>Smp_148150_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAHFVLSKK-GPLARIWLA
AHWDKKLTRAHVFETNISSS
VEAILE-------------P
KLKMALRTSGHLLLGVVRIY
SRKAKYLLADCNEAFVKIKM
AFRPGVVDLPDEANREAA-I
AAITLPENIHDFEATIADLN
EIN---MNTIAINQSR-PED
ITMREDF---GEINLG----
-RQDDDFGDSAFDEVSSREI
IREGDKTFGDSIYRGSDHLS
MHHDADFTLNPDQDLDATLI
DVKRGGRLSDAEKPIKSIDS
ITHHDDIGMVDNEFDDDFLA
EPDDDDENFGGRIVHSLFTD
GIFEDPSAQKQLENLTSEIE
SHMVTG-RFDLHHDDITATP
IPTSSNEDLIPNAAA---VS
KPLDAFSTVSTSVNELMTTA
TATTVGMT---ITSETPGFV
APTSLSTDTTTSRVG-LGVT
AMTESTTLIGNESEAFALPP
IEATYTTVG-VEPKRATKRR
RRLIVDEQKSIPSEVMKSQM
-ENTADITTQLDLAPPTKKL
MHWKETGSVDKLFVLPGRAI
PS-RVLQRLFMRNLYTQAVP
DDVTGTGESFQTSNLLSNLS
FSSTTQQQQPLPDQSNMLTN
--SEALQPN-----------
--------------------
TSFDQSIQQQQQQSTDVSIS
EFGET-MKDSMQLPQKLGPI
SEIPEDESGPFATSHGEQSR
PTPATSHGADNNQDDLDDEP
PMHDDLAFMVEPETPYLAPP
SILSEAPPSVMQVDMLALER
ELAAADNEVDNELENVFKND
GRTCDGLLSGSGFPGSEAPL
SVDGLPLETAEERRLEKRSK
VLLRMLRVHQQQYGWNEPLT
LQGLCHGNTKKQAASKFYTI
LLLRKQGAVELAQEVAYSDI
YISRGPNFFRLVET------
------------------
>Sjc_0214660_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAHFVLSKK-GPLARIWLA
AHWDKKLTRAHVFETNISSS
VEAILE-------------P
KLKMALRTSGHLLLGVVRIY
SRKAKYLLADCNEAFVKIKM
AFRPGVVDLPDEANREAA-I
AAITLPENIHDFEATIADLN
EIN---MNTISINQSR-PED
ITMREDF---GEINLG----
-RQDDDFGDSAFDEVSSREI
IRDADKTFGDSIYRGSDHLS
MHHDADFTLNPDHDLDATLI
DVKRGGRLSDSEKQIKSIDS
VAHHDDIGIGDNEFDDDFLA
EPDDDDENFGGRIVHSLFTD
GIFEDPSAQKQLENLTSEIE
SHMVTGGRFDLHHDDATTTP
IPASVSEELLTSDASGTVIS
KPLDAFATVSTSVKEMTTAV
VATASTTTGVVTTSGTVGFV
APTSLPTVTTPASRIGLGVT
TMTESTTLIGNESEAFALPP
IDTTSATG--IEPKRATKRK
RRLIVDEQKSIPSEVMKSQM
-ENTADITTQLDLAPPTKKL
MHWKETGSVDKLFVLPGRTI
PS-RVLQRLFMRNLYTQAVP
DD---SSDSFQTSNLLSGLS
FASTGQQQQPLSDQSNISMS
--SEPAHP------------
--------------------
---NISFDQSVQQHQSGNLS
ISEVSGVKDTMQAPQKLGAI
SEIPEDESAPFASHEQSRIT
P--ATPHGLNNNQDDLDDEP
PIHDDLAFMVEPETPYLAPP
SILSEAPPSVMQVDMLALER
ELIAADNEVDNELHQAFKGD
GLLSGG------FPGSEAPL
SVEGLPFETMEERRLEKRSK
VLLRMLRVHQQQYGWDEPLT
LQGLCHGNTKKQAASKFYTV
LLLRKQGAVELAQEAAYADI
YISRGPNFFRLVET------
------------------
>14529.m00205_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAQFVLSKK-GPLAKIWLA
AHWEKKLSKAQIYETNVQDA
VDEILK-------------P
KVKMALRTTGHLLLGIVRIY
SRKAKYLLADCNEAFLKIKM
AFRPGQVELDEDGQQTAS--
AAINLPEVFHDFDAALPDFN
ELD--MHAQIHINQSR-IDD
ITLKEDL---IPETAD----
-MPFGAEFGGDDFGESSLGL
FSDVNIEEARDRVSYAPEAG
-------------------I
SRSAATLLEESEPGSEKGDA
ISGKPMDVDIDHLGMPMPDD
DFGDFP-------------A
DNMLDEVIFNESELAK----
-------------------S
LDAMEAPGAEHDIP------
--------------------
--------------------
-METEDVAATAIAGLVIPTT
--------AGLANESFTLEP
LDAAAVAVAGIEKPGRPKRK
RRLIVDEQKNISGDEMKGNM
-AEYRDTLQPLDLAPPTRKL
MRLKETGTADKLFAIPGCAH
LR-AQNLLKLYRSHLVYHVY
SASALTGDQIR--------K
DLDMAEHVDDNIEPEG----
--------------------
--------------------
-------------SIVSGLL
EDRMDDFDDVGITAMSPDEN
IGQL----------------
--------------------
--------------ETIPEV
PIAPEEQLISISKDAFTSP-
---EKKKERKSRVERTVDED
ETGVD---------------
--------AEDEHRWTKRTQ
NVLNSISTKIKASSDGKILF
TDLLTKGSTRKTAAQKFSML
LVLKKWQAIDVQQAEPYGEI
IISAGPNITSAVTS------
------------------
>Minc04275_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAQFVLSKK-GPLAKIWLA
AHWEKKLSKTQIYETNVQDA
VAEIIQ-------------P
KVKLSLRTTGHLLLGIVRIY
SRKAKYVLADCNEAFIKLKM
TFKHGSTCDLALRDREDR-M
GSTDIPEVITDFYDNLPEIN
DFDLGPLGEFQANQSR-IDD
ITLREER---PNAYNKGL--
DFVATTDGEGFDDFGEKDNI
RRARSRSIFEEMEEEMEQQ-
------------------RR
ESRNSVAAPGESFLIPRDQS
LLREDGPPQKDKEGFELFNS
DLNDFG--------------
TAEDLDLFFNASDLG-----
-------------------R
ELELNNQAAATPMAP-----
--------------------
--------------------
--------GDDIEDQPMDVG
----EMQQVPNNELSFQLEP
---IEQQP--HHERMRHKRK
RKLIIDEQKSLTGEEMKANM
-ADYSDTLQPLDLAPPTKQL
MRLRENCQLEKILMMPANAE
WILDPEIIRIYQSRLELHAA
DPYDIAESDLR---------
--------------------
--------------------
--------------------
----------------LDLE
LSDTIVEEEIARERPESAPV
EANEN---------------
--------------------
----------------LVPE
PEMEVSQEIPTVPETLTSPP
PVEKKSEKRRARVDKDEEEV
E-------------------
----------EEELFTRRTK
NVLQAIATKIRSNSENKITF
DDLLTKGSTRRTAAQKFYAL
LELKKWQAIEIEQEEPYGPI
EISSGPRLQETMKFPV----
------------------
>Minc11020_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAQFVLSKK-GPLAKIWLA
AHWEKKLSKTQIYETNVQDA
VAEIIQ-------------P
KVKLSLRTTGHLLLGIVRIY
SRKAKYVLADCNEAFIKLKM
TFKHGSTCDLALRDREDR-M
GSTDIPEVITDFYDNLPEIN
DFDLGPLGEFQANQSR-IDD
ITLREER---PNAYNKGL--
DFVATTDGEGFDDFGEKDNI
RRARSRSIFEEMEEEMEQQ-
------------------RR
ESRNSVAAPGESFLIPRDQS
LLREDGPPQKDKEGFELFNS
DLNDFG--------------
TAEDLDLFFNASDLGR----
--------------------
ELELNNQAAATPMAP-----
--------------------
--------------------
--------GDDIEDQPMDVG
----EMQQVPNNELSFQLEP
---IEQQP--HHERMRHKRK
RKLIIDEQKSLTGEEMKANM
-ADYSDTLAPLDLAPPTKQL
MRLRENCQLEKILMMPANAE
WILDPEIIRIYQSRLELHAA
DPYDIAESDLR---------
--------------------
--------------------
--------------------
----------------LDLE
LSDTIVEEEIARVEERPESA
PVEAN---------------
--------------------
--------------ENLVPE
PEMEVSQEISTVPETLTSPP
PVEKKSEKRRARVDKDEEEV
E-------------------
----------EEELFTRRTK
NVLQAIATKIRSNSENKITF
DDLLTKGSTRRTAAQKFYAL
LELKKWQAIEIEQEEPYGAI
EILSGPRLQETMKFPV----
------------------
>Mh10g200708_Contig290_38206..40552_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAQFVLSKK-GPLAKIWLA
AHWEKKLSKTQIYETNVQDA
VAEIIQ-------------P
KVKLSLRTTGHLLLGIVRIY
SRKAKYVLADCNEAFIKLKM
TFKHGSTCDLALRDREDR-M
GSTDIPEVITDFYDNLPEIN
DFDLGPLGEFQANQSR-IDD
ITLREER---PNAYNRGL--
DFVANTDGEGLDDFGERDNI
RRARSRSIFEEMEEEMEQQ-
------------------RR
ESRNSIGAPGESFLVPRDQS
LLREDGPPQKDKEGFELFNS
DLNDFG--------------
TAEDLDLFFNASDLGR----
--------------------
-ELELNQGAATPMAP-----
--------------------
--------------------
--------GGDIEDQPMDIG
----EMQQVPSNDLSFQLEP
---IEQQP--HHERMRHKRK
RKLIIDEQKSLTGEEMKANM
-ADYSDTLQPLDLAPPTKQL
MLLREHNQLDKLLMMPANAE
WILDPDIIRLYQSHLELHAA
VHDDFDVTAAN---------
--------------------
--------------------
--------------------
-------------DLRRDLE
LSDAIVEEEYARVEERPESA
PLPVEA--------------
--------------------
-------------NENLVPE
PEMEVSQEVPTIPETLASPP
PVEKKSEKRRTRVDREEEEG
E-------------------
----------EEELFTRRTK
NVLQAIATKLRSNSENKITF
DDLLTKGSTRRTAAQKFYAL
LELKKWQAIEIEQEEPYGTI
EISTGPRLQETMKLPV----
------------------
>K08A8.3_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MCHPIEFCICTISDAS
AHTSSSRTSFCTPSTSHIVS
PSFPICIAAKCSRCGCVAAM
FYADFVLSKK-GPLSKVWLA
AHWEKKLSKAQIFETDVDEA
VNEIMQ-------------P
SQKLALRTTGHLLLGICRVY
SRKTKYLLADCNEAFLKIKL
VFRSGALDQPNPVLPTFS--
----IQDIYGDFGDNVLPEF
DEE--ELNHAPICQSR-LDD
ITLKEDI---PQKFTYNYGE
PLEDDDFGEIAAG-VGPEDY
YRLMEDVNKMDLEMELARD-
------------------AA
TTSDNLFGREREPTPFLNDA
HAPGNAIFGDEDFAGGDMDD
DDHNVQG------------S
SGFTDNNAMHMEDMDY----
--------------------
ESGNTMMRGETPLR------
--------------------
--------------------
-SDTPNTFRAPSPAPSIAPS
--------VATSVSAMEHDT
IESYYERQAQKRAMQKEQNM
RKRRVDDVKMITGEEMKGNM
-ADFSDILTRLDLAPPSRKL
MMGKKRSHAEYMHHNPGMIG
FSKNKQFIRKYQSYLVVTKH
DDVDEKNEWIKNALGLREIG
EEELQQQQQEMDMHVQDD--
--------------------
--------------------
------------SSYVDDFD
EVPPLDFDQLDMMDMPQSMD
DINMVD--------------
--------------------
----------------DDVP
QRNPLSPFAPMVEDEEMSPS
EKRKKRDEEKEEPE------
--------------------
--------TDEDNRWSKRTH
ALLQNIATKLENQNG-QVEL
DEMLKKGTSRKVAAAKFYSL
LCLKKNQCIDIEQKEPYGDI
MIKAGPNININTI-------
------------------
>TS_TRISPI_Contig18.SNAP.6_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------MRGYCSWPTRD
FWAPALGQVTPTRSVLFRPE
HRVLYMIMRAVKLYYGPVKM
FYAQYVLSKK-GPLAKIWLA
AHWEKKLTKAQIFETNIDRA
VESILE-------------P
KAKMALRTTGHLLLGIVRIY
SRKTKYLLADCNEAFLKIKM
AFRPGILNIDLPEDRIEADV
DAITLPEVFHDFDSALPDFS
ELEY--ADDISSTQGK-LDQ
ITMKEDA---PKVLVD----
--VDDEFDDADG--FDSFEL
PREEVSQFLDDASIPQLNT-
------------------AE
STNNEPVVAEKTVEVLSDTV
RLESTEESTVNVMMDTDLEM
FPTNE---------------
SSTAEEISVEVEIFCF----
------------------LK
VHCKEEPAAVPSVT------
--------------------
--------------------
--ETASAEMRSSSESSKMTT
-------LVHDEDEEFALEP
---LESIVTQIPAKVRVKRK
RRLLVDNVKTLSGDDIKSQL
-HRYSDTLGSLDLAPPTVVL
MKVREAASVDKLFSLQGIPC
R--SPTLNKFWKSAIGSKMA
KFKADSSRMKALEATTLEKM
RG------------------
--------------------
--------------------
--------------MDGTNS
NVERSTLSEIELQPSADATL
TEAN----------------
--------------------
--------------EMIDVI
PSDMQSLNEPDMTKLSDVET
VQLLGNSGATINIELDLSKE
EWEHS---------------
----------DESAKDRRWT
KRSQLVSLFSYCYGS----L
WKEWTSRDTRKSAAQKFYCL
LELQKASAVKVEQEEPFGDI
FIKKGTVS------------
------------------
>F10G7.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
FYAQFVLAKK-GPLAKVWLA
AHWEKKLTKAQIFETDVPQA
IEEVIR-------------P
KVKMALRTVGHLLLGIVRIY
SKKTRYLLADTNEAYQKMKI
NFRNGFSFEVDIPENAEI--
-EEDFSNFIDKYNITVPEFH
DAD--YNEQLIMANVSRRED
ITMKETVNFNVEFNIDADFD
GFGDEGESWQLDHLYGSVEP
LSLRPTPQPESLMEVERDRD
-----------------VAA
NGTEISRIDADSVIFSEGPT
RPNLIFDNQEGGNFMPEMNL
KVEN----------------
QTLENDGGVGPADMFS----
-------------------S
MIHPVREHAVADVQN-----
--------------------
--------------------
-DDGMDFDYQPFEPENVEPS
--------RPQSPESFALEP
LDVEHME----GRKKRQRKA
RKLIVDAETMISNDAFREQQ
-EDFSDTMRVVEMAPPTRKM
FNLCVSGDLQHLSREPGCKM
FN--RELLQRYRRCLVTREF
DLNYTMQELSDSSSFTPSME
AQAEPWEDLNLNEDIQED--
--------------------
--------------------
----------IQAQGPAVDE
FFNDVRMDDDDDRQPAQEMD
FGDNFDFPQEVEHQ------
--------------------
--------------ECAPIP
IQSGFAGENKENEDAEDWSD
PFGSSNSSRRGQLEAYGFGN
TSTYK---------------
---------EDDGKWAKRAK
HILKKVSADIETSGQ--ADF
SSVTATAKNRKQAAEQFYSL
LTLAKSQAISVDQSEPYGEI
VIRPGANFKEACPLSSPKPM
GLGNTMENSTMRTPMRPV
