>TS_TRISPI_Contig21.SNAP.123_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
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--------------------
--------------------
--------------------
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--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MGVYGDVQRVK-
ILCYNKTVALIQYTEPCQAQ
QAIHNLDGVCLWGKPMHVSL
SKHTSVQLLKE--GQSDYGL
T-KDYSNSTL---HRFKTPG
SKNYTNIYPPSFRLHLSNIP
HSVSGEFIKNIFEQAGF-EV
KYFRFFATNRKM----ATVH
LESLEQAVEALIKMHNYPL-
---TENGN------------
----------LRVAFSKPEI
---------
>D2089.4a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MTKRGPDDLQLSLR
NGVGGASTTAPGVAAAAYYA
NVMTADSEPKKAKLDPTLYS
SQFYTPAMHHGLMTADAS--
--TVAAVTAAAN--------
ATTAQLLTGN----------
---PITQIQGIQLS------
------------TLPQCNST
--------------------
--------------------
--SAVTSIPVSKVVHVRNIP
PDLVDVELMQLCIQYGPVSN
YMMLKGKS------------
-----------------QAF
VEYEEEASAAAFVSGMTAVP
IQIRGRTLFAQYSTHRELKF
DKNKAISDTESVANGSVSNF
EVGTQ---------------
---QQP----------NSVL
RTIIENMM-FPVSLDVLYQL
FTRY----------------
---GKVLRIITFNKNNTFQA
LVQMSEANSAQLAKQ-----
--------------------
--GLENQNVYNGCCTLRIDY
SKLST-LNVKYNNDKSRDYT
NPNLPAGEM-----TLEQ--
--------------------
TIAMSIPGLQNLIPANPYNF
AFG---ANPATTFLTTQLAA
STAAAAAVN-----------
----DSANAAALAPYLNPLG
LTSANLAPSISSMRFPMINL
TP------------------
--------VILVSNLHEMKV
TTDALFTLFGVYGDVMRVK-
ILYNKKDNALIQYSEPQQAQ
LALTHLDKVKWHDRLIRVAP
SKHTNVQMPKE--GQPDAGL
T-RDYAHSTL---HRFKKPG
SKNYLNIYPPCATLHLSNIP
TSVSEEKLKEMFAEAGF-AV
KAFKFFPKDHKM----ALCQ
LEDIETAIDALIAMHNHKL-
---AENAH------------
----------LRVSFSKSGI
---------
>Smp_036590.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
NGNGHAPMET----------
--------------------
---------------DTNEN
--------------------
------------KKSR----
--IEYVETVPSKVVHIRNMP
DDATEHEIALLGIPFGLLEN
MVLSKKAN------------
-----------------QAL
LEMQCLESAIMMVSYYREYQ
VTLRGRNLVMQYSKHQHLEL
HSENSSIGNAIQNANCIVQQ
DLSGAN--------------
---SGMP---------TTVL
RVVVDNIMGQQINHTILHKI
FYRY----------------
---GKILRIVTYLKNNQYHG
LVEFGNHIHAFVAML-----
--------------------
--HLNGQNIYTGCCSLRVQF
SKNRGPLEVRQESDRCRDYL
NNPLTEEELMSLRRPTAGSE
RHHNSNPGHVSSNFQNSVVT
NMAHQGIHLPVGMIAPPNTS
SMGINELTAQLAALAQQSGL
ALTPAAVAATASFMALTSQN
SGPGTQSMSGTPNLSTILAA
LQGGAVQTGVLPHMSGGNAS
VMGSVQTPVSSHVTPVGVRS
PPNNNGSTVLIVSNLNEDRV
YPDALFTLFGVYGDVTRVK-
IMFNKKDTALIQFNDPHQAL
TALQFLNGQRLWDKPMKIAV
SRHNIVQLPKE---DTENGL
T-KDYTNSLL---HRFRKPN
SKNFQNIYPPSHVLHLSNIP
PSVTENDIRVLFATKGF-EV
TGFRFMKDNKMA-----LVQ
LETVDLAIQSLIELHNSQLT
----ENSH------------
----------LRISFSKSAV
---------
>Sjc_0208600_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MTAMS------------
TSAYTALMSS-----KRKRD
EANGFIMNGNGHAP------
------------METDTNEN
--------------------
------------KKSR----
--IEYVETVPSKVVHIRNMP
DDATEHEIALLGIPFGLLEN
MVLSKKAN------------
-----------------QAL
LEMQCLESAIMMVSYYREYQ
VTLRGRTLVMQYSKHQHLEL
HSENTSIGNAIQNANCIVQQ
DLSGAN--------------
---SGMP---------TTVL
RVVVDNIMGQQINHTILHKI
FYRY----------------
---GKILRIVTYLKNNQYHG
LVEFGNHIHAFVAML-----
--------------------
--HLNGQNIYTGCCSLRVQF
SKNRGPLEVRQESEKCRDYL
NNPLTEEELLSLRRPTAGG-
GHHNNNPGHNSSNFQNSVVP
NMTHQGIHLPVGMIAPPNAN
NMGINELTAQLAALAQQSGL
ALTPAAAAATASFMALTSQT
SGPGTQSMSGTPNLSAILAA
LQGGAVQTGVLPHISGGNAG
VMGSVQSPVSTHVTPVGVRP
PPNNNGSTVLIVSNLNEDRV
YPDALFTLFGVYGDVTRVK-
IMFNKKDTALIQFTDPHQAL
TALQFLNGQRLWDKPMKIAV
SRHNIVQLPKE---DTENGL
T-KDYTNSLL---HRFRKPN
SKNFQNIYPPSHVLHLSNIP
PSVTENDIRVLFATKGF-EV
TGFRFMKDNKMA-----LVQ
LETVDLAIQSLIELHNSQLT
----ENSH------------
----------LRISFSKSAV
---------
>Sjc_0099930_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MDLEIVDN
--------------------
------------KKSR----
--VDRLEASPSRVIHIRNMP
ADATENEIALFAIPFGLLKN
MVLSKRNN------------
-----------------QAL
IEMHVLEESVQLVAHYLKYP
VTLHGKHLIFQFSTHSHLEL
ISENDAIVNAIKNANRVVQQ
DLPGAQ--------------
---TGVP---------NTVL
HVVIDNIMGQQINHVILYKI
FHRF----------------
---GIILRVLIFLRNNQYRC
LLEFQDHIQAFVAML-----
--------------------
--LLNGQNIYTGCCSLQVEF
WKARGPLEVRRENDKCRDYT
VSPLTEAELNSLQALPSGVS
ASTNN----STINTIPQPTI
GQNISLGNPTTAFTAIPQAS
ASGINDLAIQLTLLAQQSGL
ALTPAAAAATAS--------
-FMALTAQSGNPAINQAPAT
ILNAAALQSPRTALTTVQNP
TQLLPNIINQSIPNMG----
--QTATSTVLIVSNLNEEKV
YPDALFTLFGVYGDVTRVK-
IMFNKKSTALVQFSDPQQAL
TALYYLNGQPLYGRPLKISV
SRFNIVQLPKE---DTDVGL
T-KDYTNSPL---HRFRKPN
SKNFSNIYAPNHVLHLSNIP
SDITEEEVRMIFETKGY-HV
TDFKFLLKDKKM----ALIQ
LENVDMAIQAMIDLHNCQLT
----ENSH------------
----------LRISFSKTAI
---------
>Smp_138050.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------MVPIRK
EFLNLKMLVGQPSVGNTSLF
EIYDTGRRDAMFG-------
--VLCPSSMPN---------
KRKRDLSVPSINLHRNGHLS
--------------------
------------MDLETVDT
--------------------
------------KKSR----
--VDRLEASPSRVIHIRNMP
GDATENEIALFAIPFGLLKN
MVLSKRNN------------
-----------------QAL
IEMHVLEEAVQLVAHYLKYP
VTLHGKHLIFQFSTHSHLEL
ISENDAIVNAIKNANRVVQQ
DLPGAQ--------------
---TGVP---------NTVL
HVVIDNIMGQQINHVILYKI
FHRF----------------
---GTILRVLIFLRNNQYRC
LLEFQNHIQAFVAML-----
--------------------
--LLNGQNIYTGCCSLQVEF
WKARGPLEVRRENDKCRDYT
ISPLTDDELNSLQALPGGVT
ASTNN----STINSISQPSI
GQNIPLGNPTAAFTAVPQAA
ASGINDLAIQLTLLAQQSGL
ALTPAAAAATAS--------
-FMALTAQGGNSAINPTPGT
VLNAASLQGPRAALPTVQNQ
TQLLPNLINQSVSNLG----
--QTGASTVLIVSNLNEEKV
YPDALFTLFGVYGDVTRVK-
IMFNKKSTALVQFSDPQQAL
TALYHLNGQPLYGKPLKIAV
SRFNIVQLPKE---DNDVGL
T-KDYTNSPL---HRFRKPN
SKNFTNIYAPNHVLHLSNIP
SAITEEEVRMIFETKGY-HV
TDFKFMMKDKKM----ALIQ
LENVDMAIQALIDLHNCQLT
----ENSH------------
----------LRISFSKTAI
---------
>Minc07829_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MLLNN
INCISKSGLESLVKNSALKL
AETNLLQQAAATQGGLVGLQ
TAAAAAVAAAQAHQHQQQQE
IAAKRIRFACPQLIPAVGGG
---AIVSSAPALIP------
-------------IVNHQQL
IQ------------------
--------------------
--PPPNNNTNSIIQQQQQML
STFHHHQQVAAMAAAAAAAA
AANNHNNN------------
---------------LQTSP
KDENGIPINENGRNDRINGT
GGGELINDYARYGDPTKFST
NADGNRLIQTMNGGPISQSY
QDLSSG--------------
--VQNQP---------NSIL
RIIIECML-YPVTLDVLFMI
FSRF----------------
---GKVLRIITFNKNNSFQA
LIQLSESSAAMNAKS-----
--------------------
--SLDGLNIYNGCCTLRIEF
SKLNT-LNVKYNNDKSRDYT
NPNLPSGELTYEQKLQLILQ
N------------------T
QLTGGHHQQQQIGALFPFG-
------AAAAAAVAAQQLAS
NVNTSNG-------------
--TANTQFPFNGQMALQPNN
ELLMGGGQLLSNNLTGIVLN
TAFQSG--------------
---VVNTPVVLVSNLDEATV
TPEQLFILFGVYGDVIRVK-
ILFNKKDNALIQYSDVQQAQ
LAIQHLDKLKWNGRNIRVTA
SKHTLVQMPKE--GQPDAGL
T-KEFTNSSL---HRFKKPG
SKNYMNIYPPCATLHLSNIP
NCMDEDSILEIFKDFKI---
AEFKFFQKDHKM----ALVQ
LEDVETAVAFLVAMHNYKL-
---AENAH------------
----------LRVSFSKKGM
N--------
>Minc12363_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MGKRQKRPQQN
NKNNQLLFSFPTFCQKLLNN
INCISKSGLESLIKNSALKL
AETNLLQQAAATQGGLVGLQ
TAAAAAVAAAQAHQHQQQQE
IAAKRIRFACPQLIPAVGGG
---AIVSSAPALIP------
-------------IVNHQQL
IQ------------------
--------------------
--PPPNNNTNSIIQQQQQML
STFHHHQQVAAMAAAAAAAA
AANNHNNN------------
---------------LQTSP
KDENGIPINENGRNERINGT
GGGELINDYARYGDPTKFST
NPDGNRLIQTLNGGPISQSY
QDLSSG--------------
--VQNQP---------NSIL
RIIIECML-YPVTLDVLFMI
FSRF----------------
---GKVLRIITFNKNNSFQA
LIQLSESSAAMNAKS-----
--------------------
--SLDGLNIYNGCCTLRIEF
SKLNT-LNVKYNNDKSRDYT
NPNLPSGELTYEQKLQLILQ
N------------------T
QLTGGHHQQQQIGALFPFG-
------AAAAAAVAAQQLAS
NVNTSNG-------------
--TANTQFPFNGQMALQPNN
ELLMGGGQLLSNNLTGIVLN
TAFQSG--------------
---VVNTPVVLVSNLDEATV
TPEQLFILFGVYGDVIRVK-
ILFNKKDNALIQYSDIQQAQ
LAIQHLDKLKWNGRNIRVTA
SKHTLVQMPKE--GQPDAGL
T-KEFTNSSL---HRFKKPG
SKNYMNIYPPCATLHLSNIP
NCMDEDSILEIFKDFKI---
AEFKFFQKDHKM----ALVQ
LEDVETAVAFLVAMHNYKL-
---AENAH------------
----------LRVSFSKKGM
N--------
>Mh10g200708_Contig761_36388..40234_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---MLTVKLVR--------A
LNALKLAEANLLQQAAATQG
--------------------
-------------GLVGLQT
--------------------
--------------------
---AAAAAVAAAQAHQHHQQ
QEIAAKRIRFACPQLIPAVG
GTIVSSAP------------
----------------ALIP
IVNHQQLIQPQLNPTNNNTN
SIIQQQQMLSTFHHHQQVAA
MAAAAAAAANNNNNLQTSPK
EENGIN--------------
-------------------I
SINENGRNEQRINGGELNNN
INDYN---------------
-RYGDPTKFATPNNDGNRLV
QTMNGGTISQSYQDLS----
--------------------
----SGVQHQPNSILLRIEF
SKLNT-LNVKYNNDKSRDYT
NPNLPSGEL-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------TYEQ
KLQLILQNTQLTGGHQQIG-
ALFP--------FGAAAAAA
VAAQQLAS---------VNT
SNGTNGQFPFN-------GQ
MALQPNNELL---TGGGQLL
SNNLTGIVLNSAFQSGVNTP
--------------------
-----------------VVL
VSNLDEAVSYLN--------
--------------------
--------------------
---------
>TS_TRISPI_Contig21.SNAP.122_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
NIRVKGKE-----ARCERQV
FVTF----------------
---GTVLRIIIFHKNNNFQA
LIQFLDPISAYAAKM-----
--------------------
--ALDGKPLINGCCTLKIEF
SKLAT-LNVKYNNEKSRDFT
NPNLPSGEVTG---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------QGLRLATV
MP-AVPAFSPLHASLSPSV-
AIANPFAPAAVHIARGGISP
TNLPISAVSFNTPTNTALQH
GRISALQMPQR---------
---------------FSKPP
P-------PLSSVVTVSNLE
AEQTSLNKLITCLVSGR---
-CFEMIRRKSRP----TLCS
LSLVCLAL------------
--------------------
--------------------
---------
>13697.m00027_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MYVCM
HMCVYVPVCAHTYMHVPPTL
STVTLFPHTVATTFDNLNQS
QNFLNPSAFYPLSGYTTTTT
TTTATTTFATTITTTATTTT
TLIPIGEAQTVFLT------
---------------HPNTN
--------------------
--------------------
----ISTPRTYYHQQYSNFQ
PSATAAVAATATFLSGNILK
NTTITGIP------------
-----------------FNT
TNKRKSSTIYGNISDNNSNN
NTKLYRGNHFTTTISESLSS
SSSLSLASSTIPVNSKKTCL
KLDQN---------------
-----------------TFS
GIVSEITPTAAHSFAATCMA
ASPIR---------------
---PIIGQQQQQQQHSPQQQ
FIIASDISNRHQCRN-----
--------------------
----HHHHHHHNHHQHNHPH
SILAKNQHHHHQQQQQQQQQ
HRHLNINEQSSRIAVISSS-
--------------------
SSSSTAFNLHEPTTYNNRRQ
HSSMDQMRHSQQSQTQQSQS
QQDSQEQ-------------
----MASNLLVLGNGSTATG
TAAISASALDISACTQQQPN
S-------------------
-------VLRVIIENMLYPV
TLDVLHQIFSRYGKVLRIIT
FNKNNTFQALVQLSEANSAQ
LARQSLDGQNVYNGCCCLRI
DYSKLATLNVKYNNDKSRDY
TNPNLPSGELTLEQQLSLVS
AATGGQMGPTIASLVQSPFA
FPFGATNPQYAFQQQAAAFP
QADALASPTGISPFLTGLTT
TLASGATSPVTANAAMINAT
AAALRFPHVNVLN-------
-----MSSVVLVSNLNENKV
TPDALFTLF
