>TS_TRISPI_Contig0.g.FG.228_T_spiralis.071204.pep_
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----MTSSDKAIQERILK--
--------------------
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IQDELNSINEKISDLKRQAR
ELQAEKELLQERLDRRVQQA
NSVESLTSWETEFFS-WSSE
LSEKLKSIFGMNSFRPLQLS
AMNAILSGR-DVLLTMSTGG
GKSLTYQLPAVLGN------
---ASQFTLVISPLVSLMED
QVISLNTRGIEAVLLYQHTP
PEEMKRIL-----------A
EMNSPGCKFRLLYVTPERLA
KSKRFMAKLEKAYQAGLLKL
IAIDEVHCCSQWGHDFRPDY
KFLGVLRR--QFPDTPILGL
TATATVAVLQDIKEILNIPM
--ALEFRASFNRPNLFYQVQ
QKPD---RPEELLQIVCKLL
KGQ-------FSGQSGIIYC
FSKKDSETFAQNLRTNGVKA
EHYHADMDPNERGMVHRKWL
SN---KCQ------------
--------------------
--------------------
----VIVATVAFGMGIDKAD
VRVVIHLA-----LPKSVEN
YYQESGRAGRDGQPASCLLY
FGFADLFRLSVTVCNERNGL
---------ENLYKM-----
LAYCTGLASCRRRYFADHFD
EQWKPTW-CQSACDNCQRP-
-----PGSVHQQDVVQQ-CK
MALAILGASGERKFTALKLI
DTL-CKSEHSLKVDQCKPML
ELI--------LVHMLLEGY
LKEMFHFTPYNIISYVVPGL
RDLGDDEPVIVHFPEEICKQ
KATSTASSRKRKSADTSPLY
IS------------------
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>14965.m00420_BMA1.short_headers.longest_isoform.pep_
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-MEATGSLGAKLSMELSK--
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--------------------
--LDEELERIEGDICTLRKR
KRTLLERKAQIEKRIVERNV
ENESSFRIWDSDEFQ-WMKD
CRRILHDIFKLSDFRPLQRA
VINAVLSRE-DCLVVMSTGS
GKSLCYQLPAVV--------
---MKGIVLVISPLVALIED
QLHQLRKLGIDAATLNQSTA
KQEVNRIQ-----------T
ALTDSKASLRLLYVTPEKLA
KSKRIMNRLEKCNEMKRLKL
IAVDEVHCCSQWGHDFRPDF
KFLNVLKR--QFQAVPLIGL
TATATADVIDDVKNMLGIPA
--AVVFRAGFNRPNLHYSVC
QKPS---SDAEFVDILVELI
KTR-----------------
--------------AKGVKA
SHYHAFLDAGKRNITHEKWL
NG---GIN------------
--------------------
--------------------
----VIVATVAFGMGIDKPN
VRYVIHHS-----LPKSLEN
YYQESGRVGRDGNEAHCILF
YRLNDLFRQSTMVCTEKTGV
---------RNLYSV-----
LSYCIEASECRRSVIAEHFN
VEWNSSL-CSKMCDICAQTN
AVECIDVTNYWRQMLEV-LN
AQKTDNNRITGMKLVELTWK
KVS-SVSRELIELLVAKLIL
DGY--------LKEDFHFTP
YSIISYVVPDEKSIAMENRS
DHRITFSIPSKLICSG----
-KTVKFSRKRPLIIDDDDED
DVVMLR--------------
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>K02F3.12a_wormpep204.longest_isoform.pep_
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-MATFIFSRGNIFFYVNKIT
IP------------------
--------------------
-------------------D
LMSDVLLSKLSTELADLDG-
--------------------
--------------------
--------------------
--------------------
---EIGQIDQQISQLRRKKS
ELTQKRQAIERKIELKTNED
SDVVTD-RWDRDGFP-WSDE
ATKILKEQFHLEKFRPLQRA
AINAVMSKE-DAVVILSTGG
GKSLCYQLPALL--------
---ANGLALVVSPLISLVED
QILQLRSLGIDSSSLNANTS
KEEAKRVE-----------D
AITNKDSKFRLLYVTPEKLA
KSKKMMNKLEKSLSVGFLKL
IAIDEVHCCSQWGHDFRTDY
SFLNVLKR--QFKGVPILGL
TATATSNVLDDVKDMLGIQA
--ALTFRAGFNRSNLKYKVV
QKPG---SEDECTEEIAKTI
KRD-------FAGQTGIIYC
LSRNDCEKVAKALKSHGIKA
KHYHAYMEPVDRSGAHQGWI
SG---KIQ------------
--------------------
--------------------
----VIVATVAFGMGIDKPN
VRFVIHHS-----LPKSIEN
YYQESGRAGRDGQPATCILY
YRLADIFKQSSMVQQERTGI
---------QNLYNMVR---
--YAADSSTCRRVKLAEHFE
EAWEPSW-CQKQCDTCENG-
------NGFVGTSSKES-TD
VSEAAKTTVRIIEEHLNSAK
DGS-GRITGNKLVELLTKKL
KGS--------RNREFCEKL
IVNLLLEGYLQEDFHYTVYS
VISYVVIGSKWRVYNGKDAI
KMRHVEESKSRKRKASSSVE
EEDVMVLD------------
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>Smp_056620_Smansoni.v4h.longest_isoform.pep_
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------------------MD
SSSSTTQGIQETLKSLKKN-
--------------------
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-IDSITKQIDELNHQRKNLQ
VQYDQLKSQLTTARVQEISN
SLDKSSEYNSESLFP-WTSE
VNRVRKEVFQISEFRPLQIT
AINAVLDGR-DVILVMPTGA
GKSLVYQLPALLNVNAFKVN
GRYRGSLTLVISPLVSLMVD
QSINLTRYSLEPDTIAVLDA
NTPLQEQRRILSLLAEKPSK
TNASTKSNLRLLYVTPEKLA
KSKLLLNRLEIVYSTNRLAC
IAIDEVHCASQWGHDFRPDY
KFLHILRR--QFSNVPIIGL
TATATTEIIVDIENMLGLNV
DKCLVLRTSYNRENLNYYVK
PVSG---SIKASVKYLYELI
NKN-------YINQSGIVYC
FSQKDTEDVSSELKNFGLKV
APYHANLDFNYRSTVHSGWS
QG---KIQ------------
--------------------
--------------------
----VIVATVAFGMGIDKAD
VRFVIHFS-----SSKSLEN
YYQESGRAGRDSNSADCILM
WRFSDLFRLASMVSSERTGI
---------AKLYQMVG---
--YCIDPNKCRRYLISKNLG
DTS---------WSTDDCKN
------ACDNCQRKSTN-KS
DVSTLIQIKTNELLNATKQL
LFD-QSLTKQERITGPKLID
LMT--------CNKQIQSIS
QKLLNKNQEKPERQFYEHFI
SWCLIHQYLKLDFHFT---P
YSTVCYVVNNDNIVDNEHIE
LMPYLLSNKKEECFHVDAK-
--------------------
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------------------RK
RIHSTEIVDLT---------
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>Sjc_0003760_Sjaponicum_Proteins.v4.0.short_header.pep_
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------MMTFLFQSKKITSL
EQSSRNPMNRSIGVCHSPQS
TRSVGCQFSPGSKPRVSVSP
TLLDVSSNSESFEGLDNYLE
PSNTINLPKYRKSQKRLNPD
MSPLQKYENSFSLLVERYVN
VWSRERKRKDVLQLFQLNFV
KRKEWFNLHVYRLLIKESIL
QVATLISRG-----------
--------------------
--------------------
--------------------
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--------------------
-EAAGEQEARDIQIAYKRFS
DIS-----------------
--------------------
--------------TLFILM
NSSHKSQELQQTLKYLKK--
--------------------
--------------------
--------------------
--------------------
KIDSITKQIDELGDERRKLQ
EKYDELKSQLKTVRVQEISN
SLSTTLSEYGCEAIFPWTSE
VNRVKKEIFQISEFRPLQIT
AINALLDGR-DVILVMPTDX
XX---------X--------
---PGSVTLVISPLVSLMVD
QSINLTRYGLEPNTIATLDA
NTPLPEQRRILSLLAEKPSK
ANIPSTSKLRLLYVTPEKLA
KSKLLLNRLEIAYSTDRLAC
IAIDEVHCASQWGHDFRPDY
KFLHVLRR--QFPNVPIIGL
TATASAEIIVDVQNMLGLSV
DKCLVLRTSYNRENLNYYVK
SVSG---STKVSVQNLYELI
NKN-------YTNQSGIVYC
FSQKDTEDVSSELKNFGLKS
APYHANLDFSYRSRVHTEWT
QG---RIQ------------
--------------------
--------------------
----VIVATVAFGMGIDKAD
VRFVIHFS-----SSKSLEN
YYQESGRAGRDSNPADCILM
WRFSDLFRLASMVSSERTGI
---------IKLYKM-----
VEYCIDSDKCRRYLISKHLG
DASWSSDDCRN---------
------ACDNCKRKSTN-KS
DISRLIQIETAELLNATRQI
LFD-QWLTKHERITGPKLID
LMI--------SNKQLQSIS
QKLLNGIQTTLQRQFYEHFI
SWGLIKQYLKXXXXKTPLD-
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>Minc06325_MiV1A1.short_header.longest_isoform_
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-MIHDDFYDTSNDYLFATEN
QE------------------
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------------------IE
DSPSVILDEQTHNDQLLP--
--------------------
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----------KINDKPENCS
NLQNYDENEDELTSVTPTSE
TISILKKYFGFSKFRPLQYQ
IVHSAILKR-DQLVVMSTGY
GKSICYQMPALLQ-------
---EGLITLVVSPLISLMED
QVFALQQAGIEAAYLGGNSN
IPRDVIFD------------
--QIRMNKLKILYITPEMYE
CSPSYVDRIAQFVG-----L
LAVDEAHCISAWGHEFRPGY
RTIANMRK--SLPKVPVMAL
TATATEPVRNDIVENLRLVS
--PKITVTGFDRKNLFIEVK
KRTQSLTFQRAVQNDLESLL
IED-PILGLHFGGST-IIYC
QSRDHVNQITEQLRKTGVRA
VGYHAAMSNKQREKSHKEFL
TEKAT---------------
--------------------
--------------------
----TCVATIAFGMGIDKRD
VRKVIHYG-----SPGNIES
YYQEIGRAGRDGFPSRCTVF
YSNSDMLIHKNRIINKNNNN
NITTKSSKDYEMHQLDMLRR
MEQFLTTTSCRRYLILSYFD
KNVKHPEIPKSDC-------
-------CDNCTKLLQSGVD
KRYNKEEMISDFGEEAKKLF
RTINEVFGGRTGLNKPIDFI
RGSKTVLSKAPKTFTKGEDL
SKHPLYGCGKSRSEMWWKEL
GKLLRNYGYLIDSKSTFNQF
GCITNISDKAEKWLREGGKK
IEIFSD--------------
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>Mh10g200708_Contig50_99363..104961_M_hapla.pep_
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-MIHDDFYDTSLDYLYAAEN
QQ------------------
--------------------
----------------IEQP
PLDGKTQDDQWLS-------
--------------------
--------------------
--------------------
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--------------------
---------NNNDKPNNCSV
LPNYEENDDEELNSITPSEE
TISILKKYFGFSKFRPLQYQ
IVHSAILKR-DQLVVMSTGY
GKSICYQMPALVQ-------
---KGLITLVVSPLISLMED
QVQ----AGIEATYLGGNSN
ISRDVIFD------------
--QIKMNKLKILYITPEMYE
CSPSYIDRIAEFVG-----L
LAVDEAHCISAWGHEFRPGY
RTIANMRK--SLPKVPVMAL
TATATEPVRNDIVENLRLIS
--PKVTVTGFDR--------
----------AVQNDLECLL
TED-PKLGLHFGGST-IIYC
QSRDHVNQITEQLRKAGVRA
VGYHAAMSNKQREKSHKEFL
TD---KAT------------
--------------------
--------------------
----TCVATIAFGMGIDKRD
VRKVIHYGCMVFWAPGNIES
YYQEIGRAGRDGFPSKCTIF
YSNSDLLIHKNRIINKNNNN
--ITTKSKDYEMHQLDMLRR
MEQFLTTTSCRRYLVLSYFD
KTVKHPEIPKSD--------
------CCDNCTKLLQSGVD
KRYNREEILTDFGDEAKKLF
RVIDEVFSGRTGLNKPIDFI
RGSKTVLTKAARSLTKGEDL
SKHQLFGCGKQRSEMWWKEL
GKLLRNYGYLIDSKSSFNQF
GCITNISDKAEKWLRGGEKE
LKLIPSEYLSNSNNIDNG--
----------------RDSN
NATLSISNKVVEILSEKLLG
IEKLQEYNDASYYPG-----
----------------VASA
SAKNIFVYEMLPQLRKELED
LRYQLALESDCPANSVYSNT
VIEGLVKIRPTNEESLELVE
GFPEQRRKQFLKPITQLISN
FCSVNNISTDSKEAEIEFPE
DLESIKN-------GLTLTE
KNYYHAHVLYNRSLEETSSN
MNATSSTVANHLATAAKRGL
PLHLKTLGITFELIEAVHNK
IKEN--GRDIIRLKPIMEL-
LPEGILDYNRLKIIFSILEY
QYGIDTSENLNENLKNSKNK
EEDDEDEIISISPKKRKLPF
WIN-----------------
--------------------
--------------------
--------------SKKKGE
GNKINEDEYVYNTTTTTNVK
RKNFKQIKINNNSIFS----
----------
>F18C5.2_wormpep204.longest_isoform.pep_
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------MISDDDDLPSTRPG
SVNEELPETEPEDNDELPET
EPESDSDKPTVTSNKTENQV
ADEDYDSFDDFVPSQTHTAS
KIPVKNKRAKKCTVESDSSS
SDDSDQGD------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------DCE
FIPACDETQEVPKIKRGYTL
RTR-----------------
--------------------
------------ASVKNKCD
DSWDDGIDEEDVSKRSED--
--------------------
--------------------
--------------------
--------------------
TLNDSFVDPEFMDSVLDNQL
TIKGKKQFLDDGEFFTDRNV
PQIDEATKMKWASMTSPPQE
ALNALNEFFGHKGFREKQWD
VVRNVLGGK-DQFVLMSTGY
GKSVCYQLPSLL--------
---LNSMTVVVSPLISLMND
QVTTLVSKGIDAVKLDGHST
QIEWDQVAN-----------
----NMHRIRFIYMSPEMVT
SQKGLELLTSCRKH---ISL
LAIDEAHCVSQWGHDFRNSY
RHLAEIRNRSDLCNIPMIAL
TATATVRVRDDVIANLRLRK
--PLITTTSFDRKNLYISVH
SS-------KDMAEDLGLFM
KTD-EVKGRHFGGPT-IIYC
QTKQMVDDVNCVLRRIGVRS
AHYHAGLTKNQREKAHTDFM
RD---KIT------------
--------------------
--------------------
----TIVATVAFGMGIDKPD
VRNVIHYG-----CPNNIES
YYQEIGRAGRDGSPSICRVF
WAPKDLNTIKFKLRNSQQKE
--------EVVENLTMMLRQ
LELVLTTVGCRRYQLLKHFD
PSYAKPPTMQADC-------
-------CDRCTEMLNG---
-NQDSSSSIVDVTTESKWLF
QVINEMYNGKTGIGKPIEFL
RGS-------SKEDWRIKTT
SQQKLFGIGKHIPDKWWKAL
AASLRIAGYLGEVRLMQMKF
GSCITLSELGERWLLTGKEM
KIDATPILLQGKKEKAAP--
----------------STVP
GASRSQSTKSSTEIPTKILG
ANKIREYEPANENEQLMNLK
K-------------------
-QEVTGLPEKIDQLRSRLDD
IRVGIANMHEVAPFQIVSNT
VLDCFANLRPTSASNLEMID
GMSAQQKSRYGKRFVDCVVQ
FSKETGIATNVNANDMIPPE
LISKMQK-------VLSDAV
RRVYTEHLISRSTAKEVATA
RGISEGTVYSYLAMAVEKGL
PLHLDKLNVSRKNIAMALNA
VRVHLGSNVAVLTPWVEAMG
VVPDFNQLKLIRAILIYEYG
LDTSENQEKPDIQSMPSTSN
PSTIKTVPSTPSSSLRAPPL
KKFKL---------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
