>13401.m00092_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MGSTPGG--
--------------------
-----LEGNFPPPPAELPSF
YMQQ----------------
--------------------
--------------------
--------------------
--------------------
--------------KQTTFF
PP------------------
--------------MPPQLH
P-----------------PL
ESLPTTLPGTVAN-----SE
SPSTTFPILPPSSF---PPP
PSEFTLPSMQLVAPSTPPSL
SVPSSCAVPVTEQASVTVPS
ESHDATIAATTITAADIPVT
LHQTVSSTPIPPPATAQMII
PMNVQETEQT-ISEINDESK
KMGVFNWFQQAVQQSQFLSK
MANKAKVGMDSVLTVLDPGM
RDFLNG------SDVLHAVI
LCYANKQIIDAVKHGLLQTF
SEIIFDEINAEVELPTTNIQ
IIGYESAWKKV-KERLATLR
NS--NTVSPETTLFIVQP--
FLYQVDDCWFDTALILA---
-------------QKGDVEV
SVFMQATQVDADVIATLQKH
TPKEYPS---DAFATTVGYA
YAEMYGGDPDDWQRTSLSFS
STELYRAASIALASNLKRIL
SMKISSRS-
>C04G6.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MGDQDGKKKPPFDM
PPPPK---------------
----PLSFEMPKPPVLQPNI
ASLL----------------
--------------------
--------------------
--------------------
--------------------
---------------QKTNT
TG------------------
---------------EDVKS
K-------------DAQPSV
TPVPPPTFNPVPN---PFAP
RPKSVSPN---------PHP
DVPAVTVGALSAPADKSETE
GEKIEKPSETAQAHVENVKK
PEKPSSLGTHPLTTEIPITP
MVEEAKPITSPAVVEVSSHA
ESVKSSIDSS-NLFTDKVDM
SGGLMSWLTKTVTESKLLSD
VAGKAKAGVETVMTTLDPGM
KPFLA-------EHGVIEFA
LFNCDADLLTVASDAFTKSG
AMAICRGLTSVIANFRP---
LVAGEEKARKMCEIKVEAAR
KT--NKAKEDAAVVVIQP--
FLMEISGRYYSTCKIVL---
-------------HHESKYF
DAISQLLEIPSTLVEVIQRA
AKSEGLP--DDEFSTSVTQA
IKNVYKTSVTTWEPGSFAPY
DSKELLSIAFAS---VSQQL
LRNLAPVN-
>TS_TRISPI_Contig20.SNAP.161_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MAEQTNNVNQSD--
--------------------
-------LTNPPRSAVSSST
TAKT----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------LSC
KNFSTVLSTFISN-------
----------------IPPP
SELP----AFATIMGREYTP
SLSSQIPTTSAKSQAPLDPP
LPVPTVPDLSPSCNLLVSDE
NVSMSLAVDRPPDQDVSITM
DVNYSECENLPAIQKNIYDY
TPSVWRWLKDTVSNNNFLNT
VASKAKDSVGTVIMTLDPQM
KDYLSNSSSSSTEKTWTMAY
LITSAEAELFAVRSAMQTVL
KSIDVEAIN-RTQLPDLPLT
PLGFQSALLCA-RRRVAQIR
DINLQTIDDSQPVITIEN-F
VVELHADTWFHCDCVYLN--
------------VRELSHET
YVYTQLTPMHANLISHMRKC
SEGKTFSPETPGFSVSVEQT
ISHFG-INPWQWFPNTITLH
RQDMIKNAAIA----VASLY
KHAMSNTE-
