>Smp_177400_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------HSGVNQL
GGMFVNGRPLPDTTRQRIIE
LAHSGARPCDISRILQ----
----------VSNGCVSKIL
CRYYETGSIRPKAIGGSKPR
-----VATNAVVTKIDIYKR
ECPSIFAWEIRDRLLQEGVC
TPDNIP----------SVSL
DFYD----------------
--------------------
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--------------
>14972.m07262_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MK-----------------
--------------------
-------LIVDSGHTGVNQL
GGVFVNGRPLPDSTRQKIVD
LAHQGARPCDISRILQ----
----------VSNGCVSKIL
CRYYESGTIRPRAIGGSKPR
-----VATVSVCDKIESYKR
EQPSIFAWEIRDKLLHEKVC
SPDTIP-----S---AVVEA
IIVINYAKQN----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-NNLLDR-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---FILPFSKLD--------
--------------------
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--------------
>Smp_170750_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MTVSRNKRHSGVNQL
GGMFVNGRPLPDTTRQRIIE
LAHSGARPCDISRILQ----
----------VSNGCVSKIL
CRYYETGSIRPKAIGGSKPR
-----VATNLVVLKIAHYKR
ECPSIFAWEIRDRLLQEGIC
TTENIP-------SVSSINR
VLRNVCNDNQLPLSLGSTIS
QNEHNSNHTNNANHTLNSLM
NIQTMQSHEHLLHHAHTQNN
PFNSPLNRMPMVDFQSTHLN
RLMNHSNLNKRNYPLQLTVN
QVSCELNISPRSPQTSPPRF
--------------------
--------------------
-------------------N
HPQTAAFAAAAANNYGNDDD
DDKHNEFNLLMRNSSK----
--------------------
--------------------
--------------------
------------LYECLDSE
IEFPQENNHNNPLNHIPIEL
KKKEITRSEFERTHYPDLII
REQLAES-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MLIPESRIQVWFSNRRA
KWRREVKICSTPMEILM---
----------KTYGSKDNFS
KLSSKQNLLQFTNHSHSHSQ
PPP----------QQHQQHT
TNNYSDINHTLLNSLTSTSI
MNSM------------DHYH
HNQHKIDEKLNDNKKPGRNR
TTFTPEQLEILEEDCLKHAW
KFLELPSPKKLFNYSEPFDT
LNDIPRNSNSISNNETGTYT
ILNDVTRLNSLTNTHLN---
-KLKHTDSLNENGLTTKMDI
NNTITLFN------------
--------------------
HYNDTDHNDDLDQRHIQNIK
HDQRQIDIELIDKIQ-----
--------------------
----------------SNHL
DYQPIWLNSTDQIHN--YKT
DTMNPTLWYGMTYPQPSTLS
TDSAAAAAV-----------
--------------------
--------------------
-VAWNNNNNNSNFIHNQTAT
PKSTITSNEYDVILNSHEST
PIN--YGYLDRINSEFNTST
SS------------------
--------------------
--------------------
--------------------
--------------
>Sjc_0004220_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MICHSGVNQL
GGMFVNGRPLPDTTRQRIIE
LAHSGARPCDISRILQ----
----------VSNGCVSKIL
CRYYETGSIRPKAIGGSKPR
-----VATNLVVLKIAHYKR
ECPSIFAWEIRDRLLQEGIC
TAENIP-------SVSSINR
VLRNVCNDSQLPLSLG-SNH
PQNEHDSINNITGHTLNSLM
NKQTIHSQEHLLHHNPMQNN
QFSLSLNRMPMVDFQTSNLN
RLMNQSNLAKQNYPLQLTIN
QVSVGVNMSPRSPRNSPPRF
NHPQQTATFAAAVAAVQQQN
YPQSSSSVHNAIGYQNRLCE
MNNIIAAGPVITVSRTTTAA
TTTTTTTTTTASNSASSNDE
VSPTFQSSTNMYDTFSNFLT
HTNWPSWHNTSVSSAAVSSI
SNHTSSYHSNFNNCLTEPTE
IRQHSNYNSLPNFNLSNGIN
YVPFQQRLTNEHEENNQENT
INNQQVSNHCQQSSSTTLQN
RNIYELKKSNHRLHHNKQYQ
QSNVNCQNDNEFNEIITKSQ
MKLCNHVDSEIDFTGKSFNE
QYQLYTKSINSYPHGKSSET
NEFHYDDINNQNNLDTTELE
RTGSIINSSLESCTNESTLE
LCKVGNSLNQTTQCSSYKMN
ENSKDDNCSKQSYSILQYNP
INTINTTINYSSICSTNNIS
NNVVKMCSTPMELLMKTYGK
ENFSQFSTKQNHLEFTNPHQ
HYHHHQQQQQQHQQXXXXNH
NHKVDDKINKESILNENKKS
GRNRTTFTPEQLEILEDGQI
XXXXDDDDVDKLDKLHRIKQ
KLNYEQIQLNSFNEQKFQQQ
QQQQEHLSSVYHNYHQLLVQ
QDRQHQHRHQHQSQRQDQMN
MTKKEHVNMNWTYMSPSIHQ
EIPSPKKLFSYSEHFDPLND
IPHQSNVVDPTTRSETGTYT
VLNDVTRLNSLSTNHLN---
-KLKQSDILNENNLSKKLNS
NDTIMSMNSYNELDNTADLD
QKHDLSIMSNFQVDQTSVIN
SDFSKVTCLSYHVNDNSNNN
SENTNISTNVSSLMSSMTTA
DRNDSYDIPHSEGRQIEQEL
LSKTQLNHSKEMFSHIITQS
DYQPIWLNSTDQIQN--YKT
DQSNHSLWCGMTYPQPSTLS
TDSGIGSPPSSMLPSSGVTG
MSSVPVGHDNGSTNHLLPQI
LPDTSSQLSSMAVAAAAAVA
AWNNNNNNSTPHFLHTHSLT
PKSTLSSTEYDIMLNSLEST
PIN--YGYLGRINSEFNLLP
NTSAITSVLIPPTCCSTSPS
ASTSSLSLSQSSSSCSTHNN
TIINFDLSSLVGQTPLNNNS
NNTTTDINTNNTTNNSNNIS
NSSSSYYDFSRYFH
>TS_TRISPI_Contig0.d.FG.131_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MRNDKKGFSDLHRTSF
GVR----------------S
EQKAVRTIADSSYED-----
---IMKLKFFILGHTGVNQL
GGVFVNGRPLPDSTRQKIIE
LAHQGARPCDISRILQ----
----------VSNGCVSKIL
CRYYETGSIRPRAIGGSKPR
-----VATNKVVDKIADYKR
ECPSIFAWEIRDRLLQENVC
NQDNIP-----S--VSSINR
VLRNLAAQKEQQAA------
-QQEIYDKLRMSWNGGHSWL
YSP-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------AAAA
AIPQ----------------
--------------------
--------------------
--------------------
-------------------P
NAHVTSMNPSAPNFFTNFAV
TPSVESKKEFERTHYPDVFA
RERLAGR-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---INLPEARIQVWFSNRRA
KWRREE--------------
--------------------
-------KLRNQKRVFDCGN
TT------------------
------TTNPSHQNTGIS--
--------------------
--------SVSTAQ------
--------------------
--------------------
--------------------
ALSGVANFS-----------
---------MTPSLAGN---
--------------------
--------------------
--------------------
---SADVSSYSCMLP-----
--------------------
--------------------
--GAPPSRVYDPLH------
--------AYRSFGAASQNT
GHQMSSGP------------
--------------------
--------------------
-----VNTAGNVS--AGLIS
AGVSVPLQVPGQVLTDMSGC
TVTQYWPAR------LQ---
--------------------
--------------------
--------------------
--------------------
--------------
>F14F3.1a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MSDAGHTGVNQL
GGVFVNGRPLPDATRQRIVD
LAHKGCRPCDISRLLQ----
----------VSNGCVSKIL
CRYYESGTIRPRAIGGSKPR
-----VATSDVVEKIEDYKR
DQPSIFAWEIRDKLLADNIC
NNETIP-----S--VSSINR
VLRNLAAKKEQVTMQTELYD
RIRIVDNFPYNSSWYGQWPI
PMNGAVG-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----LNPFVPAPLIEPKTEG
EFEKDEDQKPPTEPED----
--------------------
--------------------
--------------------
-------------------D
AAARMRLKRKLQRNRTSFTQ
VQIESLEKEFERTHYPDVFA
RERLAQK-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---IQLPEARIQVWFSNRRA
KWRREEK-------------
--------------------
--MRNKRSSGTMDSSLSNGT
PTP----------TPGSVTG
SNMTNPIGSPASTPNRFP--
--------------------
---SNNSANLPTTN------
--------------------
--------------FVPQTS
QMYAG------------LSQ
PAMDPYSFG-----------
---------IANGFSMAP--
--------------------
--------------------
---------------YPQVT
DFQPHHMFQGRSP-------
--------------------
-------------------Y
DFPYPRMPTN-GHG------
--------FQQSMSPATTAV
GDIPTLSS------------
--------------------
--------------------
------GMSLPVSAVLNSID
PSLTHSQMHELSDLTQEHYW
R-----PQ------------
--------------------
--------------------
--------------------
--------------------
--------------
