>Smp_194460_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------HHGKPGDTG
RXXXX---------------
--------------------
---------VYIRYVIAKRL
TESKRTIPHYYLTMDIQVDE
ILEIRSKINSSLSN------
-LNDSKSVEPVPKISLNDIL
IKAASLTCLKVPECNSSWHG
D--FIRQYHTVDVSVAVAIP
SGLITPIIFSADTKGLVQIN
KEMRMLVTKAKQNKLKPQEY
QGGTFSISNLGMFG-ITNFC
AIINPPQACILTVGSTRPKL
LPDHK--NPKGFKEANILSV
TLCCDHRVVDGAVGAHWLSE
FKQILENPALFLI-------
-----
>Sjc_0216460_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MAFRA
GKPLMGLR--GFCRPCACFL
SGKRQIMPTTIDRSLTCRRS
VILVNHDWLSLSF-------
--------------------
----KRFLSYPTHLVVKLPN
LSPTMETGTVVSWAKNEGDE
VSEGDLLAEIETDKATMSFD
ASESGYLAKILAPAGSKDIP
VGTALCIIVQDENAVPAFKD
YVVE-S-TEKVATPKAKEVS
KPQTVSAATAPSPK------
--------------PTPVTP
TPTSKTPTCGERIVASPYAR
CLAAEKGLDLSQVVGTGIDG
MIRSVDLSAAPTSLKATT--
---MTTSPIPVS--------
-GKFEDISVSNMRSVIAKRL
IQSKQTIPHYYLTMDIQLDE
ILEIRSKINANLSS------
-LVDAKSDEPVLKISLNDIL
IKAASLACLKVPECNSSWQG
D--FIRRYHNVDISVAVAVP
AGLITPIIFSADTKGLVQIN
KEMRMLVAKAKQNKLQPQEY
QGGTFSISNLGMFG-ISNFS
AVINPPQSCILAVGSSRQKI
LPDNN--NPAGFKKANILSV
TLSCDHRVVDGAVGATWLGE
FKNILENPALMLI-------
-----
>F23B12.5_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MSKFPVP-------LRTIGG
LRPSTTAAISAANIGFTQSS
RALSTGAAA-----KSSGLV
GQVARQYPNAAAFSIKQVR-
----------LYS-------
--------------------
------SGNLPKHNRVALPA
LSPTMELGTVVSWQKKEGDQ
LSEGDLLCEIETDKATMGFE
TPEEGYLAKILIQEGSKDVP
IGKLLCIIVDNEADVAAFKD
FKDDGA-SSGGSAPAAEKAP
EPAKPAASSQPSPP------
----------AQMYQAPSVP
KSAPIPHSSSGRVSASPFAK
KLAAENGLDLSGVSGSGPGG
RILASDLSQAPAKGATST--
--------------TTQAVS
GQDYTDIPLSNMRKTIAKRL
TESKSTIPHYYLTSEIQLDT
LLQVREKLNGLLAKG-----
------TSGQATKISINDFI
IKASALACQRVPEANSYWMD
S--FIRENHHVDVSVAVSTP
AGLITPIIFNAHAKGLATIA
SEIVELAQRAREGKLQPHEF
QGGTFTVSNLGMFGSVSDFT
AIINPPQSCILAIGGASDKL
VPDE----AEGYKKIKTMKV
TLSCDHRTVDGAVGAVWLRH
FKEFLEKPHTMLL-------
-----
>Mh10g200708_Contig1860_15334..17665_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
MNVGKTLRILTACYSRNLRL
RQR---FSSKNVLHFRLAIV
QPNAGFRYLHLTS-------
--------------------
-----KRLDYPGHSKITFPA
LSPTMEMGTIVSWQKKEGDQ
LSEGDLMCEIETDKATMGFE
APEEGYLAKIILPEGSKDVP
VGKLLCIIVQDKDDVAAFKE
FSAD---EGGAAAPPPASEP
SKEPPKQEAQAT--------
----------------QAPA
QPLQEAPAKGDRLKASPYAK
KLAGEQGIDLSSLPGSGPGG
RILAADLAHASSQAPTPS--
-----------------GAP
TAEYTDIPLSNMRKTIAKRL
AEAKSTIPHYYLTSELYIDK
LMDVRKKLNALLEKEAKKTG
--------EKPQKLSINDFI
IKASALACLRVPEANSSFMG
N--FIREHLGVDVSVAVSTP
SGLITPIVFDAHTKGVATIG
YEVALLAAKARDGKLQPHEF
QGGTFTVSNLGMFGSVDHFT
AIINPPQSCILAIGAARRKL
VPADEESSEEKYRAVTSLHV
TLSCDHRVVDGAVGAVWLQH
FKRFMEEPITMLLWGTAGMD
KKRD-
>Minc12372_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
MNGSRALRILTACYSRNLRL
RQR---FSTHQVLHFRLAIV
RPNTGFRYLHLTS-------
--------------------
-----KRLDYPDHSKITFPA
LSPTMEMGTIVSWQKKEGDQ
LSEGDLMCEIETDKATMGFE
APEEGYLAKIILPEGSKDVP
VGKLLCIIVQDKNDVVAFKG
FSAD---ESVAAPAPPAIAP
AAQESTKQAPAV--------
----------------QAPT
QSPQETMVKGDRLKASPLAK
KLAGEHGIDLSSLPGSGPGG
RILAADLSQTSAQAPIPS--
-----------------GAP
TAEYTDIPLSNMRKTIAKRL
AEAKSTIPHYYLTSELYIDK
LMDVRKKLNALLEKEAKKTG
--------EKPQKLSINDFI
IKASALSCLRVPEANSSFMG
S--FIRENLGVDVSVAVSTP
SGLITPIIFDAHTKGVATIG
YEVGLLAAKARDGKLQPHEF
QGGTFTVSNLGMFGSVDHFT
AIINPPQSCILAIGAARRKL
VPADEESSEEKYRAVTSLQV
TLSCDHRVVDGAVGAVWLQH
FKRFMEEPITMILWGTAGMD
KKRGD
>Minc03953_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------------M
MNGSRALRILTACYSRNLRL
RQR---FSTQQVLHFRLAIV
RPNTGFRYLHLTS-------
--------------------
-----KRLNYPDHSKITFPA
LSPTMEMGTIVSWQKKEGDQ
LSEGDLMCEIETDKATMGFE
APEEGYLAKIILPEGSKDVP
VGKLLCIIVQDKNDVTAFKE
FSD--V-ESVAAPTPPATAP
AAQESTKQAPPV--------
----------------QAPT
QPPQEIMAKGDRLKASPLAK
KLAGEQGIDLSSLPGSGPGG
RILAADLSQASAQAPIPS--
-----------------GAP
TAEYTDIPLSNMRKTIAKRL
AEAKSTIPHYYLTSELYIDK
LMDVRKKLNALLEKEAKKTG
--------EKPQKLSINDFI
IKASALSCLRVPEANSSFMG
S--FIREHSGVDVSVAVSTP
SGLITPIIFDAHTKGVATIG
YEVGLLAAKARDGKLQPHEF
QGGTFTVSNLGMFGSVDHFT
AIINPPQSCILAIGAARRKL
VPAEEESSEEKYRAVTSLQV
TLSCDHRVVDGAVGAVWLQH
FKRFMEEPITMILWGTAGMD
KKRGD
>TS_TRISPI_Contig11.b.SNAP.64_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MLLTLYSDSKIAVAVG
EMGLHLNTPASAMYRYARMT
GRLTRCFSIFQLEHLSYKCE
KHVSTKWTNIRLLNFSSILP
--CSQMTSYLIDS-------
-------------------L
RAVWKYLGSLPSHTKVHMPA
LSPTMEKGNVVSWKKKEGEE
VAEGDLLCEIETDKATMGFE
SGEEGYLAKIVIPEGSKDVP
VGNLLCVIVENADDVAAFSK
LSAEELGAQPVGQAPAPAAA
APAAPAAATAAAAPPPPP--
----------VTAAAAPAAA
PKPPVQAPPGGRVFASPLAK
KMAGEQKIDLQSMKGTGPEG
RILAGDLSQPAAAGARMQ--
---------------MVLPA
GGKFTDIELSNMRKTIARRL
LESKTSIPHYYLTVEIFVDK
ILQLRSKLNEELKK------
---------ENRKISVNDFI
VKASALACKKVPEVNSFWME
T--FIRRNEFVDVSVAVSTD
TGLITPIVFNADSKGILEIS
EEIIALSTRARAGQLKPEEF
QGGTFTVSNLGMFG-VNHFT
AIINPPQSAILAVGTVQKRV
VFDE----DKRCAEANVLTV
TLSCDHRIIDGAVGAKWLQQ
LKRYLEKPYTMLL-------
-----
>13647.m00022_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------VRYET-----
IGTASAVPKANTMTATTGN-
-----YGSSIISP-------
--------------------
--------------------
--------------------
--------------------
--SRAMKSEGNRIVAMPYAR
KLTTVPGINLLEIDDINSNG
RHNIAKVSKTATDNIAMN--
--------------------
--------------------
EKINKIYPHYYLTSEIKMDE
LLKMRVNLNADLKD------
---------QSVKISINDFV
IKASALACMDVPEVNSFFLE
KEKVIRQNLTVDISVAVKTE
TGLITPIIHSAHIKSLAQIS
TEIKQLANKAHNNKLKPNEY
MGGTFTVSNLGMFGSIHHFT
AIINPPQSCILAVAGSERKV
VPDD---NENGFKIITTMLV
TMSCDHRVVDGAVGAIWLKH
FKEYMEKPETMLM-------
-----
