>F15C11.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MNELL
AEMAAVSSRRKQSKPRRMSG
EGDAMMSPIDLS--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------TKSFDENNC
EKGAGG------ALPLEDRS
NILPHFSVPFANPQQFLSLC
AQLGNSSSRNVSSTASTTS-
----------SCPIQSCSQS
FSSPAALTWHVLDAHEDEQE
IFSCDVCTTTFSNGQDIREH
KCQKTLASRSTSVPPSTIPS
SVCFLSTPTTPCLQ--FSIN
--------ESIGTSEIREED
EEEDMDVEDGEHVANQLFG-
--------------------
------HLLQKSDDKSKMAS
LFNHAFPPFAAFP------N
MPPPFLMRQPFDPRADVFAA
GRHDNDD-------------
--------------------
-----------------DWE
ALMEISTS--DEAEKIRALV
GDKAVP--------------
----------TTDPNQCILC
RRVLSCKSALQMHYRTHTGE
RP--FKCKICQRAFTTKGNL
KTHMGVHRSKH--------S
FRGLPISLPPQLAAMHQHQH
QIAPPQRIHIHNPPTSAASA
AAAVAQIQAS--------QQ
CPICQQRFLNAGELAVHITE
HRNSLTQPPRVMPTPTTTRV
QTFP-----FVPFFTTPPSL
N-------ATDMSTQFNLAN
ILSAQLKNDSSPNT------
----DTSS----VEEKITRD
DPPKMASLSPSNSSDS----
---------------SSSVR
QDILESSEFEEKLKKLEEPP
--------------------
--------------------
-----ILEQQVSTTPNPKNE
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------NPLLAMQKM
WAETE---------------
-PPPPRQMPVLSKHQCGVCF
KHFSSSSALQIHMRTHTGDK
P-FKCDMCGRAFTTRGNLKV
HMGTHSWQQS----------
PSRRGRR--IFDVASSVTEK
PMLQSPILPT--------SG
APG-----------ASPLAM
LGPNGLSGLEMMMMLWRTVC
SVCQKVCQSPNELEQHLKEH
LNNGSSAAPTPLASAATPPP
S-------------------
-----------
>14470.m00033_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MHVRMIHISH
IRVHKRLRVG----------
--------------------
--------------------
-------------HCDQTLD
CHLCGICSAKFYNVERFIEH
KKNCSNSHKQSS--------
--------------------
--------------------
----------AITSNPDAES
VPIDLSKKH-----------
--------------------
--------------------
----------ASDDLDRKSI
LEDKSNLLFDPLQTIQSHQQ
QLLELYAQLAASHNRHTDSE
QSSDDGGNTSSYVLSPPSS-
--NGIAEKIHPCVAERCPQH
FSSRGALLWHILRRHPGEK-
LLQCKQCEERFPDPEQIHEH
RCDLLQRSASTGVLERGTSP
DADRGSVPARLQTSXTLVAR
S------PDAIASDLNYGGT
VPVNALTSVPAPPAPAPLS-
---------RMLFSQLFGAP
TATAVVAATAAATVPSTSAA
VKDTVLDLSNSAP-----NK
QQPQQQQFLPIPAIPQQFIR
PPFSFGQFAAAAAATLRSAP
HP-------------DLFLN
GPSSTPLLNNDDD-----WE
ALMEVSTT--DESEKIRALV
GDKALP--------------
----------TTDPNQCLLC
RRVLSCKSALQMHYRTHTGE
RP--FKCKICQRAFTTKGNL
KTHMGVHRAKHSFRGLAAAT
TNVHHQCPICQKRFFTAHLL
QQHVAQHTNQSSRNGILTPF
EVPVASTQG------FDRRT
EQHHPPSSAPPSNGTSSMLQ
VNAANLMLPMKNDLVSTPFM
PPFPFFPLGLPRGLSSPIAA
SSAP----QTSLGSMPFTIN
HQISPKQEEHQHQQ------
-QQLQXSIKSELLQLPLPVT
TRPESLPTAPLRLETSP---
-------------TVFSLSG
KSIHATKDDDEVASTSSSHN
------------------GL
SLPLIATALSANTNDPVANC
TACYQFFPNQIALELHMRTH
CEDTPLKCFICGTTYTTKGN
LKRHMSSKHQIHYPCSPDAN
SNNSDDDDDDDDDDDDNDED
DDDDEEEDHASFTQAGNEQM
DTFESQHGISESTDDDNSPE
QQQQQQEQQQEEEEEEQQRN
AETSDDKPSPTSSVSAAIPP
PLSSTPNPLDAMQKMWAETE
-PPPPRQAPVLSKHQCGVCF
KHFSSSSALQIHMRTHTGDK
P-FKCEVCNRAFTTRGNLKV
HMGTHMWQQS----------
PSRRGRRIFEFGADNILRSE
LLPAFGLGAEGAFRVGSFDP
KVNSLRSGRFGLDSPSSQST
AIPPAPPPPPSPFSVLPFPL
PLLPQVSNAGACTPNQMDTV
MWMWKTVCSVCQKICASPQE
LEKHLKQHLNGTLRTDNTNT
AKVTPLLQKTE
>Smp_128060_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MTNWPNL
KSSQQS--------------
----------SLNTELDFIH
QTLQHNKTDNLHHDEYTNP-
---KNQTAMNPHGSNHHRNT
ISPIELVYDQMKSSYDNLT-
--VNKLLNKQTVEDNQLYES
YIKGITMNQFMPFLPYPSSS
EHHSIPSST-IPYL------
-------PPTSSNVMNSCEG
RLTKAVNNNDLSPYSQISS-
--------------------
---LYGTPYQPSSSLSSSSS
VDLFTAAAAYAAA-----AA
AAAAATLNQSMMNMDEEYLM
NEES----------------
--------------------
-PNDELGPFKVSPRIEYYLE
QFMKIDQS---QNILWRQLA
DRFQRT--------------
-----------LGPNQCGVC
NKVLSCRSALTMHYRVHTEE
RP--FVCIICDKRFSTKGNL
KTHLGQHHETI---------
---------------EAYRT
AVAIAMATGTALPR---PPP
MSSTTVTVP---------LS
NSVSIPQVITSVSVSN----
--------------------
--------------HTSTTL
S-------SSNLSPSSSTTS
TSSSSFNKLTKNSP------
--------------------
ISPSLSQPIHVDDLKS----
--------------QFTSNT
FSLPWLPTSQQSLALLNSNC
S-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----LGTFPKRFDSNYPYDL
MLFDKDLEILTYTKVGIPEK
K-----MYLSPVYSHGLIEL
YLKKKKTKKG----------
NGRINDMFLNDDCYVHLWV-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------
>Sjc_0086350_Sjaponicum_Proteins.v4.0.short_header.pep_
-------MLNSTLNVNSIDL
HQHHQHLHHHQHSSG-----
--------------------
--------------------
--------------------
-------------VLNQRYK
IQLKKSTKKLWN--------
------------------KH
LIRHYLRCIDYRQQNYLRLR
KYLQMLLSQSSSTSSSSSLL
SSSASASSSLLLCNSKKATL
R-------------NFNHLS
KIESYFMKFHNYDNTIKMHR
IQPIVADETPLNTK------
--------------------
----YQKIMLNDNNNNDDVM
NENQLHNSDYNEQNVKENSH
FKFKDQTLLNNN--------
--------------------
----------NNNDDEIK--
--------------DEEIHV
EDQHEVHHNEVIEHNVEMMK
HENLKIINNDVMN-------
-----------SQKHLQHSH
ENNHTTTNEIVNHNSSISSN
HSDKHEISIDDYALDLTVHK
LLLDNHVDKNTSIYNLCNQN
VNNEYYLNYEKQRQNDAIGE
NQLYGYLRNMPMNHHLMNFL
PIPPEHHQISSMLSLKTSTV
TTSSTPPP-NPKPFLSLSSG
DKNVKLTSNNSDYQMTSLYA
ATHQQFELTKNSPSVSSSMN
FFTAAAYAAAAAAAAVSGNL
IQPTTSAITSTSVNSSMIIP
AVNSDIVHDSCTMNQLQTAM
ITALMKSSKLPQSSDVMNNT
SHNNANTCSSISQALLTLFT
NPNCNWPPKSSTPVPNNTNN
SNDSESIQKNQLPQHKLPP-
----------PPPVHPPSSY
YYHQHQQHHYPSSIINVNNN
IDEEYLMNEEGPD------D
IPQSTSPMECLNYNEKMNFL
DNNNNDDDDDDDEYLISQSK
HQHQ----------SQSQQQ
TQQTTRTSASSSRPSEDYLE
QFMKIDQS---QNILWRQLA
DRFQRT--------------
-----------LGPNQCGVC
NKVLSCRSALTMHYRVHTEE
RP--FVCIICDKRFSTKGNL
KTHLGQHHETI---------
---------------EAYRT
AVAIAMATGTALPR---PPP
MSSTTTIPP-----------
TISLPPIVTSSVSVSN----
----------QAPATSSSSP
SSAS--------ASSTKLSI
D-------SSIPSPTSHPNH
IDYSKLNDELQMTS------
--------------NTFSLP
WLPTNIFNNSSNNYQAR---
---------------LDSNA
YDFMLFDKGKENYTTTNHTT
N-------------------
--------------------
---------NLSVTTNHFSH
N-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------YGGYT
YSHQS---------------
--EFPKSVSDCPISKCIDAS
NNNNNDSNHIRKDYDVENND
E--ACEVANVSVITIDDTNN
FDKQYTSLNE----------
PLKTNRIPEYKLTIPSSASS
ISLVTEGNVN----------
--------------------
--RSISTPMNIFTIEQASSS
LLNSSFPLSKSTATTTTTTT
NTTTNTNTTTTTNTAIIAKK
DLFLDCTTNKFLSVANCL--
-----------
>Mh10g200708_Contig931_98..2918_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---LADEDDDWEQMMEISCT
DEAEKIRELAGENAQPPTDP
NQCIICRRVLSCKSALQMHY
R-------------------
--------THTGERPFKCRI
CQRAFTTKGNLKTH------
--------------------
--------------------
--------MGVHKSKAPLRQ
HIFALGSNSDSP--------
--------------------
-----------ERCHS----
--------------SNENLI
NSDLFSNSGNLNQRFSMEEG
SQPLNNLNRSFP--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
LPSSILFSSSSSTIVGRNNL
IYGSSLPPHSIGSLPQHFPP
PFPPTFMPNFPPINGIPPPF
QLSMADSSQAALAAQLQLF-
----LSSNPQFQLNENNSSA
IDHGLALSNLFLPPKDEQKM
EEENEKMKNEGKDEDGLEEN
EREGKDKIEEETSSSIYYSS
PNRKMINEKNNEEN------
--------NNLGLPAFFIQK
LAAAAKFKIDEQFMSSSSN-
--------------------
----VKNSYKEEDDQEEEGG
KTKKKKKRMNNDG-----IE
ELEVEKFSKIIDGNEEEKKK
DEEEDEDNKERIG-------
---------------SSTSP
SMLESVPQTSFSSSTSIKVK
EEIKKEKEE-DPLENLQRIF
SAADSP--------------
----PPHPPSSSAMSPSSAC
FLLAPIQKPPNAKHHCRWCD
RP--YKCEICERAFTTRGNL
KVHKGTHSLPQN-------P
SRRGRRIFDMEETILGTIRQ
QQQPPSLLFSQSPPLASNFD
EQQRQ---------------
---QQAAAAIANLLAN----
--------------------
------------VVGNNNSF
G---------LLNEIATTSN
ASIPSLINNFSANVS-----
------------ETPSASNQ
LPSTTASPLSLATNAS----
-------------TFAAAAA
AQLAALGNNDGQQ-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MLMNLLF
QHLQN---------------
-VEMAERIEEEEEREEEENG
EELKEREDSVENKKANSIRN
N----NVEETSVIRENKLNN
ERIEEYLKEN----------
-IKKKNHSSENNIIVPVHNT
TIL-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------
>TS_TRISPI_Contig31.SNAP.77_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
GVHRTKPAYRVC--------
---------------HQCPE
CDKKFANAAVLQQHMRSHVN
SNNAAGRFESFDSKLSMFNY
DGRFFPMPFQNLPNPENNPT
VP--------VTLASTTMPV
NSNLESSSSSSSSNKNNTNN
VGGGGGAGGSSSSS------
--------------------
--------------------
-----GSSNNNNNNSSDINN
NIAKITTTTNATVN------
--------------------
--------------------
-------------NGTVATS
TAFGTANTTSTLSMKFEEEN
ANPTTVENIAKS--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--NATEINATAAAISSNLAF
GPTADSTRQPTGIVPSSTTS
DSSSVPQGSPNAFSPLAVFN
MRSKFFPTTFIGIQSQTPPI
AAAPQFSGRPSTTCNICFKS
FACQSALEIHYRSHTKERP-
-FKCQICSRGFSTKGNMKQH
LMTHKMRPLSTTSSLDTTST
SSLNGEECAQQQQQ------
--------QQQQQQQQQQQQ
LKQLADSNVEGFLNFEMAD-
--------------------
-------LVKSPTVMMETQP
LETDEMMLNADEK------Q
QVNGEMNAPTPLES------
--------------------
--------------------
------------------IQ
RMWSQAETLAASNTTTPSAV
AQSKKQ--------------
---------TVFSKHQCQLC
CKHFSSASALQIHMRIHTGD
RP--FKCNICERSFTTKVHM
GTHMWNTNNQR--------G
RRLFDGSLTQLPDATSPPMV
QNHTGVSGICQSFGGNSDKD
EGILAASAG---------ET
LLCDEISQQLLQQHHD----
------------NERMATDE
QQYP-------VVMQSSSSS
Q-------LLNMAAKLELNP
MAIGGSQETYQGGG------
--AGAGAGVSVSFPTFVTNS
YFTSSSVAAAAAANSAP---
-------------KTNAAVT
ASIVAVTTTTANAVTATATT
T-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------TTTTSAAA
SVTTT---------------
-VATVPSITVPNEYICAGTG
GGLACSSVFVPGNAASVGSS
G---SITNGHITSASDRLPF
MLGNNNNNNS----------
SWPSKCSVCLQMCSSNVELD
AHMRFHIMHP----------
--------------------
----------------DATG
LVAGGGGGGGPRATAAVAEE
EIHKRRAN------------
--------------------
-----------
>TS_TRISPI_Contig31.SNAP.78_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MSFK
VRIVVILVNKRP--------
------------------IR
VDRQFYSFNSFLEHELVCEN
EWPVLIP---NEEFQHQQQQ
QTLMRPEGNNGLEGSTRAGI
IQ------------------
--------KENFSNRQNLIP
VREDPGALASSKND------
--------------------
--------------------
-----------YDDDGDNNN
GNVDGGSRTQAG--------
--------------------
--------------------
----------------SMMR
VSDFFVEQQQMRNCSMSNKI
EQNHHHLLADPP--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------NSAVEMNQEL
VQSTTT-------TTTTTTM
DTTTTDTTPYNLFQMYSLLM
NLYQQQIQQNQLISFLMQR-
-------IVGENGMPSCFPP
SLTPNLVYGKDFKELYQQG-
-CVSPLLGSSASSVNELSVS
GKQHQQQHSTTFGSEANLAN
FTCQPGPFPPPPPH------
--------SAAAVAATSGLA
SNPMNAGFIQKHIKHLLEN-
--------------------
-------VGAGGDGTETENS
NAQQRLSSSSSLS------L
HKQSSTNSAMFHGNHQTKVP
GVAALLHHGMEK--------
--------------------
-------------------N
PAQSVKSSLLTSTTNNMPSA
KGTDWK--------------
-----------SPNGAQRRP
KRCLSCPPEPAKQYRKLSDG
NTNGNVCSFISAPNSPQDIL
SNNNNNNNNNS---------
---NSSLLNYELREAGSVSS
NASYGASPAGTIERLATSHS
TLPETTDFS-----------
-SRPELQPNTKNMFGN----
--------------------
------------LPTHHHHL
QP-----FYQAVNAFDCLTA
AAAAAAAAAAAATAG-----
----------GVAPDMMPLN
ATVGGVADNNNTMLNSVIG-
------------TADVDDDW
ESLMEITTTDESEKIRKLVG
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----EGNDNVTDPNQCVICR
RVLSCKSALQMHYRTHTGER
P-FKCKICQRAFTTKSSL--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------
