>Smp_073500.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MQIATHLRS
ICTPSFNKVASSLICPLQN-
------------IRFYAVPG
VKTAYVRDKPHMNIGTIGHV
DHGKTTLTAAITKILSGKNN
SVYRSYEEIDAAPEERKRGI
TINAAVVDYSTSNRHYAHTD
CPGHADYIK-----NMITGA
NQMECAILVVAATDGTMPQT
REHLLLAKQIGI--ERLVVF
INKADAA-DPEMLELVELEI
RDTLKHYGFDGDNTPIISGS
ALCALE------------NR
EPKLGIEKIEELLDAIDS-V
PLPKREKDKP----------
FLLPIEHVFTIT-GRGTVVT
GRIERGILKLQSPIEIIG--
-YSQTLKSTVTGIEMFHQLL
DQAEPGDQVGILMRGVKRDE
VRRGQFVVEPKS-MSIHDYV
QC-------------QVYML
SKKEGGRS-KPFTDNHQFHV
FSKSWDCPAILILPEG-REM
VMPGEDAAVNLHFHRKMALE
VGQRFTIRAD--SSTIGYGV
VGKIL---------------
PGP---GPFNWSK-------
--------------------
------
>Sjc_0215290_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MPVVSHLRF
VYSLPLSRAVTSRTWPLQN-
------------IRSYVVPG
IKTAYVRDKPHMNIGTIGHV
DHGKTTLTAAITKVLAEKNS
SVYRSYEEIDAAPEERRRGI
TINAAVVDYTTSNRHYAHTD
CPGHADYIK-----NMITGA
NQMECAILVVAATDGTMPQT
REHLLLAKQIGI--EKLVVF
INKADAA-DPEMLELVELEV
RDTLKQYGFDGDNTSVVSGS
ALCALE------------NR
DHKLGKEKIEELLDVIDS-V
PLPKREKDKP----------
FLLPIEQVFSIT-GRGTVVT
GRIERGTLKLQSPVEIIG--
-YSQTLKSTVTGIEMFHQLL
DQAEPGDQVGVLLRGVKRDE
VRRGQFVVEPKS-ISMHDYV
QS-------------QVYML
SKKEGGRT-KPFTNNHQFHI
FSKSWDCSALLVLPEG-REM
IMPGEDAAVNLHFQKKMALE
VGQRFTIRCS--GTTLGYGV
IGKVL---------------
SGP---GPGNWSK-------
--------------------
------
>TS_TRISPI_Contig1270.EN.1005_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MAFRFLFSV
P--GSVRGTVRISFSQHQAK
HWISGKPL-VVNPCQHYAVS
VKAVYKRDKPHINVGTIGHV
DHGKTTLTSAITKILAEKKC
ATFKKYEEIDNAPEEMSRGI
TINVAHLEYETEKRHYGHVD
CPGHADYIK-----NMITGT
SQIDGAILVVAATEGVMPQT
REHLILAKQIGV--EQMIIF
LNKVDEA-DAEMVELVETEV
RELLGEFGYDADNTPVIAGS
ALCALQ------------DT
KPEIGRERVLSLLDAADTWF
KIPLRDLDKP----------
FLFPVEHVYSIK-GRGTVVT
GKLIRGKMKKGDAFELIG--
-FGSKVKGTVSGIETYHKTV
DVGEAGDQLGLLIKGVSKDD
VRRGIVIVPQNAGFKDCVRF
EA-------------KTYFL
KPEEGGQT-KPX--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------
>TS_TRISPI_Contig0.g.SNAP.266_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
----------MIYDVTYMYN
QKVSKREIISFEHDFFYAYQ
RSKSSVRGTVRISFSQHQAK
HWISGKPL-VVNPCQHYAVS
VKAVYKRDKPHINVGTIGHV
DHGKTTLTSAITKILAEKKC
ATFKKYEEIDNAPEEMSRGI
TINVAHLEYETEKRHYGHVD
CPGHADYIKVRRISNMITGT
SQIDGAILVVAATEGVMPQT
REHLILAKQIGV--EQMIIF
LNKVDEA-DAEMVELVETEV
RELLGEFGYDADNTPVIAGS
ALCALQVCTT--AGTVQSDT
KPEIGRERVLSLLDAADTWF
KIPLRDLDKP----------
FLFPVEHVYSIK-GRGTVVT
GKLIRGKMKKGDAFELIG--
-FGSKVKGTVSGIETYHKTV
DVGEAGDQLGLLIKGVSKDD
VRRGIVIVPQNAGFKDCVRF
EA-------------KTYFL
KPEEGGQT-KPLANFYSDVA
YSLTWNRPVILQIVD--KDL
VMPGEDANIIVNLGVPVYVE
PQQRFTLRSN--CQTVGTGV
VTKLLNEVPAEIVDKKLRKK
AMREEVEKLGFNPYSEDVGR
KAFV----------------
------
>Y71H2AM.23_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MQILNLLSR
N-VGVFKTVTLCEQKMQQVS
---------LMQARHLAVPG
GKAVFKRDKPHLNVGTIGHV
DHGKTTLTSAITKILATSKG
AKYRKYEDIDNAPEEKARGI
TINAFHLEYETAKRHYAHID
CPGHADYIK-----NMITGA
AQMEGAILVVAATDGPMPQT
REHLLLARQVGVPLDNIVVF
MNKVDEVPDAETRELVEMDI
REQLNEFGYPGDTCPVIFGS
ALCALE------------GK
QPEIGEEAVKQLLEVLDNKF
VIPERKVNEE----------
PMFAAEHVYSIV-GRGTVIT
GKLERGILKRGDKIEIVGGT
KDGTTVKSVISGLESFRKTV
DQAEPGDQLGVLLRGLGPKD
VRRGCVLLPQGHKHKVTDKV
KA-------------QLYVL
KESEGGAK-TPIANYFSEHV
FSLTWDSGASVRIIG--KDF
VMPGESAEVELSLNSQMFIE
PQQRFTIRKG--AKTIGTGV
FTDVLPPLTNDEKDPKSKKK
LMKAEMERLGFNPYGDMVEK
RLKPDFSNSPKDNPAAKAFE
GQP---
>15146.m00096_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MLVYSACHR
SMLASPKMVNAAGGFREN--
--FLTKLAQLKHARCLAVPG
AKQVYKRTKPHLNVGTIGHV
DHGKTTLSSAITKVLATKKG
AKYRKYDEIDNAPEEKARGI
TINAFHLEYETEKRHYAHID
CPGHADYIK-----NMITGT
AQMEGAILVVAATDGAMPQT
REHLLLARQVGIPLENIVVY
LNKIDEVPDKETHELVEMEM
RELLSELSYPSD-SPVVFGS
ALCALE------------GK
NPEIGEESIWKLLDVLDNSF
IIPERHQNTE----------
VMFPAEHVYAIK-GRGTVIT
GKLERGSLKRGDKVELVGG-
-GKEPVKSVVSSLETFKKSL
DVAEPGDQLGVLLRGVESKA
VRRGSVLLPQGHKHVPTDKV
EA-------------QLYIL
KPEEGGAK-TPVANYFTEHL
FSLTWDCGVIIKIKG--KDF
IMPGEVGEVELYMNTVQFIE
PQQRFTIRKD--PVTIGTGV
FTKLHPPRTEAEKDKKTMRM
AMKAEMERLGFNPYGEQMEK
RLKPDYSNSPKQDMSVSKLF
EESAQK
>Mh10g200708_Contig133_6114..8672_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MISA
R-----TSIFLASKR-----
------------FYATYIPG
SRPVFKRTKPHLNVGTIGHV
DH-----------VLATSKK
AKYTKYEDIDNAPEERSRGI
TINTAHLEY-----------
------------------GA
AQMEGAILVVAITDGPMPQT
REHLLLARQCGIPQNNICVY
LNKVDEVSDEETRELVEMEV
RELLNEYEYPGDDVPIIIGS
ALSALE------------GV
NPEIGEKSVFKLLETLDTYF
KIPKRDLSDE----------
TIFAIEKVYNIP-GKGDVVT
GKLEQGSIKKGDKMLIVG--
-NGKNKKTVVNGLETFCKTV
DKGEPGDQLGILLRDLQPKD
VKRGCVLLPQGHKHLITDRV
RA-------------QVYVL
RPEEGGSK-VPIANYFIEQI
FSLTWNCVGNIRILDKNKDF
IMPGEHAEVVLEYNHAQFML
PQQRFTIRNSE-NSTIACGV
FLELLEPLSFEEKDKKIRKV
QRRSVMEKLGFNPYDASWEK
TCKPDYSKSPNSNPAEELFR
REATGH
>14971.m02830_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MTVMYCQLE
R----FSVFRSSTFSLLFS-
------------GITRNATN
ASNTVKIVKENLNVGTIGHV
DHGKTTLTAAITKILSTRGK
TRFVKFEEIDKAKEEQRRGI
TINIAHIGYESDIRRYAHID
CPGHSDFIK-----NMICGA
TQMDVAILVIAATDGVMTQT
KEHLLLAKQVGV--SSIIVF
INKVDLV-DSDVVTLVEIES
RELLEHHGYTDESVVVLKGS
ALQALE------------GS
DG----ECIEKLISALDN-I
PLPMRLQDGP----------
FLMPISSRVSIT-GRGTVVV
GTVEQGKVRKGDKVEIKG--
-EDQCLHSVVSDIQVFKKSV
LEVFAGDHCGILCRGVKANI
VNRGMWLGAVDA-VTTSNFF
KI-------------ELYLL
SEKEGGRR-LAVHSGYTEKI
FCSTWDQAGRLHLES---DI
LMPGEHCTAYLVLLKRMPVK
QSLPFTIRESS-KKTIARGI
IREVFPPIN----------L
DSFKDIKDKGFENFIRQ---
--------------------
------
>C43E11.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MNPAALSAF
TRSLLFNRCSTSSFCN----
-----------SITRNAVAF
FATAAATPKINVNVGTIGHI
DHGKTTLTSAITRVQAKKGF
AKHIKFDEIDKGKEEKKRGI
TINVAHIGYESPLRRYSHTD
CPGHSDFIK-----NMICGT
SQMDVAVLVIAATDGVMEQT
KEHLILAKQVGV--KNMAIF
INKADLV-EEDDLDLVEMEA
RELLSLHGFNGDATPVIRGS
ALSALE--------------
--GQDISCIERLIDALDS-L
PEPDRNEKDT----------
FVMPIASKTAIT-GRGTVIV
GTLERGVLKKGDKVEIKG--
-DGQTLQTTASDIQVFGKSV
KEVRAGDHCGVLCRGVKGDT
VKRGMWAGHPGA-VTITNRV
KV-------------ELYLL
SEAENGRK-IGIRTGFTDKM
YCSTWDQVGRFDMSN---EL
LMPGEHTSATVLLMKDMPLR
KGMPFTLREGSSKTTIARGI
ISDLED--------------
--HVAVEKHNLKKSAEKM--
--------------------
------
>Minc03352_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MTRITLFSR
T-------LNYSSKYFYS--
--------------IARNIK
ATSQEKAPKLHLNVGTIGHV
DHGKTTLSSAITKYLSKNKM
AKFISYDDIDRAPQERARGI
TINIANLEYE---RHYAHID
CPGHSDYIK-----NMITGT
SQMDAAILVIAATDGVMPQT
KEHLMLAKQIGL--EEVIVF
INKADLV-DKDDLELVEMEA
RELLNDYSFNGETTKVINGS
ALQALQGEDHNCIDELLKGX
XXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXSEKIEGS
FLMPIANKIKIPNSKDSVLI
GTVERGQLKKGEQLEIRG--
-FEHFQKVTAGEIQVFKKTV
NQVRAGEQCGILCRNLIFDG
VHKGMWLGAPGT-VQTTNIV
KARRFFDVFMICLHIKLYML
NENENGRK-QGIRSGHTVLT
FCTTWDKGCRIFFDN---EL
LMPGEVTNGYLVFLREVPIR
KGCKITLRESR-RRVLGHGV
VVELYEQQ----------FL
DTWNRFDAEGFLKDLKPLDE
NKKRK---------------
------
>Minc18999_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--MDAAILVIAATDGVMPQT
KEHLMLAKQIGL--EEVIVF
INKADLV-DKDDLELVEMEA
RELLNDYSFNGETTKVINGS
ALQALQ--------------
--GEDHNCIDELLKALDS-L
KVPNRSEEGS----------
FLMPIANKIKIPNSKDSVLI
GTVERGQLKKGEHIEIRG--
-FEHFQKVTAGEIQVR----
----AGEQCGILCRNLIFDG
VHKGMWLGAPGT-VQTTNII
KL---------------YML
NENENGRK-QGIRSGHTVLT
FCTTWDKGCRIFFDN---EL
LMPGEVTNGYLVFLREVPIR
KGCKITLRESR-RRVLGHGI
VLELYEQQ----------FL
DTWNRFDAEGFLKDLKPLDE
NKKRK---------------
------
>Mh10g200708_Contig91_128670..130564_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MITGT
SQMDAAILVIAATDGVMPQT
KEHLMLAKQIGL--EEVIVF
INKADLV-DKDDLELVET--
--------LKGETAKVINGS
ALMALE--------------
--GQDHSCIDELLKALDS-L
KVPNRLEDGP----------
FLMPIANKLKIPNSKDCVLI
GTVDRGKLKKGEHIEIRG--
-FEHYQKVTVGEIQVFKKSV
NQVKAGEQCGLLCRNLISES
VNRGMWLGAPGT-VMTTNIV
KAS-----------VKLYML
NEHENGRK-QGIRSGLSCIT
FCSTWDKGCRVFFEN---EL
LMPGEFTTAHIIFLREVPIR
KGSNFTLRETR-KRVLGHGV
VVELYEDQ----------FI
DTWHRFDADGFLKGLKPLDE
NQKRK---------------
------
>TS_TRISPI_Contig8.a.EN.1129_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MYYLSQMSLKQVVKR
SFSPFVTKLFAADYFRIEY-
------------ELSNTLIY
RKFCTQAMKENFNIGTIGHI
DHGKTTLTAALTKVLSKTTN
TKFVPFDEIDKAPEEQQRGI
TISIAHVGYETKKRKYSHTD
CPGHKDFIK-----NMICGA
TQMDAAILVVDAAEGTMPQT
REHVMLAKQVGV--QRIVVF
INKAEMV-DADLLELVKLEV
CELLDEFGFDSSKAPVVVGS
ALMALD------------QV
DGDFGQRSVERLLEELDK-L
EAPKRDTNAS----------
LILPVSSSFVVT-GRGTVVV
GTIEKGILRKGDKVQLVG--
-AGKCLDTIVSDIQIFKRPV
KEVRAGDHVGVLCRHVHHSD
VERGMWMTTPNS-VPICNHF
EA-------------QAYFL
KPEESGITSCPIRTGFTQKI
MCTTWDQTGRLVLTNT--DM
VMPGDNFIMQCILQRPMPLQ
VGLHFTLMHG--CSTIVRGV
VTSLFNN------------L
PVYSLKDTKTLTKKVQ----
--------------------
------
