLS
YYKQQQQQQHQQQSRSAP--
--SQQPKTATIV-----
>Mh10g200708_Contig1479_3607..6646_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MAS
PLIQNIGVMQRVVTNNDDE-
-------ASEINIGNEVHSE
EMRRKFEISNALRIQAELLE
ETLIKRLEELKRICIEEAEL
TGQLPKEIYKTLLPGEPEPI
IKRRVGTAFKFPNKLLNDNN
QIDELGRLETEIVLNKRIVA
AAERLATDWSA-NKGLRKKR
RRDLQTATIKLRTLEKDLNR
RIRLSNSKPDISTPPQEEIQ
GMRRKNAGSG------FSLN
SLKNWPNFYN-TIKWGNSST
KSCPSTPHGSILDLAEIVPN
ISPQKQNRKESKKS---RKT
PTNAKY-------------L
HNMIKKEEKQQKLLNSQQIP
KQKENNCLNCSPPTKLPLSF
SASTSSSSTSS---------
--------------------
-YSSSLSLNGPTPSIKGQKT
N------------GTVSATI
SSSSGISASMNASLASASST
NLITPP-------PIPCRRS
LTGNNKNTSPSLQNK-----
ETSNFYIKTEQIFNKEEQTN
--------------------
---------KSTHLYANIGY
TTSAPYKSAYRQSNFPTLQN
TQKSLSPTNYCS--------
--------HNNYYSVPSTSI
FDNQEFPLSSSKQRFTLINS
SISSSALPRFHKISPQQSLL
IPSYYSSSSLDRRALKGKNN
WKNNKEFEINKQPLRLQQKP
PPFYNCHSNEIFRGQFSLQR
KNAATTFPVDTKLNPFESTD
SSNSQQNHFNLNQMLEKDES
MENLLALIHNTTINN-----
-----------------
>TS_TRISPI_Contig7.b.SNAP.46_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MHTDTSNNSTS
DLGSSVSSQSLRSLPNMCYA
EQARDSEFYKQLQSRKQALE
LLLIEKLKELKDVCIQEGNI
TGEIPSELYSALAPGEAEPK
IKRRVGTSFSISPDLVNKLV
TIDHISKLEADVEIKRKIVA
GHEKLVNDPSV-SSVVRRRR
RQDLKQAIQQLKQLENQLEQ
-LCLTATKYNMHCINYSHSP
YKSDKTNSVIRGQPSPFACN
SLGRLQSCRN-------AAS
GMASSSRLSPLRGRDALPYY
AQAPSTSASNSRLR---SAS
IPNSPNLG-----------L
RCAEDSVPCSSGLLELNMRQ
S-----SSSSSAVGYRPFVS
YQSKYRQQNYP---------
------------------TL
LDRPNVSVGCSRSLSSQSLQ
N---------DERDVLSPLR
FFPKVDAVDHALGSYNVPQQ
RTSWDQDCLERMNHAVLGSS
ESVNSGLTHRSISSSAGAKA
AIPGCSGQFPGMVNYVGSLD
--------------------
--------------RRQLKN
RGTGATGLLKRLSEKYTVIG
RQQQQQQQQQQQ--------
----------QQYQESYASM
DHSPPRYPSRGSSAMVACQP
ALEAVRPYSNDDYLKYT---
------NRQPAVAPARRVQH
EVNLPPTFSSPQHSAMVHQR
TGPKAMIAHDVQDVLSWYDE
SKPLGVARTNASCSDVCISA
SAGTVTNAKAANKSNGASST
GSPLKAATVK----------
-----------------
