>TS_TRISPI_Contig4047.SNAP.1_T_spiralis.071204.pep_
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------------------AR
QLEEEKIDLPQDVEELQLLC
LQLKEELIESRTVKEHLEET
LMSEIVLLKAEIASEKQAKE
EMEAS---------------
--------------------
--------------------
--------------------
----------------LADD
ICHLRSQLDCAQNCLLE---
------RESLYKWKAEAQSQ
FDKHRRRISELEAN------
--------------------
--------------------
--------------------
--------------------
--------------------
---VKELEKDKLQAKELIQE
GQRRAQVLQQELDNCVQVQR
DFVKLSQSLQIQLEKIRQ--
--------------------
--------------------
--------------------
---------SEHERTLFVQV
RWEDDD--------------
--------------------
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-----------
>TS_TRISPI_Contig17.SN.61_T_spiralis.071204.pep_
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------------MNNHGRSL
SCSNLSSLRTEEATDEVKNP
LTETLKDASRLSSALACEMC
ANYEN--GLQQYQETERRLR
QQLTALQNLNERYKSELSAA
RLN-----------------
--HKELD---SSVNEMMENV
SKQLTDLRDIFKAVELRHTE
LEGY----------------
----------------FKGE
TANIRRELSEVIASRRKIED
VYQTLSDQYDHLLGR-----
--------------HRQGAR
QLEEEKIDLPQDVEELQLLC
LQLKEELIESRTVKEHLEET
LMSEIVLLKAEIASEKQAKE
EMEAS---------------
--------------------
--------------------
--------------------
----------------LADD
ICHLRSQLDCAQNCLLE---
------RESLYKWKAEAQSQ
FDKHRRRISELEAN------
--------------------
--------------------
--------------------
--------------------
--------------------
---VKELEKDKLQAKELIQE
GQRRAQVLQQELDNCVQVQR
DFVKLSQSLQIQLEKIRQSE
HERTLFVQVRWEDDDDVLMC
RGCKQLFNR------HRRKL
HCRHCGRIF----CDPCLSR
---------TVSSGPQRKPA
KVCEVCHT------------
--------------------
--------------------
--------------------
LLSKFLVLSSTVLDLFH---
--------------------
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-----------
>F01F1.4_wormpep204.longest_isoform.pep_
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------------MTEPSASE
EVSAGVNAEEPPIPSKKISQ
VSPNPTLQCEMCQNYEVNLT
ALQEN--ERKLKEEVKAAME
LNERYQLDLSNERDYRKELE
KKMN-------------ELS
TNCLN------QVNEAAKAN
AKSEQRLDELSAKHDKS---
--------------------
-------------IEVFTDQ
LNLARDKLQQADDDFVTLGK
KYKKLLGSTRKSAQE-----
--------------------
-LRSEKIDMPADLDQLQFIC
LKNREELIETRAAKEHTEQQ
LQDEITVLRAQILEERAHRE
DQEVT---------------
--------------------
--------------------
--------------------
---------FTAEISRLQSE
LGKINTRMVVASETIAD---
------QDSNIRQIRDLQTT
VGELETQVQQVQ--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------NERAAVEQTAQN
YKQRCTSLQQELDTSEVVQR
DFVKLSQSLQIQLEKIRQSE
QE------VRWQWDDDVDQC
SNCDTSFAR------VKVKP
HCLHCGRIF----CMNCLKD
---------TVPSGPNHRPA
NVCKVCHTLLN---------
--------------------
--------------------
-------------------R
DTKPFFATQDK---------
--------------------
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--------------------
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-----------
>14303.m00139_BMA1.short_headers.longest_isoform.pep_
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------------------MS
MENLDVITSDKMLTNQLSDA
S-------------------
--------------------
--------------------
--------------------
-----------------RDD
STTASVLESTIENHGKWIIQ
KENNQSDAMNQENKISNTIC
EEDVTAISCEMCHNYELNLT
KMQDV--ERNLKEQLSAAQH
LVNRYQNELSGERLYRREME
TKT----------------T
TLCADNE---KEVNIAKNEN
EKCSKQLSAVDERCIKLIR-
--------------------
---------------EQRNN
IGRLKERLNIMNKDMHNLSS
RYLKLLGANRKCSTE-----
--------------------
-MRDQTIELPQDVDQLQFLC
LQLREXLIETRAAKEHAEVV
LRDEITTLEAQRKEDEMEKR
RIEDA---------------
--------------------
--------------------
--------------------
---------YTERVNGVSEE
LGFARSQLDSMKDASSK---
------VEEMNKRMTEYRKV
IEDLEKQLQSVQ--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------KERTDLEMSVAL
YKQKCAALQQELDTSETVQK
DFVKLSQNLQIELEKIRQAE
QEVR------WQFDEDVHAC
NQCQSNFSK------NRVKF
HCYHCGKIF----CSICLSA
---------TIPSGPHRRPA
RVCQVCHTLLS---------
--------------------
--------------------
-------------------R
DSAPFFSHNLAAT-------
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-----------
>Sjc_0045850_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
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-------------MLSHNLD
YKQSSVRESFLDNTAGNFTR
PPLPAFISDILDQLTDNELK
NRLGSAFRDKESELLE----
--------------------
-------------------S
QSAYKHAQNEVIE---SKKQ
LAKLELELANIKSAAEMLMI
EHDDALSCLKKQYDEELSSL
LIASEQGYLHQFVDDEHS--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------NNPTPYSATTE
NETCSTPKSSFITVEKK---
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------SAQ
SLANQAFDKVERLIRRVSHH
KALTNN--------------
--------------------
--------------------
--------------------
--------------------
----------FILNKTGVSS
FWANNPEVCSNKEEEQTEDG
N-------------------
--------------------
-------DDDDYVRSIVEPY
ETEISRLQQILVNAAIPFTA
TLHPNSLNRKLTDEKIANKI
LHDSNTKIDISGNDDDCNNI
NVVDDGSSLNNFIDRSCDEK
TENHSVHESSFSNNDHLDIN
ENYEN--IQPVIVKQSICDH
SLSFEGQSSITDTVEKLEKK
LATVTNELNLKTQALKVSTD
RQLELENALKTQVSEQISKT
EKISTLANQLAQRLDGLLLN
YKAYR---------------
--------------ETTERE
ISNLLVERKIADTNLQIIRS
HYDSLVGRRSQAAAE-----
--------------------
-LSRQPIQLPNEKDELEHLA
LKLYEENLSFREARDHLEER
LNKESEAHKEQLANEQQERL
NFESS---------------
--------------------
--------------------
--------------------
----------------ALQE
LEDARQRLANLSNIATE---
------RDNESILRQKYEEE
LKSSKSKLNEVQAKY-----
--------------------
--------------------
--------------------
--------------------
--------------------
----ELTETSLIEAQKRIVD
LQDQIVRLQNDLDNIESVQA
DFVRLSQNLQVQLERLRQQD
HEVR------WINPDDVTAC
FACNSSFSTGLGSA-NAKKI
NCRHCGKVH----CSNCMKN
---------SVPAGPFGHPA
VVCDVCHTLLN---------
--------------------
--------------------
-------------------K
NIAPYFSTSLSNNNNPKDQL
LSSTKRYSLSSPTQSLTNLT
TRPS----------------
--------------------
--------------------
--------------------
--------------------
--------------------
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-----------
>Smp_126170_Smansoni.v4h.longest_isoform.pep_
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-------------MLSPNSN
HEKTPVCENFPSNTTDNFIK
PSLPPFISNILDQLTDNELK
CRLESVLLDRESGLLE----
--------------------
-------------------S
QSACKDAQNEVVE---SRKQ
LVKLELELANIKSAAEMLMT
EHEDALLTLKKQYDEELSSL
LIASEQGYLHQFIDGQCS--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------NDSSPTE
NENCPTSKSSLLITEKK---
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------SAQ
SLANQALDKVEKLVRRVGHK
ALTNN---------------
--------------------
--------------------
--------------------
--------------------
----------FILNKSTVSS
FWPNHDIGSNKEEDNDDDYV
R-------------------
--------------------
-AIVEPYETEITRLQQILIN
ASIPFTRSTLHPNSATSYKL
SEEKIVNKSFHNSNMKIEVS
GNNIDNNNNDNNNNNNSNTD
NVVDAGGNPSNLIKRSCDQI
AEKHSVHKSPDNCNDHVNSD
DDDDDGNTQSTVVTQSICDH
STSFEGQIYLTDTMKNLQKQ
LYTVKNELDLKNHALKVATN
RQLELENTLKTQVSEQTSKI
EKISTISNQLGQRLDDLMLN
YKSYR---------------
--------------ETTEKE
ISTLLVERKIASSNLEILRS
HYDALVGRRSQAAIE-----
--------------------
-LSRQPIQLPNEKDELEHLA
LKLYEENLSFREARDHLEEC
LKKETETHREQLANEQQERI
NFESS---------------
--------------------
--------------------
--------------------
----------------ILRE
LEEARRRLADFVNITTE---
------RDNETVLRQKCEDE
LKISKSKLNELQAKY-----
--------------------
--------------------
--------------------
--------------------
--------------------
----ELTETNLTEAQKRIID
LQDQVIRLQNDLDNVESVQA
DFVRLSQNLQVQLERLRQQD
QEVR------WISPDDVTNC
FSCNSPFPMGISNNNSSKKI
NCRHCGKVH----CSNCTKN
---------TMPAGPFGHPA
VVCDIKLQ------------
--------------------
--------------------
--------------------
NRPNILERLAQGII------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------
>Minc01144_MiV1A1.short_header.longest_isoform_
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--------MTETGGGDSVES
ASVYANSVCEMCGNYEVQLQ
TIQSS---------QDTLRE
KLAAAKELYEKYGKELTEER
HYR-------------KELE
IKFAALN------EETEGKI
QQCITNTEDFEQRIVLLSKK
QEAD----------------
-------------LSVLESQ
LELARNRQKELQEQLVLLNE
RYEKLLHLKSQCAEE-----
--------------------
-MREQQIELPQTVEELQFLA
LQLREELITERAAREHERRE
LNDELAMARQQLVELEICPR
ENEE----------------
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>Minc14626_MiV1A1.short_header.longest_isoform_
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--------MTETGGGDSVES
ASVYANSVCEMCGNYEVQLQ
TIQSS---------QDTLRE
KLAAAKELYEKYGKELTEER
HYR-------------KELE
IKFAALN------EETEGKI
QQCITNTEDFEQRIVLLSKK
QEAD----------------
-------------LSVLESQ
LELARNRQKELQEQLVMLNE
RYEKLLHLKSQCAEE-----
--------------------
-MREQQIELPQTVEELQFLA
LQLREELITERAAREHERRE
LNDELAMARQQLVELEICPR
ENEE----------------
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>Mh10g200708_Contig256_50226..53171_M_hapla.pep_
--------------------
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--------------------
-MDDRPSSSKDPNMEWMYGG
TKSIVNREDYLLGKKIDKNF
ELYSDVVVKDKDEEGRDNFF
KQKLLQNGSGSHNQKISALD
VRTVRN--------------
-------------------E
DPLVALKFQEEQRRRQMLDN
PLLKLKAQRILQKEFEKQMK
KGEKKKKKHKKSKRSSFSSD
EEIHSKQRRVDEKERHHR--
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------HSS
EERSGSSRGRERREDSRKRN
ESHHHRDSSSRSSVDKR---
--------------------
--------------------
--------------------
--------------------
--------------------
----------------TDSG
SYSQRGEEQSKEKTQSRPKL
SAAEIEERRK----------
--------------------
--------------------
--------------------
--------------------
---------AMLQNASWRDE
MRESNFKKTIEQLQKEENEA
N-------------------
--------------------
--------------------
--------------------
--------------------
------NVPNFIRPVMDSAN
SSLEKRLQIMTDTGGDSAES
GSAYANSVCEMCGNYEIQLQ
SIQSS---------QDTLRE
QLAAAKELYEKYGKELTEER
HYR-------------KELE
IRFAALN------EETEGKI
QQCISNTEDFEQRIVLLSKK
QEAD----------------
-------------LSVLESQ
LELARNRQKELQEQLVLLNE
RYEKLLHLKSQCAEE-----
--------------------
-MREQQIELPQTVEELQFLA
LQLREELIIERAAREHERRE
LNDELTMARQQLVELEICPR
ENEE----------------
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-----------
