>F21D5.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MDLTV
PVEYSRAGNTTHSGNVHAI-
--------------------
-QDDEKFSYGTAGFRFKS--
------EKLPFIVFRCAYVA
SLRARQLNS-AIGVMITASH
NPSCDNGVKLVDPSGDMLNE
QWEIYATEVVNATDAELPAA
VRALEKQISVGKTQL---SR
VVCGMDTRCSGPCLMNAARA
GAALFN--VQFDDIGVVSTP
MLHYAVKAFN-EPKFAEPTH
DG----YYSAIADSFKKLYE
ITEEPKDSRYQPKVIVDCAN
GVGAPRFRNLLERIP-----
--------------SSLLEV
EFR--NESE-ELNQGCGADF
VKISQKLPANFSPT----AA
EPKCASFDGDADRLMYF---
---RAKASENSE--------
-------SNDAELFDGDKIA
VLIVTYIREQLKDYENSTPM
ERLRLGIVQTAYANGSSTRY
IREKLGIEPIIVPTGVKHLH
EAASEFDIGIYFEANGHGTV
VFSEIFDRIIRRTPTES---
----LPLRRLALFSRVINET
VGDAFADLLAVEAVLRHYGW
SMDDWAEKLYRDVPNVQIKV
PVIDRSIFKTTNA-EQTLVK
PVGIQKMIDT-------DVA
KYNNSRAFIRPSGTENIVRV
YAEADTV---------ENTL
QLGKSLEQVVLNLCNSN---
--------------------
----------
>Smp_157710_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------MGSDYS
YRVRGKRGDAQFIKRRNQVT
IRKYTSENEGEIKCSIIGRK
KHMTLDERFQKLGTLLQGFK
ITDSSLLSYGTAGFRLPA--
------DKLGGVAIRLGILA
CIRSLNLRCRAVGIMITASH
NPPCDNGMKLVDPHGGMLDA
EWEPVVVSFINCRDESISKW
LSEHCCN--FQDDQL---PH
VVLGFDTRESSPALANEVKQ
GVNVMH--GICHELGLVTTP
QLHYFVQYINSIGNLCSNQL
VDLETIYVHHFAERFTTALE
NLQSCAES---IHLNVDCAH
GVGSKVLERFRAYFSSVKGP
--------------RRLILH
LYNTETENKELLNQNCGADF
VKITLNAPKLTPPNEQSIMY
PDRWATIDGDADRLIYFRPI
FTHYSPSSGDDNRLNNDVKE
LHLPGAVAQQVELLDGDRIS
CLFAHFLVKVLKSVSSD---
RNLTIGVIQTAYANSASTRY
LTEHLHVSVVCVPTGVKHLH
HAAQSFDFGIYFEANGHGTV
LFSKHILNFAENLNVNN---
--------PLRTFIDLTNTS
IGDAITDILLVEYTLAWLNW
SFVNWFS-MYADLPSKQLKV
TVANRDLIKVTWD-ERRVTS
PIELQIAIDEAVQQADKLVG
KIGTSRAFVRPSGTENTVRI
YAESYTH---------EATD
WLSATIALITYKLAGGIGHQ
PTPPKPLHSICS--------
----------
>Sjc_0300980_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MALNE
RFREIE--------TLLSS-
------------------FK
ITDSPSLTYGTAGFRLPA--
------TKLGGVAIRLGILA
CIRSLNLHCRVVGVMITASH
NPPCDNGMKLVDPHGGMLDT
KWEPVVISFMHCADEYISKW
LSEHCCN--IQDNQL---PS
VVLGYDTRESSPALANEVKQ
GVDAMH--GVCHELGVVTTP
QLHYFVQYINSLGNLYSNQL
VDLETIYVHHFAERFTTALE
NLQSCTES---IHLNVDCAH
GVGSKVLESFRSYFSSINSP
--------------RKLILH
LYNTETENKELLNQNCGADF
VKITLHAPKLTPSNEQSIMY
PDRWATIDGDADRLIYFRPI
LTHCVPSSDDSLPNSAINEL
HPTEGSVSQCVELLDGDRIS
CLFAHFLVKVLKSVSS---D
CNLTIGVIQTAYANSASTRY
LKEHLRISVVCVPTGVKHLH
HAAQNFDFGIYFEANGHGTV
LFSKHVLNFVENLNVNN---
--------PLRTFVDLTNTA
IGDAVTDILLVEYTLAWLNW
SFMNWFS-MYEDLPSKQLKV
TVVKRDIIQVTWD-ERRVTS
PVQLQVAIDEAVDKADKSVG
KIGSSRAFVRPSGTENSVRI
YAESYTH---------EATD
WLSTTVAILTYQLAGGIGSQ
PTPPRPLQICNESVN-----
----------
>14972.m07285_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------MAEIIIPEI
YTRESN-------TDHNGRK
------------------VP
VSLTKKFSYGTAGFRANA--
------TYLPFIVFRVGYLA
GIRARYLNQ-TIGVMITASH
NPMEDNGVKIVDPMGGMLDA
AWENYADLIVNASDSEFLRK
SQEFLRQFSGRVVEN---AT
VFTAIDTRPSSKYIEEAALC
GAQCAR--VGGRRLGLLTTP
QLHYIVRCQN-DSSYGVPTE
AG----YYAKVQNALAGLNF
VTRCGKAY--IPTLHLDCAN
GIGAQKFPLMCISWS-----
---------------VLVVN
LMN---DQKTQLNDKCGADY
VKIEKKFPRNFDKIQ----A
FERCAAFDGDADRLVYF---
---YRDAS------------
--------NEFVLIDGDKIA
ALFAKYITEQVTGAG---LS
DVFMVSVIQTGYANGNSTKF
LRDKMGVHVCCVATGIKNLQ
KEAVKYDIAVYFEANGHGTV
YFSPRFYDILRTVITHKD-E
VDQTIQIKRLLYFSKLLNTV
VGDAMTDLLAVEMILKHYDW
TVENWNN-MYKELPNVQRKL
RAINRSVFQMSAD-ETTCVK
PRKLQGAINT-------IVS
KYTDGRSFVRPSGTEDVVRI
YAEAATE---------HDAE
AIANEVEVVVATYCV-----
--------------------
----------
>Minc10603_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MTSRPLIYGTSGFRAKAD-
------EQLQLIVYRAAFYA
AARAKKLGK-AVGIMITASH
NPGCDNGLKLVDPSGRMLAM
ECEEELTKIANGTEEEFEKF
KNEEIQQIKNNEEKDNQTPI
IVIATDTRPSSAILYEEAVK
GIKLLGIFVDIKYFEHHTTP
QLHYIVKAIN-----EKKPV
DD----YIQQFRRALGKSRE
FLNVEENKN-LSPLYLDCAN
GVGSLWIAKYLENNGFICKN
GLDVTKNEEENLDKNNILVN
LFNTNTNDGELLNNGCGADF
VKIKTSLPANFPTN---LPV
RTRCASFDGDADRLIYF---
---YPNLE------------
--------GKICLLDGDHIC
AIFTKFINEQLNEAKTNGEL
INLNLGVVQTAYANGNSTRY
FSKKLNIKPLVTKTGTKHLE
EAALNFDIGIYFEANGHGTV
YFSDKFYKLIKEGENGKE-K
EQIPRYIKLLSLFSKLVNEV
DGDAIADLLTVEFLLRYFNW
TIQDWEKNTYSNCPSFQLKV
PVSNRNLFVTPEDNETRLLQ
PIGIQNKIDE-------CVS
KFLNSRAFIRPSGTEQIVRI
YSEANSL---------EEAK
QLANELEKIVKAEALKESID
YNFRNI--------------
----------
>Mh10g200708_Contig613_1871..3749_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MTS--
--------------------
--------------------
-LPQRPLIYGTSGFRAKAD-
------EQLQLIVYRAAFYA
AVRAKKLGK-AVGMMITASH
NPGCDNGLKLVDPSGRMLAM
ECEEELTKIANGTEEEFEKF
KNEEIQRIKNIKEKDNLIPI
IIIATDTRPSSSTLYEEAVK
GIKLLGISVDIKYFEHHTTP
QLHYIVKAIN-----ENKAL
DE----YIQQFRRALAKSRE
FIKVEENK-ISSPLYLDCAN
GVGALWIEKYLENNGFICKN
G--LDTKEDENLNKENILVN
LFNINTNNGELLNNGCGADF
VKIKTCLPANFPTN---LPI
GTRCASFDGDADRLIYF---
---YPNLDKENK--------
--------NLISLLDGDHIC
AIFTKFINEQLNEAKSNGQL
INLTFGVVQTAYANGNSTRY
FTEKLVLNE-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------
>TS_TRISPI_Contig4308.SNAP.1_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------VTKAFKNVNT
SMQQSCKAY-NPNVFIDCGN
GVGGKAMRFFVENLK-----
--------------PLLNII
LVN---QSNHHLNDKCGADF
VKIEQQIPTVYDANLR-ITP
GQRWASFDGDADRIVYF---
---YLDSK------------
--------RVFHILDGDKIA
VLMVSFVLDLIQKGN-----
LRTSIGVVQTAFANGSSTRY
IEDVLKIPVVITETGVKHLH
KEAKKFDIGIYFEANGHGTV
TFVLFSERMVDELQKHL---
--------------EPISAE
CAEARRTLSNLVHLIN----
----------------QCKV
TGERR---------------
-------CDD----------
QFASCRSDSSAS--------
--------------------
--------------------
--------------------
----------
>TS_TRISPI_Contig5.c.FG.76_T_spiralis.071204.pep_
MFAAQLARLIIGSVISYFTA
KLIVRQFDQTTAKKEQAKKK
AERICNILGIQVQDLDEYEM
RIATQLVNPKDCSVSWSDVG
GYSNLISELRENIIFPLCTS
IKSKHFSAPKDSFLRHRQSR
DHEMTAMMKALFLSHWDGFF
SESELRVVIIGATNRPKDVD
SAILRRMPLRFCIRHPLSQD
VNLFEIANHSCGFSCSDLVE
LCRVADIIRVRESLKQDQEI
KQENSFSEQVEIRPFEQSDF
LKAVERMNKDNEDMLLNRHD
EIELIANTLKCVMYRMGLLA
CLRSQQTGM-VVGVMITASH
NPAKDNGVKIIDPMGDMLAP
EWEKHATEIANYDQLISTIE
MIVSKNNICISAEAS-----
VFCAHDNRESSTVLYNVLKS
GVDVMS--GKFILFGMLTTP
QLHFIVRHGNCFKNYDPVFL
EN---FYYEEVTKAFKNVNT
SMQQSCKAY-NPNVFIDCGN
GVGGKAMRFFVENLK-----
--------------PLLNII
LVN---QSNHHLNDKCGADF
VKIEQQIPTVYDANLR-ITP
GQRWASFDGDADRIVYF---
---YLDSK------------
--------RVFHILDGDKIA
VLMVSFVLDLIQKGN-----
LRTSIGVVQTAFANGSSTRY
IEDVLKIPVVITETGVKHLH
KEAKKFDIGIYFEANGHGTV
TFAN----------------
--------------------
-GDAMTNLLLAETILQHRDW
NIEKWDE-MFVDYPCRQLKI
KNLGKSIPTLVLL-------
------------------FG
IFSAVHAFCQRK--------
----------------EDAD
DLAALIGKAVQEFVG-----
--------------------
----------
