>Mh10g200708_Contig1548_16997..18411_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MTFEVLKKSLGKGTFGK
VILCREKRTSRLYAIKILKK
EVIIQKDEVAHTLTENRVLQ
R---CKHPFLTELTYSFQT-
--------------------
--------------------
--------------------
---TDRLCFVMEFAIGGDLY
YHLNRQVGKYKEGFSESRTR
FYGAEIVLALGYLH-DNNIV
YRDLKLENLLLDRDGHIKIA
DFGLCKEDISFSGRTRTFCG
TPEYLAPEVLEENDYGRSVD
WWGVGVVMYEMMCGRLPFYS
KEHEKLFEMILQCSLRFPSR
LSPEAKVLLSGLLVKDPNKR
LGG-GPDDYREIQATAFFKP
IDWEKLYRKEIEPPFKPQLS
SESDTSYFDSEFTREAVQLT
PPAVR-NGPLDTLDEMDEIQ
NNFVQFSFHHGELGSSLREN
SEIMEE--------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Minc16984_MiV1A1.short_header.longest_isoform_
--------------------
-------MSTASQKVRTRED
VIYEG-------WLLKRGEH
IKNWRQRYFVLFKDG---SL
LGYK--SKPIDSYNDPLNDF
TVKDVQLMKLDRPKPNTILV
RGLQWTTVIERMFCAETPDQ
RDCWINAIKSVAENLKREEL
--------------------
--------------------
------------LHGGVQ--
--------------DQEMMD
VSQLPQAMDPTQYP------
--------------------
----------------WTYQ
PTPPIFDPQQHQQF------
ENGYMPGLQGFGG-----IP
NQFHTTVAAAGAAQQ-----
------------------KQ
LLHEAMVKAQAAANAAAMA-
--------------------
----------------TSSG
GNVCAEAVAAAEKAAAELK-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------KPE
GQ------------------
--------------------
----------------KTRS
RITLDDFEFLKVLGKGTFGK
VILCREKRTSRLYAIKILKK
EVIIQKDEVAHTLTENRVLQ
R---CKHPFLTELTYSFQT-
--------------------
--------------------
--------------------
---SDRLCFVMEFAIGGDLY
YHLNRQVGKYKEGFSESRTR
FYGAEIVLALGYLH-DNNIV
YRDLKLENLLLDRDGHIKIA
DFGLCKEDISFSGRTRTFCG
TPEYLAPEVLEENDYGRSVD
WWGVGVVMYEMMCGRLPFYS
KEHEKLFEMILQCSLRFPSR
LSPEAKVLLSGLLVKDPNKR
LGG-GPDDYREIQATAFFKP
IDWEKLYRKEIEPPFKPQLS
SESDTSYFDSEFTREAVQLT
PPAVR-NGPLDTLDEMDEIQ
NNFVQFSFHHGELGSSLREN
SEIMEE--------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Minc09327_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
------------------MN
TGNGDGGGFFAPAPA---MV
SASPTAPIPQQQSKPSITGQ
QEAPAGQGQRTRKASSTSNF
LASLASSIYGSSTPSGGTGS
SHTQSFSIQGDIDATQQRNS
-----PLPSLSSIGSDATLN
RKMSTASQKVRTREDVIYEG
WLLKRGEHIKNWRQRYFVNG
SLLGYKSKPIDSYNDPLNDF
TVKDVQLMKLDRPKPN----
--------------------
------------TILVRGLQ
WTTVIERMFCAETP----DQ
RDCWINAIKSVAENLKREEL
LHGGVQDQDMMDVSQLPQAM
DPTQYPWTYQPTPPIFDPQQ
HQQFENGYMPGLQGFGGIP-
--------------------
------------NQFHTTVA
AAGAAQQKQLLHEAMVKAQA
AAN-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--AAAMATSSGGNVCAEAVA
AAEKAAAELKKP--------
--------------------
-------------EGQKTRS
RITLDDFEFLKVLGKGTFGK
VILCREKRTSRLYAIKILKK
EVIIQKDEVAHTLTENRVLQ
R---CKHPFLTELTYSFQT-
--------------------
--------------------
--------------------
---SDRLCFVMEFAIGGDLY
YHLNRQVGKYKEGFSESRTR
FYGAEIVLALGYLH------
-DNNILENLLLDRDGHIKIA
DFGLCKEDISFSGRTRTFCG
TPEYLAPEVLEENDYGRSVD
WWGVGVVMYEMMCGRLPFYS
KEHEKLFEMILQCSLRFPSR
LSPEAKVLLSGLLVKDPNKR
LGG-GPDDYREIQATAFFKP
IDWEKLYRKEIEPPFKPQLS
SESDTSYFDSEFTREAVQLT
PPAVR-NGPLDTLDEMDEIQ
NNFVQFSFHHGELGSSLREN
SEIMEE--------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>C12D8.10b_wormpep204.longest_isoform.pep_
--------------------
-----MSMTSLSTKSRRQED
VVIEG-------WLHKKGEH
IRNWRPRYFMIFNDG---AL
LGFRAKPKEGQPFPEPLNDF
MIKDAATMLFEKPRPNMFMV
RCLQWTTVIERTFY------
--------------------
--------------------
--------------------
--------------------
--------------AESAEV
RQRWIHAIESISK-------
--------------------
------------KYKGTNAN
PQEELMETNQQPKID-----
--------------------
--------------------
-------------------E
DSEFAGAAHAIMGQPSSGHG
--------------------
----------------DNCS
IDFRASMISIADTSEAAKR-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------D
KITMEDFDFLKVLGKGTFGK
VILCKEKRTQKLYAIKILKK
DVIIAREEVAHTLTENRVLQ
R---CKHPFLTELKYSFQT-
--------------------
--------------------
--------------------
---NDRLCFVMEFAIGGDLY
YHLNREVQMNKEGFSEPRAR
FYGSEIVLALGYLH-ANSIV
YRDLKLENLLLDKDGHIKIA
DFGLCKEEISFGDKTSTFCG
TPEYLAPEVLDDHDYGRCVD
WWGVGVVMYEMMCGRLPFYS
KDHNKLFELIMAGDLRFPSK
LSQEARTLLTGLLVKDPTQR
LGG-GPEDALEICRADFFRT
VDWEATYRKEIEPPYKPNVQ
SETDTSYFDNEFTSQPVQLT
PPSRS--GALATVDEQEEMQ
SNFTQFSFHNVMGSINRIHE
ASEDNEDYDMG---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>14992.m11148_BMA1.short_headers.longest_isoform.pep_
--------------------
-----MSTENISIKSQKLGE
AVHEG-------WLMKRGEH
IKNWRPRYFVLFKDG---AL
LGFRAKPDPDQPLPDPLNDF
TVKNVQLMKVERPKPNTFLV
RGLQWTTVIERMFN------
--------------------
--------------------
--------------------
--------------------
--------------AESAEI
REGWINAIK-----------
--------------------
--------VVSDSLKESESE
MDTEIME-------------
--------------------
--------------------
-------------------E
SSILSEVNRQITTTHEQLK-
--------------------
----------------MSVN
SGG-RDMMSMADAAEAAR--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------RD
KISLEDFEFLKVLGKGTFGK
VILCKEQRTRKLYAIKILKK
EVIIQKDEVAHTLTENRVLQ
R---CKHPFLTQLKYSFQTP
FHLCFVMEFANGGELFFHLQ
QNRIFSETRTQFYGAEIILA
LGYLHEQCIVYRDMKELRYS
FQTSDRLCFVMEFAIGGDLY
YHLNKEVQLKRAGFSESRTC
FYGAEIVSAVGYLH-ANNII
YRDLKLENLLLDKDGHIKIA
DFGLCKEDISFGDRTRTFCG
TPEYLAPEVLEDNDYGRAVD
WWGVGVVMYEMMCGRLPFYS
KDHEKLFELILTGAIRFPSK
LTAPARALLTGLLVKDPNQR
LGG-GPEDAQEIMQHEFFNN
IDWEKLYRKEITPPFRPNVQ
SDTDTCYFDKEFTQAPVQLT
PPSVR-SGPLDTVDEMDEMQ
NNFVQFSFHNAVSSPLRNVN
DTMDALE-------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>F28H6.1a_wormpep204.longest_isoform.pep_
--------------------
--------MSTENAHLQKED
IVIES-------WLHKKGEH
IRNWRPRYFILFRDG---TL
LGFRSKPKEDQPLPEPLNNF
MIRDAATVCLDKPRPNMFIV
RCLQWTTVIERTFY------
--------------------
--------------------
--------------------
--------------------
--------------ADSADF
RQMWIEAIQAVSS-------
--------------------
----------HNRLKENAGN
TSMQEEDTNGNPSG------
--------------------
--------------------
-------------------E
SDVNMDATSTRSDN------
--------------------
--------------------
-DFESTVMNIDEPEEVPRK-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------N
TVTMDDFDFLKVLGQGTFGK
VILCREKSSDKLYAIKIIRK
EMVVDRSEVAHTLTENRVLY
A---CVHPFLTLLKYSFQA-
--------------------
--------------------
--------------------
---QYHICFVMEFANGGELF
THLQRCK-----TFSEARTR
FYGSEIILALGYLH-HRNIV
YRDMKLENLLLDRDGHIKIT
DFGLCKEEIKYGDKTSTFCG
TPEYLAPEVIEDIDYDRSVD
WWGVGVVMYEMMCGRLPFSA
KENGKLFELITTCDLKFPNR
LSPEAVTLLSGLLERVPAKR
LGA-GPDDAREVSRAEFFKD
VDWEATLRKEVEPPFKPNVM
SETDTSFFDREFTSMPVQLT
PPRRG--EELPTVDEEEELQ
ANFIQFASYYVSGSLERSYD
TNRSADKYEIR---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>TS_TRISPI_Contig1.a.SNAP.55_T_spiralis.071204.pep_
--------------------
------MYTHIYKSVASTVA
YKHNG-------QLAKVLAA
CVSVTLRIIMVIEKF---VF
SLAVLPTYYACILCQSSFIN
SIFTSNVNRFVILRRYGICY
KVKVSSKTVQETVDTQAVND
EHFEFTLRPLWEIKFSIRIS
--------------------
--------------------
----SRSFLQRLVSSTILSA
GMRP---------PVDSKIV
HEGWLMKRAETSQTCEN---
--------------------
-------FAFHLCLGEHIKN
WRSRYFILFDDGTLLG----
-------FRQRPENGSYNDP
LNDFTVKDCQLMKVDRPRPN
-------------------T
FIVRGLQWTTVIERTFNALS
--------------------
------------PEDRENWV
NAIESVSQSLKQLKNDAGEP
MQQ-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------SDQNIFSESGLPT
QLEQLMKIADPS--------
--------------------
------------------PR
KVSLDDFILLKVLGKGTFGR
VILAREKQTDQLFAIKILKK
EVIIAKDEVAHTLTENRVLQ
K---TKHPFLT---YSFQT-
--------------------
--------------------
--------------------
---SDRLCFVMEYACGGELF
FHLQREK-----LFTEERTR
FYGAEIVSALAYLH-ENNIV
YRDIKLENLLLDREGHIKIA
DFGLCKEDISFGEKTKTFCG
TPEYLAPEVLEDNDYGRGVD
WWGTGVVMYEMMCGRLPFYN
KDHEKLFEMILTETVKFPGK
LSQEAKSLLSGLLMKDPNRR
LGG-GPEDAQEIMAHPFFEP
IDWQALYEKRLVPPFRPEVQ
SDTDTSYFDQEFTRESVDFT
PPAQFG--TLSSISEIDEQP
-YFTQFSFHGNSAQRQSFHQ
FDDI----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
>Smp_073930.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
-----------------MEI
LCNYSQNPVVGSSKS---SH
TEHEPVSVSAKVQDTTASQR
RNINCTSSNIFSSLQNAHLP
VVPNPNVLFKNELT------
--------ENYSDNLTPRIS
--------------------
--------------------
--------------------
-------------PYLLGML
QCRPVSLPLTRNVVKEG---
--------------------
---------WLMKRGEHIKN
WRRRYFKLREDGTFYG----
--------YKIQPKDDMAQP
LNNFTVRDCQIICLNKPKP-
------------------YT
FLIRGLQWTNVVERLFFVET
--------------------
----------------EAER
NYWLSAIQSVANRLKSSFEQ
PVS-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------VHNLN
LAENMIVDIPQR--------
--------------------
-----------------PVK
RYSVNDFRLLKVLGKGTFGK
VILCQENETGHFYAMKILKK
SVLIEKEEVVHTMTENRVLQ
Q---CKHPFMTELRYSFTT-
--------------------
--------------------
--------------------
---PNYLCFVMEYVNGGELF
FHLQRDR-----VFSEERAK
FYGAEITLALGYLH-HQNVV
YRDLKLENLLLDKDGHIKIA
DFGLCKEDMYYGASTKTFCG
TPEYLAPEVLLDNDYGRSVD
WWGLGVVMYEMMCGRLPFYS
SDHEVLFELILQENVSFPAR
LSHPAQDILSRLLIKDPTSR
LGG-GIQDVLEVMAHLFFAS
VDWDRLIRKDIQPPWKPDVV
DEKDTKYVPDEFKDTSVDLT
PPNDN----EDNMNRIVDGP
-YFEQFSFHGSRQSLNSRII
VHSDSKGIPSNCANQMGFVL
KFPVRFLTSLGGSLKASSLK
VAVSTKHLVASPTFSQFNYI
IHRQFSDTPSDNSVNNVSDL
VKGSRIVLFMKGNPNEPRCG
FSNAVCRILEMHGILEKASK
GDDPELFASYDVLENEELRA
AAKVFADWPTFPQLYFDGEF
IGGCDILLDMHRSGKLTEEL
ERLGIGSALAKVSDKEKT
>Sjc_0112070_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
-----------------MEI
LHNYSQNPVVGSSESNERSC
TEHESVSLSAEGQDTSASQR
RNADCIRLNIFSDFKSSHLS
MVTNRNVVFGNEQIG-----
---------NYPDILESRIS
--------------------
--------------------
--------------------
-------------PYLLGML
QCRQVSLPLTQKVVKEG---
--------------------
---------WLMKRGEHIKN
WRRRYFKLREDGAFYG----
--------YKIQPKDNVTQP
LNNFTVRDCQIIRLNKPKP-
------------------YT
FLIRGLQWTNVVERLFFVET
--------------------
----------------EAER
NCWLSAIQSVANRLKSSCEK
PVS-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------VHNLD
LSENMIVDIPQR--------
--------------------
-----------------PVK
RYSVDDFRLLKVLGKGTFGK
VILCQENETGHFYAMKILKK
SVLIEKEEVVHTMTENRVLQ
Q---CKHPFMTELRYSFTT-
--------------------
--------------------
--------------------
---PNYLCFVMEYVNGGELF
FHLQRDR-----VFSEERAK
FYGAEITLALGYLH------
--------------------
------------NQNVVYRY
GEKFCFKIILYPINWISFYD
WVVCGSLSLNLIS-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------
