>TS_TRISPI_Contig11.a.FG.119_T_spiralis.071204.pep_
--------------------
--MPVK----KQEAHRALEL
LEEYHKSLIRADDRQLREAI
ERVITIFKCRLFQALLEIQE
FYEETLLNEH----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------KSLLQKTV
ETNLVADRWE----------
--------------------
--------------------
--------------------
-GNPPIVGPNTSNKTT----
----------------NGSH
DDNWEYEEIILEKGTIAGLG
FSISGGRDNPHVADDPSIYV
TKIIPGGAAAYDGRLRKDDI
ILRVNQID-------TTDVY
HHVAVDALKQAGNIVKLFVR
RRVRDDDATA----------
----------TTA-------
--------------------
--------------ADCAVG
AGVERRIELLKGN------K
GLGFSIAGGVGNEHVPNDA-
-GIYVTKIIDGGAAQVDGRL
AVGDKLLAVGNCSLDNVTHE
TAVAALKATADRVVLTVLKP
ISSGSAIPFADGNEPGLGSD
HGLFDHSATTPTTTGGTATA
LRLSRQQEMRRAMGAGAEDA
LSASASSSSYTPYALPEPAA
TVAERRHSVGAVFGEPNADA
GGAG----------------
--------------------
--------------------
LPGRSPRRVTLNKGGAGGGL
GFNIVGGEDGEGIYISYILP
GGVADVSGLLHKGDQLLEVN
GVDLRNATHEEAAAALKSG-
-GQKIYILAAYRPEEYYRFE
AKIEQLRNVMIDQNSPQP--
---------------RRELY
VRALFDYDPSKD---SGLPS
RGLAFNYGDILHVTNACDDD
WWQARKRLK--DGTEDGYGI
IPSKRRKF----PFMKSKER
LHEELENER-----------
--------------------
--------------------
--------------------
-----LEDYILSYQPVEQH-
--------------------
--------------------
--------YLNYVRPVIILG
ALKDRINDDLTAEYPDNFAC
CVP--------HTSRPRREH
EVDGRDYYFVS-RDVMEHDI
HNHLFIEAGQYNGNLYGTSI
GSVRDVSEQNK----HCILD
V-------------------
---------SGNAIKRL---
--------------QLAGLY
PIVIFI------------KP
YGPGQ--LM----------E
WNRRITEDDAVRVYQRCLQI
EQEFGESFTAVVQ-GDVPEE
IYERVKEVIRDQSGPVVWVP
SQEGL---------------
--------------------
--------------------
>14961.m04904_BMA1.short_headers.longest_isoform.pep_
--------------------
--MPVHR---AGEAHRALEQ
LEEYHASLVSASSAELRRQI
EKLINNFKGALFQSLIDIQE
LYEDTLLNER----------
--------------------
--------------------
--------------------
----KSLEQKAYETR-----
--------------------
-KIAQRWETNPPFGRINAPL
AS------------------
--------------------
--------------------
----------LDSSLHYGDQ
TIPYTYTNGAEYNVQS----
--YSLREQRKQFTSGDGWRS
TERVTQMT------------
--------------------
---PTGQIVTTTTSGL----
----------------IDND
GTEWEIEEVVLEKG-HTGLG
FSIAGGLDQPYIDGDPSIYV
TNIIPGGAAAADGRMKIQDI
IMKVNTTD-------CTQVP
HETTVNALKNAGNVVRLILK
RRRSGRESAD----------
----------FRGGVVSPYV
SPLHDGSSVSIIPPPLPPAH
SSYTNIPIQRTLREIERLER
IPGAQKIDLFKGS------K
GLGFSIAGGVGNEHVAGDT-
-GIYVTKIIDGGAAYHDGRL
RVGDKILAVDNIILENVTHE
FAVNTLKQTASKVTLVYLKN
P--------HPELLP-----
-----------NFDDSGNRS
LGAPPTPAR-----------
---SAASLHHDSFDTQQSFH
TIAQQELP------------
--------------------
--------------------
--------------------
---LGPRIVHLNRGMQG--L
GFNIVGGEDGEPIYISYVLP
GGVADLSGNVRKGDALLQVN
GVNLRNATHAEAARALKEA-
-MNPVSLTLQYRPQEYGQFE
AKIDQLRRDLISGGAVTFGG
P--------------RKELF
VRAMFDYDPARE---AGVPH
RALPFFYGDILHVTNVADDD
WWTARLVTE--SGEEGMEGI
IPSKKR------VEKKERQR
RKQVNFNAGSQSLPRGMDGR
RGSRSQL-------------
SFSRKFP-------------
--------------------
-----FVKSTDKLNEFTDN-
--------------------
--------------------
--------ELNYPRPVIILG
AMKDRINDELVLRDRDRFSS
CVP--------HTSRPPKPN
EIDGRDYHFVS-KEQMQEDV
RNNQFIEAGQFQDNLYGTSI
NSVREVAEMGR----HCILD
V-------------------
---------SGNAIRRLQ--
--------------SIANIY
PIAVFV------------KP
QTPHQ--IM----------E
WDHSINEDDAHTIYQRCQRT
EQNFGDLFTAVVS-GQTFED
LVRRVLNVIAEQSRPHAWVP
SRAQVF--------------
--------------------
--------------------
>Mh10g200708_Contig1005_52825..57736_M_hapla.pep_
--------------------
--MPVR----STEAHRALEQ
LEAFHAALTRPSDADLRCAI
ERVIGLFKTNLFQALLDIQD
FYDNTLINER----------
--------------------
--------------------
--------------------
----VPLDLKTLET------
--------------------
KKLAERWEANPPFSSGKSSL
FG------------------
--------------------
--------------------
------------EQRRPPPP
PIFPSTTTNYAATSNGLPYT
NGVDTNEPTTKTTSQHSYSY
HEQSRHLTKDG---------
------------WQTSEYKT
KTLDTPGAFQTETVSNVG--
---------------LIDEQ
GREWEIDDVVLEKN-QFGLG
FSISGGRDH---STGPYIRV
TDISPGGAVARDGRIQVGDI
ILKVNTTE-------TVDVQ
HQVAVDALKSSGSVVRLLVK
RLKPPLATAE----------
----------TFRSSPIDPL
SRVSPASLSASNFNIG-TSP
PIVPSHQQPIISEAIRDLER
KPGVKRMELIKMLNPECRSK
GLGFSIAGGVGNQHIPGDD-
-GIFVTRIIEGSPAYFDGRL
QKGDQILAVDNIIFNNVTHQ
FAVQTLKNTGERTSLLYMKN
PHP--ELPLDGRQLD-----
---------ESDRSRSLQTF
ETIGITSP-----------T
VNVDSHSIGGGFSQQQISSS
SLKQPQLD------------
--------------------
--------------------
--------------------
----VPRLVRLRKLDTG--L
GFNIVGGENEEPIYISHILP
GGAADLNGNIKKGDVLLRVN
DVDLTSATHAQAAQTLKAIP
LYSEVQLLLKYRPIDFQNFE
QKLERLKAEMILMQQQQQQP
YIQQQQ----------SDFY
VRALFDNEPSRD---TGLPH
RSLSFRYGDVLHVLNATDDD
WWTARRVIDNLSGEEGPEGI
IPSRKR------VEKRERQR
RKQVNFNAGSQSLGRNSTTS
GTSAAG--------------
-FGGMEGRRGSRSQLS----
--------------------
--FSRKFPFVKSTEKLNEYN
SDG-----------------
--------------------
-------AEISYIRPVIILG
ALKDRINDELVTQNPERFSS
CVP--------HTSRPARDN
EVNGRDYYFVT-KAEMERDI
KSNLFIEAGQFQNNLYGTSI
AAVREVADSGR----HCILD
V-------------------
---------SGNAIRRLQ--
--------------DAARIY
PISIFV------------KP
FSYQQ--LR---------DW
SNQQLTDEDAIRQYERCQRQ
EQNFGDLFTSIIT-GQTPDE
IYSRVLRTINEQSRHDIWVP
TNEQLP--------------
--------------------
--------------------
>Minc15755_MiV1A1.short_header.longest_isoform_
--------------------
--MPVR----PTEAHRALEQ
LEAFHAALTRPSDSDLRCAI
ERVIGLFKTNLFQALLDIQD
FYDNTLINER----------
--------------------
--------------------
--------------------
----VPLDLKTLET------
--------------------
KKLAEKWETNPPFSIGKSSL
FGE-----------------
--------------------
--------------------
----------GQQRRPPPPP
IFPSTYAATSNGLPYTNGVG
GGDTTEPLTTKTTSQHSYSY
HEQSRHLTKDG---------
------------WQTSEYKT
KTLDTPGSFQTETVSNVG--
---------------LIDDQ
GREWEIDDVVLEKN-QFGLG
FSISGGKDHS---TGPEIRV
TDISPGGAVARDGRIQVGDI
ILKVNTTE-------TVAVQ
HQVAVDALKSSGSVVRLLVK
RLKPPLATAE----------
----------TFRSSPIEPL
SRISPVSLSASNFNIG-TSP
PIVPSHQQPIISEAIRDLER
KPGVKRMELIKMLNADGRSK
GLGFSIAGGVGNQHIPGDD-
-GIFVTRIIEGSPAYFDGRL
QKGDQILAVDNIIFNNVTHQ
FAVQTLKNTGERASLLYMKN
PHP--ELPLDGRQLD-----
---------ESDRSRSLQTF
ETIGGGITS-----------
---PTAADSHSIGGGFSSTQ
QLKQPQFD------------
--------------------
--------------------
--------------------
----VPRLVRLRKLDTG--L
GFNIVGGENEEPIYISHILP
GGAADLNGNIKKGDVLLRVN
DVDLSRATHAQAAQTLKAIP
LYSEVQLLLKYRPIDFQNFE
QKLERLKAEMILMQQQQLQQ
QPYIQQQQQ------QTDFY
VRALFDNEPSRD---TGLPH
RSLSFRYGDILHVLNATDDD
WWTARRVMDNLSGEEGPEGI
IPSRKR------VEKRERQR
RKQVNFNAGSQSLGRNSTTS
GASAAGLGGMEGRRGSRSQL
SFSRKFPFVKSTEKLNEYNS
DGAERRYRRLREKASATNYP
STSTADPSYIVSDSEANQNT
RSRRNKRVEENEERSKEAQQ
KIKKRHSQHWNYALVDEPIH
SYKIVQMKQISYIRPVIILG
ALKDRINDELVTQNPERFSS
CVP--------HTSRPVRDG
EVNGRDYYFVT-KAEMERDI
KNNLFIEAGQFQNNLYGTSI
AAVREVADSGR----HCILD
V-------------------
---------SGNAIRRLQ--
--------------DAARIY
PISIFV------------KP
FSYQQ--LR---------DW
SDQQLTDEDALKQYERCQRQ
EQNFGDLFTSIIT-GQTADE
IYARVLRIINEHSSNDIWVP
TNEQLP--------------
--------------------
--------------------
>C25F6.2a_wormpep204.longest_isoform.pep_
--------------------
--MSHES---SEKAHKAIEN
VEDYCQTLTRHGNEELRTNL
ERVITTFKSNLMHSLLDIHD
LYEQTLLSER----------
--------------------
--------------------
--------------------
----KSDAEKNMEVRR----
-----------------VIE
RLEGGPHSYNSRPAATTSTS
N-------------------
--------------------
--------------------
------------YNLSSTTP
LISDLRDRGGFSYLNGGGLG
NGLGNGLGNGLLSSPYNSSS
THYLHERQRQTSHDG-----
-------------TWRETTT
RTVDTPSGLERRVVEHTG--
---------------VIDDH
GRKWELENIVLEKG-HTGLG
FSITGGMDQPTEDGDTSIYV
TNIIEGGAALADGRMRKNDI
ITAVNNTN-------CENVK
HEVAVNALKSSGNVVSLSLK
RRKDEAFLPIGG--------
---NFGGSTSYLRSGVTPSV
SAGNLQHAIHSPSAPIHPPP
PPPVHHGSLSQLSVGQYRST
RPNTSVIDLVKGA------R
GLGFSIAGGQGNEHVKGDT-
-DIYVTKIIEEGAAELDGRL
RVGDKILEVDHHSLINTTHE
NAVNVLKNTGNRVRLLIQQG
TGAIFNDSASQQFMP-----
----------TTPILRPSSV
QDYNRS--------------
---QMGSQSHLSYGGPLNTS
YSSQAPIAIP----------
--------------------
--------------------
--------------------
---LEPRPVQLVKGQNG--L
GFNIVGGEDNEPIYISFVLP
GGVADLSGNVKTGDVLLEVN
GVVLRNATHKEAAEALRNA-
-GNPVYLTLQYRPQEYQIFE
SKIEKLRNDVIAQSRMGTLS
---------------RKSEY
VRALFDYDPSREN--SVAPH
RSMGFNYGDILHIINSSDDE
WWTARKVHE--NGEETAEGV
IPSKKR------VEKRERLR
RKQVNFNSGSQSLGRNSSTT
GLENRRG--------SRSQL
SFSRKFPFVKSTDRLNDLNE
ESS-----------------
---NVAEEPVWSYQAVEQQ-
--------------------
--------------------
--------AINYVRPVIILG
ALKDRINDELVNRDPSKFSS
CVP--------HTSRPPREG
EVNGRDYYFVN-KHNMEEDV
KNNLFIEAGQFQNNLYGTSI
QSVRDVANQGR----HCILD
V-------------------
---------SGNAIRRLQ--
--------------SNANIQ
PISIFI------------KP
SSAQQ--ILELDSQLATNRQ
DDRAMSGEEAQAQYSRCHRI
EQTFGDLFTQEISNVHSAND
VLSKVYSIISRESQTPIWVP
RH------------------
--------------------
--------------------
>Smp_170290_Smansoni.v4h.longest_isoform.pep_
---MYHINLDNSQKSYSLQP
TQTSPYHDQHVVNLDKSWKH
VESDLKYEYQLSNSLHNVNQ
PPSFENKSDNRLKRNTDTEF
RTENPLFTDD----------
--------------------
---RSNKKLYDIKLSPDIPV
AKPRQKRLKRPKSTLTHEFD
ASLSRKLDESTCSNDLLSIH
DDIPPN---------NLEND
EFNDGQWALLSRLPVTMEVI
IEK-----------------
--------------------
-------SSKGFGFSIAGGH
DNTLGPDDNDTDIYVTRVNP
GGPADHESGLQFGDRILSVN
GISLIGATHNEAVKALQLAG
SKLKLIVERKAELAISEQYS
LMSCSSSYSHPKPLINPTKQ
IMKTSPKTVQPSNHQPSSSN
QSLN--AHNIESLASTSTGS
AGGVKSIECGASITTTSLIS
GSLFDHRDSKHTLNSTITTS
TNKLPHQSTSVHVSPSMTGV
IVEPKHQRSGNVHKPSHDLN
NATTQNNQKGSQTSIRQTSN
GSRLSRRGVACAGFPAFSWC
SGLQRVTAGCALLGRGHHSL
QGSSKNSSQQKLTGNTKSQK
SIQSNEFTNLGTRPTPPPKP
GPLIVEVFLTRGT-----KS
GLGFSITGGIGNETINGDS-
-GIFVTKLTPGGVAETDGRI
RIGDRIVQVNDVPLIDVTHE
QAVRVLKQAGDQVRLILVKH
VNNYSSRQTSSTDLS-----
NEKYHKSQLTKTVTTTNNPC
FGSTGQELLENRMVGIMSNL
LNEWPNARLVTLYRSGRKRI
NSMSRNQTD-----------
--------------------
--------------------
--------------------
---NSDIIQRGYSSNSGRNL
GLNIVGGDGSEATFISHIQP
DKPAGLSKRILVGDRLLTVN
GIDVAKYGHEKAAAALRDAR
--DRVDLLLVYSPEEHIDKK
RQKHRQQKQRRQLTNEAPGE
EGTHEESDANELSKYPDVLL
LRCQVDYDPMKENHHQTIPK
KVFTLKSGDLVHVINTIDPE
WWQARRFDPEINEPTGPIGL
IPSRLR------LERKERTR
TRHVNFMARNVDLTVAVLFL
FPLIDRS-------------
--------------------
----------------ESSR
RRHRDHQHHPLSYIAVTPV-
--------------------
--------------------
--------HLSFARPVVILG
YMKDRIADELLCEFPDLFGT
AIP--------YTTRPRRSN
EVEGRDYHFVISREIMVADI
AAHKYLEAGEYNGNLYGTHL
DSVFEVSELGL----HCLLD
VG------------------
----------GPALKRL---
--------------ESAGLP
AIAILVLP--------ETMP
TDETDKN-----------DD
VYDGNDDDGSFPLLNEQRKQ
KKLKLKKCSSVES--AAFKN
LQSKLGRLLEHFTSFLTGMC
RRFL----------------
--------------------
--------------------
>Sjc_0034200_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
------------------MY
HINLDDARKPYLIQPTRLSH
NEEQMVDLDK----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------SWKHIES
GLKDCYQMSTSLHN------
--------------------
--------------------
--------------------
--VNQLSSLENSPVDR----
---------------AKNNV
NAKFRTKNLIYMHD---KFN
QKLYDAKLSPNIPVAKPRQK
RLKRPKSTSTHDSDVSLSRK
VNESTCSNE------RLSIR
NDAASSSLLMNDEFNDRQ--
RALLSR--------------
--------------------
--------------------
--------------------
LPITMEVIVEKSS------K
GFGFSIAGGHDNTKSSDEND
MDIYVTRVNRGGPADHESGL
QFGDRILSVNGISLIGATHN
EAVKALQLAGSRLKLIVERK
A-------------------
-----------ELAVSEQHS
LMSCS---------------
----------SSYSHPKPQM
NHIKQITK------------
--------------------
--------------------
--------------------
---LSPTTVQLSSHHAS---
--SSNPSLNAQNIESTVSVS
TGSASGVKSTECGVSTTSTS
LISGSLFDHKDSKQTLIST-
--TMSTNKLPYKSKNVPVSP
SMPGNIAELKCRKSNDAQNF
PDDFNN--------------
VSMEINLKGSQTS--VGQSN
TGSRMSRRGVACAGFPAFSW
CSGLQRVTAGCASLGRGHHS
LQNSSKGSSQQKLNKIAKSQ
R-------------------
--------------------
--------------------
--------------------
--FFQSNELGARPTPAP---
--------------------
--------------------
-----------KPGPLVVEV
LLTRGMKSGLGFSITGGVG-
------------------NE
TINGDSGIFITKLTPGGVAE
TDG---------RIRIGDRI
VQVNEVP----------LID
VT------------------
------HEQAVRVLK-----
--------------QAGDQV
RIVLVK--------------
--------------------
--HTNSHSPLQTSSTDRCKF
EMKNLDMDTTAAPENKHLEE
ITETNHNQS-----------
--------------------
--------------------
--------------------
>Smp_146240_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MNVFHSSNFVP----
--------------------
----NSKHILPTTS-----D
LPLNG--TNTCISDNSQNIM
TRLNNSTDSYTNNSLSVPFC
NSPTELFTN------VSSSC
PPRLTTTPKKTMYVRALFDY
DP------------------
--------------------
--------------------
--------------------
--------------------
----NLDTGLPSRGLPFQHG
DILHVVNASDREWWQAKRIS
LVSDFENATHGNSMHSTTDN
TNNNTINSNTQTSALLSSTN
G-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------LG------
-----------------IIP
SCQRIERRQRTRLKRVNFVG
KVTVIGSTPYPHTTTINNAK
DSNTLSCVSNSGIINQSPWD
IGNNGFTTNNNNNGTTTTTY
N----------------NMS
VDAGISSNSSET-----LRN
NSLDMNIR------------
-----------NSTPMDMPI
VSNSTG--------------
--------------------
--------------------
--------------------
--------------------
---TDRHPVIRSYDLVVPVT
--------------------
--------------------
---------ISMARPLIFFG
PLKDRIIDELLLHDS-QFTT
CIL--------HTTRPQRSN
ERNGVDYYFIPSKSIMEEDI
KQGKYIEVNRFQDHYYGTSL
ESVRSILQSGR----ICILD
VG------------------
----------LDAAKYL---
--------------EEVGLF
PITILL------------KP
KSVIH--LR----------S
LQRRLTEDQAKRSMEQIQNI
EDENWRFLSAIIT-YENFDN
VLLSVKNYVQLHSGPVIWVP
SALSTLPGVQCLT-------
--------------------
--------------------
>Sjc_0011120_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----MDILCSSNSDS----
--------------------
----VPKHILAESG-----D
IQLNG-ISTTNQSNTSRSIM
KQLNNPADSYANNSPSTPCC
DSQSELSSN------VSSFT
PPRLTTTTKKTMHVRALFDY
DPNSD---------------
--------------------
--------------------
--------------------
--------------------
-------TGLPSRGLPFHHG
DILHVVNASDREWWQAKQIS
SISDFNNTTHVSSMHQSANN
NNIDSNSTQAPTTMSSSTGL
G-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------IIP
SCHRIERRLRTRLKRVNFVG
KVTVIGATPYPHTSINNNH-
----ISSFTNSGIINHSPWD
NDHNGSITNSKDNNNKILID
ANISSN---------SNDAL
RINSFDTHIKNSNVLLNMPT
VSSLNSSNVYASKKKRSGSL
TRNLLKCFSYRSIKNDSVGL
VSVTRTG------------S
LDAVS---------------
--------------------
--------------------
--------------------
---QNRYPIIRSYDLVVPIT
--------------------
--------------------
---------ISIARPLIFFG
PLKDRVIDELLLQDS-KYTT
CIL--------HTSRPQRPN
ERNGVDYYFVSSKSVMEEDI
QLGKYIEVDRFQDHYYATSL
ESVRSMLQSGR----ICILD
VG------------------
----------LDAAKYL---
--------------EEIGLF
PITILL------------KP
KSVTH--LR----------T
LQRRLTDDQAKRSMEQIQSI
EDENWRFLSAIIT-YESFDS
VLVSVRNFVQLHSGPVIWVT
STLSNLPGVHQCLNNSGTPI
ISYHQQQQQSLTNGITNDIT
SALQSSSIHSVNSTQSKHLS
