>14285.m00051_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
KGDYDVADITSDN-------
--------------------
--------------------
----GLDDVSIR--------
---------------KAFES
GVDLRQYSAKLQEQLQSAHL
LAVKDCI-------------
--------------------
----DQAEKLAELHEEITAC
DDAFA---------------
--------------------
---------------QLEGM
LRSFQSELGT---ISSDMKR
LQQQSVDISQQLQNRQKIRG
ELSQFVDDMVVSQNMIQTIV
ERDVGEREFLEQLHELQHKL
QFLKAQEFRDVKATSDVHD-
------------------AM
AKIRKWLLLKISSFKRPLTN
YQIPQGALLKNRFFYEFLLA
NDRHLAREIRDEYVDVISKM
FFTYFKTYASRLFRLLLADV
ANKDDLLG--AENTMKTTSL
--------------FSLKSQ
LRNRATVFSLGNRDS-----
--------LLS-SDLMSPLI
VPHVAQQANERKSCEEHISS
N-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------YD-----------A
VSLYICIGLCSK----YKEL
MIERGVPALESY--------
--WETLNCALWHRFDVVMGL
HN----------------SS
LRDLDAHKMQL--QPDTH--
--------------PHY---
--------------------
--------------------
-------------------I
IRRYAEFTCALLVCSQTLMQ
Q-------------------
-------------------I
DPKLQLYLTKQQAEIENFLT
HISEQLTTRVQRLVCLINNY
DLILNVLE-----ERITFDS
KEKSSFWELKQNRINEYVEL
MLRPHFGDLMSFVNECEPLI
EQGH----------KQLLIR
YSDNVAKIVRSFCANWKKSI
DAINNEIVRSFANFKNGTNI
LQ------------------
-----ATFTQIIQYYHRFSK
VLSHEVFAENAVLKELVNIH
HIMVEIKKYKPVY-
>F08C6.3_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
PRTRVNLQKSEANDRSFTIS
S-------------------
--------------------
-LEFCLSQLRKADPN-----
------------LVKKAIAS
GDGLTESKNDVSTRLSEAHR
YSVQQCLD------------
--------------------
-----NSEQLAQLHNQLVHC
DNVFE---------------
--------------------
---------------RLQAT
LYSFQDNLGS---IGQDMKN
LQLQSHHIHQELENRQKVRV
ELSQFVDDIAVSQTMMKTIN
DTDANDRGFLEALHELHHKI
TLILQRGNGDAVAVNDTMPI
LEGLKLK-----------AV
VKVREWLLQKMFQFRKPLSN
YQVFQHQLLKCRFFYEFLLH
HDLISAKELQDEYIDTISKM
FFTYFKAYATRLFKLAMKDV
ATKEDALG--SIDFAKPAGL
GAIF----------SSKQHV
VRNKATVFSIGQRHQ-----
--------ILSDDFLGALIV
PHAVTQNHQSVYLTIELAMA
RAMSVVLKSCEEQIALS---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------WD-----------A
ISLHLCICLCDK----FTEV
LAEREVPEVSDY--------
--WNTVTSFLWTRLNLVMSQ
H----------------YES
VKSVDLKKLMHSGSLDAR--
--------------PHF---
--------------------
--------------------
-------------------I
VRRYAELTSAHLMIAKASGK
E-------------------
-------------------M
GAKMEAVLENSEDSIEQLLT
RMSAMQQTQKNKHVFLINNY
DLILSIID-----NEESKHT
KIYAIVHELEQKSIDDFVEE
MLEPHIGYMIKFVNECESLI
VQGH----------TQLLVR
YNDKVGTVVANFNAKWRPAV
DSINSECIQLFTNFSLGTTI
LQ------------------
-----TIFTKYVQYINRFTK
ILSHDVFAKNPVCSQLVNVH
QVMLEIKRFKPAY-
>Smp_194590_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
NADESLKTEIEEI-------
--------------------
--------------------
--------------------
----------------ALKS
GIDVRDYAAQVESELTKIEE
SLIKTYIT------------
--------------------
-----VSPEVASLHNQIISC
DAILE---------------
--------------------
---------------RIENI
LTNFHEDLGA---ISTEIQD
LQSKSLQMNTRLQNRQVVRS
NLSQFLSDTAIPEELIRHII
YTPVTEQEFLENLHELNHKM
NFSLEQSMVDYKSFNDVSVL
LKKLRIK-----------AV
AKIREFLLGKIYSLRKPLTN
YQVPQNQMLKFRFYNSFLLA
HDREIAKEVRVEYINTMSKV
YYAYFKAYGGKLTKLQLDTT
YEKDDLLGKNPDKYNSSSST
SSLM----------FNSITN
VTNNSTVSVSSNSGTRVGLF
GLSDRALRVLSKSNLESAII
LPHVASNVDAKYPIEVLFRS
IHYALLDTACREYYFLSDFF
LLSTETESVDSPPSCDQSAP
NQGRTQSGLALAHLFEQVMS
RSLSWIH-------------
--------------KFTGTF
MIS-----------------
--------------------
---SCSHD-----------A
IGLLICLQLLHA----LLRL
AKERGVPVLDNF--------
--WGKMTETLWVRVTDRLDV
HIASMLQYLDVSSFSTDARD
IMKSNLSTLNVSAPTNTTGN
TTVGLHPKMYALIRPHS---
--------------------
--------------------
-------------------I
ARRYAELAASLHSIGHQFPG
--------------------
--------------------
NPRILSRLAQLQTQFEHVLN
SLAKTFSRPKLAHIFLINNY
DLVISVLT-----EHGAADS
SEVVRCREAVAKHMTSYIDE
ALSPYFGCLISFVRDVEARS
TSESRHQSKNQDELTQNIRS
EEARVTRIVKGFNIDWKNSI
EKIHDEIMMEFANFTLGTQI
FQ------------------
-----GLLAQLIQHYHRFQK
VMTQSPYKNMPIRNQLVNIH
QITNEMKKCKTNFS
>Sjc_0068580_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------MKYFIHIM
YTPVTEQEFLENLHELNHKM
NFALGQSMVDYKSFNDVSVL
LKKLKIK-----------AV
TKIREFLLGKIYALRKPLTN
YQVPQNQLLKFRFYNSFLLA
HDREIAREIKVEYINTMSKV
YYAYFKAYCGKLTKLQLDTT
YEKDDLLGKNPEKYNSASSA
SSVM----------FNSITN
VANNSTMSTPTNSGTRVGLF
GLSDRALRVLSKSNLENTII
LPHVASNVDAKYPIEVLFRS
IHYALLDSVCREYYFLSDFF
HLSAESESNDLPSSPGQNTP
DEVCTQSGVALAHFFEQVMC
RSLNWIQ-------------
--------------KFTETF
IIS-----------------
--------------------
---SCSYD-----------A
IGLLICLQLLHA----FLRL
AKERGVPVLDSF--------
--WGKMTETLWVRVTDRLDV
HIASMLQYLDVSSFSTDARN
LVTSNLSTSNISAPTNTTGT
STSGLHPKIYALIRPHS---
--------------------
--------------------
-------------------I
ARRYAELAASLHSIGHQFPG
TPLFDDSVCKSKSSESSNLQ
HSLHTTSAPQRNNTNLNPGL
DPRILSRLAQLQTQFEHVLN
SLAKTFSRPKLAHIFLINNY
DLVISVLT-----EHGASDS
SEVIRCQDAVAKHTASYIDE
ALSPYFGCLISFVRDVEIRS
TSESLLS-KSQDESAQIIRS
EEARVTRIVKGFNIDWKISI
EKIHDEIMMEFANFTLGDAN
IS------------------
------SLCTFIT-------
--------------------
--------------
>Mh10g200708_Contig30_20004..23751_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
EENKKLEILNDLETTSSDID
ID------------------
--------------------
--------------------
----------DKLLINGIEN
QQDLRDCLANIEVELQQISQ
LTVQDCID------------
--------------------
-----NGDKVADLANEIEEC
DGILEG--------------
--------------------
----------------MENM
LVNFLDDLGK---ISGDMKH
LKEQSVEINQQLNNHQRVRA
ELSQFVDDMVVPHSMIKAIT
EKDVNSTEFLEQLHELQHKL
QFIKTQQFKDAKSVGDVRDV
VENLKYKMS---------DK
ATKFDLLGSDNTCFKQPTTL
SNLPN------------IFT
SSNKTQQ-------------
--------------------
--------------------
------------------QQ
HKGQATVFSLGNRQN-----
---------ALLDDILAPLI
VPNVAQENNETFQFEALFRS
VQYAIVDHCSREYLFLCDFF
LVT-----------------
-------DQSAVDLFTHVMG
RSIALLL-------------
--------------KTLEER
INLN----------------
--------------------
------YD-----------A
ISLFICICFCTK----YRQL
MLQRGVLAIETY--------
--WENVEKMLWDRFEAVMKS
HN----------------ES
IRQLDVRKMT----VDTR--
--------------PHY---
--------------------
--------------------
-------------------V
IRRYAELTSSLLVCSDLAYQ
K-------------------
-------------------I
NSQLIAILSRQQAEIEGLLN
RLATQLKTKKERLVFQINNY
DVILTVLN------------
-----------------VSQ
IHKKIFGE------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------
>Minc10181_MiV1A1.short_header.longest_isoform_
--------------------
--------MVQKLQVFQNIK
DLYYDLVAPELKSSFYTETW
LVGPGDLPSDCDTNFKIHNI
QSIQFSKPFDAIKFDNTKDH
SKWAVSQEIICIGDINRQKS
QSKRGGGTVCMKNKNIAKIY
FSAI----------------
-----GAVECCINETECSPN
NKQGRRGKNKNLQILNNLET
SSSTCDIEIDDKLLINGIEN
TQDLRDCLANIEQELQQIGQ
LTVEDCIN------------
--------------------
-----NGDKIADLASEIEQC
DGILEG--------------
--------------------
----------------MENM
LVNFLGDLGK---ISGDMKH
LKEQSIEINQQLNNHQRVRA
ELSQFVDDMVVPHSMIKIIT
EKDVNSTEFLEQLHELQHKL
QFIKTQQFKDAKSVGDVRDV
VENLKYK-----------AL
EKIREWLLLRISLFRKPLTN
YQIPQNALLKN---------
-----------------SKM
FFTYFKAYVTRLFKLLMSDK
ATKFDLLGKDDTCFKQPTTL
SNLPNIFTSSNKTHQQHHQQ
HKGQATVFSLGNRQN-----
---------ALLDDILAPLI
VPNVAQENNETFQFESLFRS
VQYAIVDHCSREYLFLCDFF
LVT-----------------
-------DQSAVDLFTHVMG
RSITLLL-------------
--------------KTLEER
INLN----------------
--------------------
------YD-----------A
ISLFICICFCTK----YRQL
MISRGVLAIETY--------
--WENVEKMLWDRFEVVMKS
HN----------------ES
IRQLDVRKMT----VDTR--
--------------PHY---
--------------------
--------------------
-------------------V
IRRYAELTSSLLVCSDLAYK
K-------------------
-------------------I
NSQLITILSRQQAEIEGLLN
RLATQLKTKKERLVFQINNY
DVILTVLN------------
---------------GFEPS
SYSS----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------
>Minc16730_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
KSNRFIISSFFLFGFCLLLS
FS------------------
--------------------
--------------------
--------------FFSIFT
GASTYSCKSPTGADVDWFVA
YKLPNSIS------------
--------------------
-----NGTSFLYADSKNGED
WTLSKAN-------------
--------------------
----------------IEDE
TSAIGRTIFQ---IFEAKKA
KTDLIALYNDENPNDGKTDS
GRAHMKG-VVVSSNKNGFWL
VHSVPKFPLSSEEKYLYPES
GKRNGQSFFCLSFSSDALEQ
IENKNLQ-----------ML
NNLETTTTTSSTSCDIEIDD
KLLINGIENTQDLRDCLANI
EQELQQIGQLTVEDCINNGD
KIADLANEIEQCDGILEGME
NMLVNFLG----DLGKISG-
--------------DMKHLK
EQSIEINQQLNNHQR-----
----------VRAELSQFVD
DMVVPHSMIKIITEKDVNST
EFLEQLHELQHKLQFIKTQQ
FK------------------
----------DAKSVGDVRD
VVENLKYK------------
--------------KTLEER
INLN----------------
--------------------
------YD-----------A
ISLFICICFCTK----YRQL
MISRGVLAIETY--------
--WENVEKMLWDRFEVVMKS
HN----------------ES
IRQLDVRKMT----VDTR--
--------------PHY---
--------------------
--------------------
-------------------V
IRRYAELTSSLLVCSDLAYK
K-------------------
-------------------I
NSQLIAILSRQQAEIEGLLN
RLATQLKTKKERLVFQINNY
DVILTVLN------------
----------------DFKK
IIFPPLGFEPST--------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------
>TS_TRISPI_Contig2.c.FG.129_T_spiralis.071204.pep_
MRCNDDDDDYGIVAGCGRTV
STNVVVDHPNEDVVEMLNAN
SMEQWKKDPSAGDVAEIEVT
VQNVNPLAASSEQQDVSNRP
TTTTIGTPLDYVTAMELLTN
DFRFRLYTVFHQRIIFAWLI
ASLIVMFCVLFSNARGLVLF
ALSLGWSSVIGLGTLLCVIF
ERMLEVAKNVEKLGLKLHRR
QHHLPIPTTPSVSSQVDIVA
APTTAQNKHTQRYCRDLIRQ
GINLPVVRFQDQTDDMSITV
KHCKFALCLCQYLEKCHFQK
RRRSLFCWSLCVLFVNFQKV
MSTEKDNPDAGIISDKTTAV
DGELLSEILG----------
--------------------
--------------MQMESM
LTAFQSDLGN---ISNEIQS
LQEQSVKMSVKLKNRQAVRG
ELSQFIDEIVVPEVMIKTII
DEPVSERLFLEQLHELQHKI
AFVKQQAFREALSCVEVEGL
LENLRLK-----------AT
EKTRDFLLKRIYQFRKPMAN
YPVTQGTLLKYRFYFEFILS
NDRYVAKEIRDEYVNTTSKI
FYTYFKTYASRLMKLQLDDV
ATKDDLLG--SDDSTKMVN-
-------------MFSTRPN
VRNRATVFSLGSRMS-----
---------VLKEDLEAPII
VPHAADQNKQK---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------I
IRRYGEFFAALAAVNADLP-
--------------------
--------------------
DEKLQQYLYRLENEVAHLLA
RAMHEFKSIRERTIFLINNY
DLIVSVLM-----EKLPGES
IDSQESSKRLQAYITEYAEL
LLTTHFGSLVNFVYQAESLI
EQGMQ---------------
--------------------
EKLKDNSENIFSTNTVLSPV
AQS-----------------
--------------------
------------------VG
HANVESPGQK----
>TS_TRISPI_Contig494.SNAP.1_T_spiralis.071204.pep_
MRCNDDDNDYGIVAGCGRTM
STNVVVDHPNEDVVEMLNAN
SMEQWKKDPSAGDVAEIEVT
VQNVNPLAASSEQQDVSNRP
TTTTIGTP------------
-------------------L
GRVIIIIVVVIQKLENIFEN
G-------------------
--------------------
-------ITIVVVMPLKLTC
KVLSFTKFDPNHVPRAILSS
KLSITVEDYVTAMELLTNDF
RFRLYTVF------------
--------------------
----HQRIIFAWLIASLIVM
FCVLFSNARG----------
--------------------
--------------LVLFAL
SLGWSSVIGLGTLLCVIFER
MLDQSLSACVATVNRFLVRH
NLLLCVDDRGKFSCHKIAIL
EVAKNVEKLGLKLHRRQHHL
PIPTTPSVSSQVDIVAAPTT
AQNKHTQR---------YCR
DLIRQGINLPVVRFQDQTDD
MSITVKHCKFALCLCQYLEK
CHFQKRR--RSLFCWSLCVL
FVNFQKIMSTEKDNPDAGII
SDKTTAVDG--ELLSEILG-
--------------MGIDLR
EYAKDVQKQLKSVEAD----
---------AIQEFVEQAEN
IATLHNEIRNCDQILNQMES
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MLTAFQSDLGN---------
--------------------
--------------------
--------------------
-------------------I
SNEIQSLQEQSVKMSVKLKN
--------------------
--------------------
RQAVRGELSQFIDEIVVPEV
MIKTIIDEPVSERLFLEQLH
ELQHKIAF------------
-----------VKQQAFREA
LSCVEVEGLLENLRLKSLFT
DSGN----------------
--------------------
----GKDQRFFAQANIPISQ
ADG-----------------
--------------------
-ELSSHAGHVVEIQILFRIY
TFQRPLRGQRDS--
>Sjc_0306680_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MLVFLGLLFCYI
YRVTNSLS------------
--------------------
----CLDDDGQEIDWFVG--
--------------------
--------------------
--------------------
----------------YKLP
FSYDVVFMNPDQRNWELSKY
PITDSGMMKNTFESMFKLIN
KPDSVIGMYNDEIPNVTTTS
GYDQINFWWGHMKGAFAFD-
-------------------N
SDIGFWVIHSIPKLSYSNTS
YVYPKTGRIYGQHFLCLTLE
KKIH----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------
