>C09G12.8b_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYIPTV----
--------------------
---FDNYSANVMVDGRPINL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFLVCFALNNPASFENVR
AKWYPEVSHHCPNTPIILVG
TKADLREDRDTVERLRERRL
QPVSQTQ-GYVMAKEIKAVK
YLECSALTQRGLKQVFDEAI
RAVLTPPQRAKKS-------
-------KCTVL--------
------------
>K03D3.10_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
LSYTTNAFPGEYILTV----
--------------------
---FDTYSTNVMVDGRPINL
SLWDTAGQDDYDQFRHLSFP
QT------------------
-DVFLVCFALNNPASFENVR
AKWYPEVSHHCPNTPIILVG
TKADLREDRDTIERLRERRL
QPVSHTQ-GYVMAKEIKAVK
YLECSALTQIGLKQVFDEAI
RTGLTPPQTPQTRA------
KK----SNCTVL--------
------------
>12480.m00116_BMA1.short_headers.longest_isoform.pep_
-------MENHCWQSLFSSF
KVLVDIIDDNGTIHQYKIKG
VLVSKSWHKSSFYD------
--------------------
--------------------
--------------------
-------------------D
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYIPTV----
--------------------
---FDNYSANVMVDGKPINL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFLICFSLVNPASFENVR
AKWYPEVSHHCPNAPIILVG
TKLDLREDNETVERLRDRHL
APISYLQ-GLSMSKEINAVK
YLECSALSQKGLKQVFDEAI
RAVLIPPPKPKRS-------
------RKCTIL--------
------------
>Minc09582_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYIPTV----
--------------------
---FDNYSANVMVDQRPINL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DCFILCFSLVNPASFENIR
AKWHSEVSHHSPHTPIILVG
TKLDLREDPKTVEKLRERRL
TPISTVQ-GHQMAKDIKAVK
YLECSALTQVGLKQVFDEAI
RAVLCPPPPKPKR-------
-------TCGVL--------
------------
>Minc11466_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYIPTV----
--------------------
---FDNYSANVMVDQRPINL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DCFILCFSLVNPASFENIR
AKWHSEVSHHSPHTPIILVG
TKLDLREDPKTVEKLRERRL
TPISTVQ-GHQMAKDIKAVK
YLECSALTQVGLKQVFDEAI
RAVLCPPPPKPKR-------
-------TCGVL--------
------------
>TS_TRISPI_Contig2.b.EN.1285_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYIPTV----
--------------------
---FDNYSANVMVDGKPINL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFLICFSLVNPASFENVR
AKWFPEVSHHCPNTPIILVG
TKLDLREEQDTIEKLRERRL
QPIVHQQ-GLAMAKEIGSVK
YVECSALTQKGVKNVFDEAI
RAVLYPVCRKHFERNCKKCE
NRSVRRRMCSIL--------
------------
>Smp_062300.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVVGDGAVGKTCLL
ISYTTNAFPGEYVPTV----
--------------------
---FDNYSANVMVDRKPVNL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFLMCFSLVSRTSFENVR
SKWYPEISAHVPNAPIILVG
TKRDLRDSPNGLKST----M
LPVTYSE-GCRMAKEIKAVK
YLECSALTQFGLKDVFDEAI
RAVLMPEGKKKKH-------
------SSCELI--------
------------
>Sjc_0209090_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MQAIKCVVIGDGAVGKTCLL
ISYTTNAFPGEYVPTV----
--------------------
---FDNYSANVMVGEKRVNL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFLVCFSLISPSSFDNVR
AKWYPEIRHFSPNTPIILVG
TKLDLRNSS----TSPKNNQ
PSISYEQ-GLIMAREIGAHK
YLECSALTQDGLKDVFDAAI
RAVLMPPARKKKH-------
------TLCELI--------
------------
>C35C5.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MSSP
SRQIKCVVVGDGTVGKTCML
ISYTTDSFPVQYVPTV----
--------------------
---FDNYSAQMSLDGNVVNL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFILCFSVVSPVSFDNVA
SKWIPEIRQHCPDAPVILVG
TKLDLRDEAEPMRALQAEGK
SPISKTQ-GMKMAQKIKAVK
YLECSALTQQGLTQVFEDAV
RSILHPKPQKKKK-------
-------SCNIM--------
------------
>14961.m05305_BMA1.short_headers.longest_isoform.pep_
MRGKRPRLMGRCAWRKDILY
GHHFWDVNSSSATTPYSAFL
RLLNIYRRYPFRFWIACFIR
K-------------------
--------------------
--------------------
-----RQQSGSNFISLMSAP
SRQIKCVVVGDGTVGKTCML
ISYTTDSFPVEYVPTV----
--------------------
---FDNFSAQMTVDGYPVNL
GLWDTAGQEDYDRLRPLSYP
QT------------------
-DVFVLCFSIVAPVSFDNVL
TKWIPEIRHNCPDAPILLIG
TKLDLRDDPETLRQLNADGK
QPVSKNQ-GQKVAKRIRAVK
YLECSALTQQGLKAVFEEAV
RAVIAPKPTSKNK-------
-------NCTVL--------
------------
