>14972.m07827_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
----------------MKFP
PIRRRMGLFEKDLRSIIQLG
LG------FMLIFS------
--------------------
--------------------
--AFNSQGMIEIAVIKN---
--------------------
-AAEKHPASGITEQSGYYSL
AIIYLTFTFSNLLAPAI-IN
VISSKWAMIFGASAYCIFML
GFMYLNMYFLYIFSALTGFG
AAMLWTGQGVYLTTWSRIDT
----------VARNSGILWA
TLQSCFIFGGL---------
--------------------
--------------------
----------FLFFISFSGS
IV------SSVSLIYAVFST
VTFIGVIILALLPTKPGG--
MACSTGHSDGERDEGVVEEE
NNVSIVNGRINFETRSVRGT
LTPHT---------------
VVLWKDEFHNTLRVAVTRRM
LLLAVVFMYTGIEMTFYTGI
YSACLASFGRLRDN-----G
LIIAYNTLAVGGGQVVGGLA
FGVFAN-KSIAYGRNPIILL
GTVVHLLTFFFIFLNVPMEA
PLHITYSEG---YIEPNYSL
TLICGFMLGFADSCWSTQIY
SLLS-SLYTINSSNAFALFK
FYQFEVLFLLTSHDVFPIQQ
NDALHRIALMAFAASLSFFY
GSVLLLHWQLLILAVSAVMA
ALCFFPVEWEAI--------
--------ALTIPPPIFSS-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>C27C12.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------MRRDLFTVVQLG
AS------FAFIFS------
--------------------
--------------------
--AFNSQGLIEVAVLR----
--------------------
KKAETSPDTGITANSGYYSL
SIIYFFFTFFNIVIPSI-VQ
KLGAKWSQIIGASGYLFFML
TFLYLNVWLLYFGSAVLGAG
AALLWAGNGCYLVEISRRNK
----------MERNSGIMWA
MLQSSLITGGI---------
--------------------
--------------------
----------FLIYVLRSGD
LS------NSFTFIYMVFSS
VIAIGIVVLLFLPNNPAQ--
--------YGSQNEDIESSE
-------DPLILPETENDVT
LPAS----------------
--SVSEQLRSTIALLLTPNM
LCLAVLFVYSGLEMTFYTGV
YTSCLSATLPLKIFS----D
LVIPYNALSIGAGQIAGGVV
TGPLM--KILRMRSQHIIYL
AFVGHLTSFILAYLCLPYDS
TVHSTDAS---TYLAPTLNL
TLIISFLLGVSDAFWQTQIY
VTIG-QVFKEDPVNAFAIFK
FFQ-----------------
----------SMAACVSFFY
SSFLFLPSQLLILTIGCVAS
TFFFLKVRLAIQ--------
--------VPIVELVRDREI
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>F36G9.3_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
-------MMSIATQNVVQLA
FG------FFVNFV------
--------------------
--------------------
--AFNTQGMIEESVVES---
--------------------
----VSLDGSITKYAGYYSL
AIIYAFYTLGNLTAAQI-VD
TLTPKWAMCIGALCYASFQV
GFLFLNSTYLYISSAILGFG
SSILWTGQGSYLSQNCTKET
----------TSRMAALLWG
MHECCLIGGGI---------
--------------------
--------------------
----------LIFIVFSVTD
SY------DVIPKFTIKLLY
SMFTILAILSAFVFSMLR--
--------------------
-------EPVYKKEKSGCYK
K-------------------
------LMTSTFRLLFTRKM
LFLIVIFSYVGIEQSFWTGI
YPTCVSFTRKLGYNG----N
ALVALNLICTGIGQVSAGII
FGFLGD-KVRKLGRDYLILF
ATFIHLLAYVIIGLNFPASA
SLTKNDDSG--LFWTPNLYV
ALAIGIVLGFADACWNTQIM
SFLC-ETYPEKSAQAFAIFK
FFE-----------------
----------SLLSCFTFIF
SSLISLYWVLTILSIFSILA
LICFFIVERERVD-------
------LENAEENAMENRK-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>M153.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
-----MPLLDNPTLNVIQLG
FG------FFATFF------
--------------------
--------------------
--AFNSQGFIEEAVIDS---
--------------------
----AADSGSINKHAGYYSL
AIIYAVFTVANFAAAPI-VD
ILTPKWAMVFGSCCYTIFQV
GFLFLNEWYLYASSALLGFG
ASIIWTGQGSYLSQNCTKET
----------TSRNSSMLWA
MSESSLLGGGI---------
--------------------
--------------------
----------FLFIVFTVQG
AQ------DQIPSSTINILY
SVFTVLSLISTVIFALLR--
--------------------
-------APSYPAVVDRKNY
G-------------------
-----KLVASTFKLMLTKKM
ILLAFVFAYTGIEQSFWTAI
YPTCISFTKQLGNNTN----
ALLALNAICTGFGQIAAGVF
FGLLGD-KSRKIGRDAIILC
GTIVHLVVYALCYINFPQDS
SLKKTDEMG--GLIQPNLAI
ALIAGGLLGFGDAIWNTQIY
SFLC-DTFSKQSAQAFSLFK
LYQ-----------------
----------SALSCAAFFY
APVLQLYWHLVILVVTSLFA
ACCFFYVERISRETSSIRDS
YSFTDDKMAKLRGDVQYNIN
SNEIQNSE------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Mh10g200708_Contig1079_38258..40982_M_hapla.pep_
--------------------
--------------------
--------------------
------MAINSQTLNVFQLG
IG------FFFVFL------
--------------------
--------------------
--AFNSQGFIEESVLDS---
--------------------
----FVAQGVVKRHDGYTSL
AIIYASFTLLNIAAAPI-VG
IFGTRWALLFGAFTYATFQA
GFLFLNRFYLFGSSALLGLG
AAVIWTAQGKYLAINSQPET
----------AGKHSGLFWA
LSQACQVCGGIF--------
--------------------
--------------------
--------LLIVFLIHQHSN
PEEHYHFGSYFAPSTVKLLY
AVFTGITILGALILGLLP-L
NGENVGNNNRRHEEDSPSPS
EVLDPIINPISSQAATEAIV
DNGTEPI-------------
LTSLLFMIKSTFTLAKTSKM
LLLSVPFMYTGIVVSFWSSI
YPTSIANTELFQLNQGVDPK
VLLALNAIIQGFGQSSAGLL
FGVFGVRTSKILTKSNIVLI
GSFLQLLAYFAIFASIPGEA
SLEKTLEEG--YLISPRIWL
ALLSGFLIGFGDSCWNTQIF
SLLI-SSQNE-SASAFSLFK
FYQ-----------------
----------SLLTFLAFLY
ASLLSLYWHLLFLFVGSLFA
LLSFIYVEKRSQ--------
----QQQINVDISEQQHDIN
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Minc08560_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
------MAINSQTLHVFQLG
IG------FFFVFL------
--------------------
--------------------
--AFNSQGFIEESVLDS---
--------------------
----FVAQGVVKRHDGYTSL
AIIYASFTLLNIAAAPI-VG
ILGTRWALLFGACTYALFQA
GFLFLNRFYLFGSSALLGLG
AAVIWTAQGKYLALNSEPET
----------AGKHSGLFWA
LSQACQVCGGIF--------
--------------------
--------------------
--------LLIVFLLHQHSN
PEEHYHFGSNFAPSTVKLLY
AVFTGITILGALILGLLP-L
NGENVGNNRRRHGEDSPSPS
ELLDPIINPISNQPTGEANI
LDDVNGTD------NEPNNI
LTSILSMIKSTLTLAKTSKM
LLLSIPFMYTGIVVSFWSSI
YPTSIANTELFQLNQGVDPK
ILLALNAIIQGVGQSSAGLL
FGIFGVRTTKILTKSNIVLI
GSFLQLLAYSAIFASIPGDA
SLGKTLEEG--YLIYPRIWI
ALLSGFLIGFGDSCWNTQIF
SLLISHYSQHQSASSFSLFK
FYQ-----------------
----------SLLTFLAFLY
ASLLSLYWHLLFLFVGSILA
LFSFIFVERTSLQTTIN---
-------VDISEEQQQHDIN
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Mh10g200708_Contig335_631..2658_M_hapla.pep_
--------------------
--------------------
------------------MP
FNIRPACFLNPHTRNVLQLG
IG------FFFIFL------
--------------------
--------------------
--AFNSQGFIEESVLDG---
--------------------
----YTQTGKVDKHAGYTSL
SIIYASFTVCNFVAPPI-IR
LLGTRTSLVTAGFVYVLFLA
GFLNVHQWFLYGTSALLGLA
AAVLWTAQGKYLTLNSTPQS
----------AGRHSSLFLC
CAQACLSCGGL---------
--------------------
--------------------
----------FLLIVFLLSP
SD-------DVNTQMLQQST
NKTINNSFTSENVKLLYS--
----------FFTGIALIGV
IVLSFLPPTQRNNTQEQQQS
SKEENEE-------------
-TFILTEIRSTFIIAKTPKM
LALAVVFANTGILLSFWSSI
FPTSIINTIIFQSQFS--PK
ILIALNGIVKGAGQPFLSLI
FERLQLDKIR---KSRIIFV
GALIQFFAILLCFINLPNEA
PLNQTTN---EAIIKPRVWI
ALICGFLLSFCDACWSTQIF
SFLI-INYPTQSAQAFALLK
FYQ-----------------
----------SLLTSLLFFF
SGYMSLHWHLFILLISGAIG
YWAFALAEKMEINEKNR---
------RFASKIEPIELN--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>F31D5.2_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
-----MVLLDTGTKNVIRLS
VS------FMLLFF------
--------------------
--------------------
--AYMSQEFIQEPLIEE---
--------------------
---EHRRGGNIDPHAGYHSF
AILYFFFTIACLLIAPV-VD
LITAKWSMVVGFFTYIAFQL
GFLELNSAYLYTTSALLGIG
AAFLWVGQGKYLTENCTSET
----------IERNTALMWL
IFKFSLLGGGV---------
--------------------
--------------------
----------FLYFMFQDQT
MH------ELVLSGDFKIFV
YVFCSISVVAAVNTAFLP--
--------------------
-------APAYVPEKREAVT
LAGT----------------
-------LKVTFRLIRQTPM
LLLAFIFLYTGFSRSFWIAI
YPTCIKFTSKLGEN----TT
KLLAISGIATGIGQIVAGGI
FSVLG-KRVRILGKDMIVVI
ACVLHLICFVLIYLFFPYDA
PLRPTQNVG---IFEPNAYI
AIFCSGLLGFGDAIIQTQVY
SFLC-DGYSEESSHAFALFK
FYS-----------------
----------AISSTIAFFV
SKYFTLAGHLLLYGAFAILS
AIAAVMAQKLYFHKTRHFFQ
EN-TKIHPAIESEPIKIQIS
ESGSTIESSEKTERKITDLN
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Y52E8A.4_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
-----MCGISRETVNMLRVS
TS------FLILFS------
--------------------
--------------------
--AVLSHEFIAEPLFHG---
--------------------
--LSEANIGGIQARDGYLML
CILYFTNTVSCFFAPFV-VS
RISGKWAMVLGMVAAFCMQA
AYMFPNRYILMVTSALGGAG
ATLLWVGQGQYITENISEAN
----------REKNTSIQWG
FYKMSLIFGGV---------
--------------------
--------------------
----------FFFFYFQNSS
ID------AIVANGQMQIFF
IVFMTFTVLSIINSIFLP--
--------------------
---------QSQVSQNQAIL
P-------------------
---FCETFVNSFKLLKTPRM
FCFTIFFFYTGLIRSFWISI
YPACIKFTSQLSTN----TT
AILTIGMIVTGCGQVIGSLS
VAVIGN-KIRKFGQHTLILC
ALILHIFLCVMISLTFPNDA
PLGHTDKNG--PVFGASVLS
AMTISALLGFGDAILQTQVY
SYIA-KYYQNESSTVFSIFR
FSS-----------------
----------GIASTLLFFA
AQYFHLMHHLILIAIFAVLS
GLAVLRFQKSSA--------
--------AVSEKQSEI---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>F31D5.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
------MKISTETTNVLRLS
IS------IVILFS------
--------------------
--------------------
--AVLAHEFIMEPLIAA---
--------------------
--LATAGRGGIEHRDGYLAL
CLIYFFNTISCFFAPYV-VS
KLSGKWAMVAGMMTIIIVHS
SYFLPNRYFILIASSIGGFG
ATFIWVGQGQYIIENVSDEN
----------REKNTSIQWA
LYKMSLIIGGI---------
--------------------
--------------------
----------FFFFYFQNEP
IE------AIAKNGQMEKFF
MVFLACIVISIINTCFLP--
--------------------
---------QSEMSRNRVSQ
P-------------------
---FFQTTKNCFKLLKTQRM
ISLAVFFFYTGLVRSFWISI
YPFCIKFTSNLASN----TT
RILTIGMIVTGCGQVIGSIF
VAIIGN-KIRKFGQHVLILG
ALILHVILFLMISLSFPNDA
PLHHTDGNG--PVFPLSVYL
AMAISALLGFGDAILQTQIY
SYIA-KYYQRDSSSVFSIFR
FSS-----------------
-----------KPLSWFFRF
QTMLAANHNNRSRLFHWLEN
SWNNRQINFQLFYSLCYLR-
-----KFFEAKNGKMKTGFL
RHFKDLIN------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>C08D8.1_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
-----MCGFSQATRNICQLG
SV------FFFNFF------
--------------------
--------------------
--SFFTLSALSQTIVES---
--------------------
----VAEEKGINRHAGYYSA
FLTYLVFTFGHFVATPI-VE
IITPKWSIVSGLVGYAMFEA
AFLWMNEYFLYFSAACAGFS
GSLLWTGQFDYLAQNSQPHT
----------LDRNSSNLWG
LSQTSLIFGGA---------
--------------------
--------------------
----------YLLILYRFQT
GN-------EFEMPLIRLVV
GSFFICTLVSIAIGLFLP--
--------------------
-------QPAFKVEKYKIAY
F-------------------
-----KHLSEIVKISFDRNL
MLLFFMFLYTGLELSFFSAV
FPTMVSFTKSLGNTR-----
DLNAISSIFVGIGNVSGCFA
LSVLGS-RVREFGRKKMVLL
GSILHMTCFLLTFLMFPDES
PLKPTEALG---YILPSPYI
ILVCGFLLGVGDTIFNQQCY
TILSDIYDHDKRIEAFAVYR
FYQ-----------------
----------SAASCVAMFY
SAHALLRTHVIILSMFCVIA
TATFFGVRVPEKYLVNP---
-----SAEMLEVKECEQQEK
LMI-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Smp_165680_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
------MNINLNIYNVTITG
LA------FFFLFA------
--------------------
--------------------
--AFQTASLTAQNVLEA---
--------------------
---VSKQRNNSFDGTGYTSL
AIVYISFGLFNWFAPIV-VM
YLGEKYSMIAGSFCYAVYIA
SYIEPFEWSLYLASFVNGIG
AAVLWTAQGAFITDCSTKSN
----------LNQHFSLFWG
LFQANQIVGGL---------
--------------------
--------------------
----------YAYLSLSNID
---------EISPTLRIQLY
GGLLGCAVLGILLLFTLRKP
HKTDISHQQLINVEINSSDD
NLSQLTPDYPTIQDRSTVFQ
S-------------------
---TLHSLRRSVKILTTKPM
ICILVAAAFTGINLTFYSSL
YASALGHCLRFGRN----AK
SYIGLAGLFIGIGEIVEG--
---------------VLVIF
GYISAIVAGYFTFMMLPTNS
SIKDTDELS---YITPNVYL
AMLIAFLFGGVDSVWNTQIS
ALIG-FIYGEHGRDVTVGFA
LFKS----------------
--------VQSIVSGIAFVY
STYLLLHWQILIFVVMATSG
LYCLLSVYWSHLS-------
---------RSVNLIA----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Sjc_0031170_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
------MSVDVNIYNVIVTG
LA------FFFLFT------
--------------------
--------------------
--AFQTASLTAQNVLEA---
--------------------
---VSEQKHGSFDGAGYTSL
AIVYISFGLFNWFAPIV-VM
YLGEKYSMIAGSTCYALYIA
SYIEPVKWSLYLTSFINGLG
AAVLWTAQGAFITDCSTKSN
----------MNQHFSLFWG
LFQANQIVGGL---------
--------------------
--------------------
----------YAYLSLSNIT
---------EIPRTLRIQLY
GGLLGCAVLGILILFILR--
--------------------
-----KPRKTHNFSNQQLIN
AEIN----------------
--SFGDSLSGLTGKLSNNTK
PSDSCSVYFT------LFAL
YASALGHCLHFGKN----AK
SYIGLAGLFIGIGEMVGSFS
SRLSR-----WIRLEGILIC
GYICAVVAGYFTFLMLPTNS
SIKDTDELT---YITPNVYL
AMFIAFLFGGVDSVWNTQIS
TLIG-FIYGEHGTDITVAFA
LFKS----------------
--------VQSIISGIAFVY
STYLLLHWQVFIFIVMATGG
LYCLLIVYWSHLS-------
---------HSVGT------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>TS_TRISPI_Contig8.a.SN.174_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MAVVGTALFALL
KQMRPEEQLESLLEYESDRE
--------------------
--------------------
--------------------
--------------------
--------------------
--------------SPSVDS
VAVTMVKKRLTVIEEIVR--
--------------------
--------------------
--------------------
----------TFKLLQSGNM
ICLVVVFLYSGILLTFWSGV
YGTCLTFTRQFTVS----TK
VLLALNVIFVGLGE--SGLV
FGLITS-TIESMGRPVVIIL
GAVVNVLSFFLIFLYIPSMS
PFQP----------------
--------------------
--------------------
--------------------
------------TDDIAYFL
PK------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>TS_TRISPI_Contig8.a.SNAP.264_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
-----MSHKTQTGLDIYFAN
KSPTACRRSFITLIVQSSHS
--------------------
--------------------
--KANSPSHIEKLTSKSQRS
K---------TSHFSQFEFS
LAASYFRRKLQRIMIQYVGD
CVQLVFQGKFHLSVTSSSFT
HVLVCWLRFANSSNDHWIHV
ARIVAMFQHPLLPIFQLGFG
FYFILTAFQSCSVIEVAILH
SAEAQNSTSHAIDKHAGYYS
IDVVQFVHNACCAKVIRKMV
NG------------------
--------------------
------DWWCYVQYIFGFVS
IFENGTAVRSVGISRFRCIF
LPTGGLFLYSQFRDGSNE-L
SSDTVRLIFIVFTCMAVVGT
ALFALLKQMRPEEQLESLLE
YESDRESPSVDSVAVTMVKK
RLTVIEEIVRTFKLLQSGNM
ICLVVVFLYSGILLTFWSGV
YGTCLTFTRQFTVS----TK
VLLALNVIFVGLGESLGSGL
VFGLIISTIESMGRPVVIIL
GAVVNVLSFFLIFLYIPSMS
PFQPTDDIA---YFLPNEYV
AILCSFLLGFGDSCWNTQIY
ATLG-SKYTTESTRAFALFK
FFN-----------------
----------SLSSAVSFFY
TSYLLLQWQLVILVVMCFLA
TFSYFKVENFGLQQSDIHHK
MSKNLKTIEIDDTDQARGYF
YLFDIEETVAERLIGLTEML
PEGMQKAIFTICSTASELGR
KLFVFTRSAMWIAASSAMIL
ILPVMFEKDRADFQQMHLQQ
QNQILFGPGAAAAYSGQAGS
SGDHGGKELNRLDVEYKEAS
ARLVQIHFESWKKMDKQQQS
WEQHIRQRSETLHCRRSKTS
VQAEQNCKPTKRHFSLANPI
EIEELIREGRTRIAIAVHYG
NPYPRPVYAFPKTLPIRKVS
NQQTEKQSPSMNHRMATNNQ
IPSTS
