>Smp_051300_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------MAGVKF
IRVCE--DDNESPIEVPIED
DGTVLLATLQSVFPKSTGLK
YLAPESGCLRGVRLNDG---
--------------KLFAPS
DGWVH---------------
----------VYQCAFPR--
----DNKRKGIEEKDIYSSK
FKKLEE--------------
--------------------
--------------------
--------------------
------------KKCTDLIV
LNLAWKTDESTLKEYFSRYG
DLVTV---------------
---------------QVKRH
PDSNLSKGYGFIRYNDMESQ
IMCLSER--HSIDGRLCDVR
IPISK---------------
--------------------
----LEGDRQ---EVSRKVH
VGGITESITATVLRDYFSQF
G-------AVLDVFIPKPF-
----RSFAFVSFEDPEVAAE
LLGKDQ-VIEGVCVSIGSAV
PNYTLSK-------------
--------------------
--IGMVLCILIR--------
--------------------
--------------------
--------------------
--------------------
-ILEIRTTLGPGNTTQQ---
--------------------
--------------------
--------------------
>Sjc_0201080_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------MSGAKF
IRVCE--DDDESPIEVPVEE
DDTVLLATLKSVFPRSTGLK
YLAPESGCFRGVRLSEG---
--------------KLFAPP
DGWVH---------------
----------VYHCAFPK--
----DNKRKGNGERDTFNSK
FKKLEA--------------
--------------------
--------------------
--------------------
------------KKCTDLIV
LNLAYKTDESTLKEYFSRYG
DLVTV---------------
---------------QIKRN
PDSNASKGFGFIRYSDIQSQ
IMCLSER--HNIDGRWCDVR
IPISK---------------
--------------------
----LEGDRQ---EVSRKVF
VGGITEFITADLLRDHFSQF
G-------RVIDVFIPKPF-
----RSFAFVSFEDPQVATD
LLGKDQ-VIEGVTLSIGSAV
PKLPPQQNRYSSLYPSSY--
------------YGNSQNPW
AWPYAPAMNNHG--------
--------------------
--------------------
--------------------
--------------------
-LRDFSHGMYNATQGYNMPS
HS------------------
--------PLENNFSSYHHQ
YDSYTNRINM----------
>Minc13108_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------MVDLLV
LGLPFELTEEELKKHFETFG
KVVHC---------------
---------------EVKIQ
KGSNTNRGFGFVQMNDLESQ
RKVLQQKT-HYIGGRACQVK
VPFTKN--------------
--------------------
-------------ALSSKVF
VGRIKEGTTTMDLREFFAEE
ARKIEPDSTITDVYIPRPF-
----RSFAFVSFSSPIVAKE
LIKVGQFTMGENQIYVSSAH
STRPPNSTQQQQQMVDNS--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-LSSYQHPFKPNAQKTRLTY
VV------------------
--------------------
--------------------
>Minc03025_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
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---MTDNSEVKSEKMVQPEY
VIVAKNLDEDSERIELPADQ
DGSLGIQTLAGAFPGAHGLK
YKNPATGAFRALLIDPAGT-
--------------KFFPPA
DGWENK--------------
----------VFIVICKQQD
PAPEKVQPKKGDQNAKRRKL
MVESDDGDSHDSDSDRPPGE
KLRNKSSGGGGETVKRQIGV
SKQKRMMGSVDNGSGGGGGG
ANSGGLISKYDNYPVEYVDE
MCEEEQNVLNFPNRMVDLLV
LGLPFELTEEELKKHFETFG
KVVHC---------------
---------------EVKIQ
KGSNTNRGFGFVQMNDLESQ
RKVLQQKT-HYIGGRACQVK
VPFTKN--------------
--------------------
-------------ALSSKVF
VGRIKEGTTTMDLREFFAEE
ARKIEPDSTITDVYIPRPF-
----RSFAFVSFSSPIVAKE
LIKVGQFTMGENQIYVSSAH
STRPPNSTQQQQQMVDNSLS
SYQHPFKPNAQNFFTDWYGS
HAGGAHGGDLTGTPSLASQI
VSSANLPLYPSHASMFTQAY
QQQPVFIGSQNAPPHSHPPP
GVAPGNQMLNQLETLNLNNM
GIGHEVVNAIKAIFSVAQQQ
NSPVSQHSQYSGHQQQKLPG
TISPPPINPIQSSSSGRYIP
PRERPTRRGNENNGSVGSGG
GGSIGSGGGSGWR-------
>Mh10g200708_Contig354_145717..140694_M_hapla.pep_
MSAAPTSMALASTGHQEVVV
SLFQLFMFLYFRCAEAAGGG
RNALSKNMLLVEEYGLGGRI
CSWCGLGGRKCSWTLPWIVI
ADNQFDPEPVCDNNDSEFKT
LPMPPLQQGLQQDITTRRNR
PKFLHEGALYVYHGMSSKKD
AKYWRCEFFNARDIKCRGRL
HTDLNDVVIRQIGDHVCNHN
AARVEAQRILSGIKRRAMVT
DEKPLQIRTQTLQNTPMAVI
AAMPSKEATKRMIKRARRGI
DMNTLLNPHACPIFKQDNGD
HYISYTEIDGQRVESYEHIP
SDYAKGVGVEEKWPRTGGTF
GGGGIPQMGSSTNPHGTIAG
ISEYQNNPNRQAAKATANRQ
RKKIKQEYLPPPPQPIAILD
RTLPHVFVNRKTNEFSFGCS
IAGYTPEELQVELVGAELVI
SGAHKQQTINQSFSATFSRR
ILLPEGVHKESIQCSVDDKG
LLNVIGQLMQVGKPKTIQQE
LQQQMQEQQLQQQQQLQQQP
SASSAVVIHRTFLNLSFNSY
CYSMTDNPEIKNEKMAQPEY
VVVARSLDEDAERIELPAEK
DGSLGIQTLAGAFPGAHGLK
YKNPATGAFRALLYFFDILR
FATKCFLRIDPAGTKFFPPA
DGWENK--------------
----------VFIVICKQQD
PVPEKVQTKKGDQNAKRRKL
MVESDDGDSHDSDSDRPPGE
KLRNNSSGGEVAAIKRQIGV
SKQKRMMGSVG------VEN
SGGGGELNNKFDNFVADYVD
EMCEEEQNIVSPNRMVDLLV
LGLPFELTDAELRKHFETFG
KVVHC---------------
---------------EVKTQ
KGSNTNRGFGFVQMNDLESQ
RKVLQQKT-HYIGGRSCNVK
VPFTKN--------------
--------------------
-------------ALSSKVF
VGRIKEGTTTMELREFFAEE
ARKIEPDSTITDVYIPRPF-
----RSFAFVSFSSPIVAKE
LIKIGQFTMGETQIYVSSAH
STRPHAQQMDTSLQSYQHPF
KPNAQTFFTDWYGSSAHAGD
TTGASNLQSQVP-------T
TLPLYPSHASMFTGTAYQQP
NQPPIFIGGQNAPPAGVAPG
SQMLN-----QLETLNLNNM
GIGHDVVNAIKAIFSVAQNS
AQHPQYGGHLHHSQQQKLPS
TISPPLVGMNNVQSGSGRYI
PPRERPTANIRRNNGTESNS
ISSGNTSLGSGGWR------
>Minc03026_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
-------------------M
VEEHAFGGWKNMPWIVEEYG
VVFGGFQLLCGGMEEYAVNG
GKNMVCCWMVEWKNMPLNGR
TCSGWKKMLLVVGEEAHFGY
KIVFNAKWWMLDQNMDHNFY
GASSEIADHQFDPAPVIDTN
DSEFKTPPMASLQQG----L
QQDITTRRNRPKYLYEG---
------------ALYVYHGM
SSKKDA--------------
----------NFPTLGRLHT
DLNDVVIRQIGDHVCNHNAA
RVEAQRILSG----------
--------------------
--------------------
--------------------
------------IKRRAMVT
TEKPLQIRNQTLQNTPMAVI
AAMPSK--------------
---------------EATKR
MIKRARRGIDMNTLLNPHAC
PIFKQDNGDHYLPGNMVYTE
IDGQRVES------------
--------------------
FEHIPSDFSKSDGVEEKWPR
VGGTYGGGGTPQMGSSTNPH
G-----TIGGVDGYPNNRQ-
----ETKTGAGRPRKKVKQE
YLLPPPQPIAILDRTLPHVF
VNRKTNEFSFSCNIAGYTPE
ELQVELVGAELVISGAHKQQ
TINQSFTASFSR--------
-------RILLPEGVHKETI
QCSVDDKGLLNVIGQLMHVG
KP------------------
--------------KTIQQE
IQQQMQRQQLQDQQQLQEQH
LQE-------EQQLEQQQQQ
PSASSAVTVYRRRYEAVISN
AKILNPPKNTQKY-------
>Minc13106_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
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--MSDIADHQFDPAPVIDTN
DSEFKTPPMATLQQG----L
QQDITTRRNRPKYLYEG---
------------ALYVYHGM
SSKKDAKYWRCEFFNARDIK
CRGFFLVLNLSFPTLGRLHT
DLNDVVIRQIGDHVCNHNAA
RVEAQRILSG----------
--------------------
--------------------
--------------------
------------IKRRAMVT
TEKPLQIRNQTLQNTPMAVI
AAMPSK--------------
---------------EATKR
MIKRARRGIDMNTLLNPHAC
PIFKQDNGDHYLPGNMVYTE
IDGQRVES------------
--------------------
FEHIPSDFTKSDGVEEKWPR
VGGTYGGGGTPQMGSSTNPH
G-----TIGGVDSYPNNRQ-
----ETKTGAGRPRKKVKQE
YLLPPPQPIAILDRTLPHVF
VNRKTNEFSFSCNIAGYTPE
ELQVELVGAELVISGAHKQQ
TINQSFTASFSR--------
-------RILLPEGVHKETI
QCSVDDKGLLNVIGQLMHVG
KP------------------
--------------KTIQQE
LQQQMQRQQLQGQQQLQEQQ
---------------QHLHE
EEQQLEQQQQTSASSAVTGE
IDVV----------------
>Mh10g200708_Contig354_143195..144844_M_hapla.pep_
--------------------
--------------------
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--------------------
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--MSVIADNQFDPEPVCDNN
DSEFKTLPMPPLQQG----L
QQDITTRRNRPKFLHEG---
------------ALYVYHGM
SSKKDAKYWRCEFFN-----
--------ARDIKCRGRLHT
DLNDVVIRQIGDHVCNHNAA
RVEAQRILSG----------
--------------------
--------------------
--------------------
------------IKRRAMVT
DEKPLQIRTQTLQNTPMAVI
AAMPSK--------------
---------------EATKR
MIKRARRGIDMNTLLNPHAC
PIFKQDNGDHYIS----YTE
IDGQRVES------------
--------------------
YEHIPSDYAKGVGVEEKWPR
TGGTFGGGGIPQMGSSTNPH
G-----TIAGISEYQNNPN-
--RQAAKATANRQRKKIKQE
YLPPPPQPIAILDRTLPHVF
VNRKTNEFSFGCSIAGYTPE
ELQVELVGAELVISGAHKQQ
TINQSFSATFSR--------
-------RILLPEGVHKESI
QCSVDDKGLLNVIGQLMQVG
KP------------------
--------------KTIQQE
LQQQMQEQQLQQQQQLQQQP
--------------------
----------SASSAVVVTE
IDVV----------------
>14284.m00375_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
------MSSGVSSLDAQFAS
EGNVVWXLLSRTGDQNTKRK
KMMDECEQEGDSEDSQG---
--------------------
--------------------
--------------------
-------GRGGQFTAKQKRI
EDPSGE--------------
--------------------
--------------------
--------------------
------------KACIDLIV
LGLPFKTSAETCKAYFENFG
EVVLF---------------
---------------DLKTD
P-SGASKGFGFVRMADFDAQ
QRILTQQT-HEIDGRRCQVR
IPLSK---------------
--------------------
----GDTGSP----IVTRIF
VGRVQEKTTVDTLRKFFNGE
ATKIDPNAFVTDVFIPRPF-
----RSFAFVNFSSPAVAKE
LMRQGDFIIDGSSVAVSAAA
PRESDFSPRYGQNASYGLP-
---------SQGRHSRRFSD
KYGYSPETVSFK-------S
PDYTSYPYDPMVSRSVDNWR
ANTYRSSDARASNRFSPGYS
NS------------------
--------------PRYSTP
ARSGTSQALASGLDALNLNK
MN-----------VNPDMMD
AAWQAFWSTLSNNSSNAGTG
TPSATNSNGKW---------
>F44G4.4a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
-------------MADETPK
VKTEPAAEVKSPLDEVKEIR
KEAELTQTGSDEKKTTDPEF
ITVQD--PNGDEPIELP-TV
DGVVLMTTLQASFPGATGLK
YKNPKTGANRAVQVDPSG--
-------------LKLIAPA
DGWENKTFFVIVAPQSER--
-----VRALSSADATSAKRR
KVGSSDDSDSDDGRDGRSGR
KRAVERD-------------
--------------------
--------------------
--------------------
------------SQPVDLIV
LGVDFKTTDECFQKYFEDIG
TVVFC---------------
----------------EIKR
KSDGNSKGFGFVRMSSVGEQ
NKVLAIPQ-HMIDGRRCDVK
VPDGR---------------
--------------------
----DKQGRP----SISRIF
VGRLTDKVDEHQLRKVFGDE
AKSYIETAVVTDVFIPKPF-
----RGFAFVTLSSAEAAER
IVSKGSLTVNGLSVGLSIAQ
PREENNQSVGPDYGLPAG--
------------YRNRRERD
RPDRRPIQN-----------
--------------------
--------------------
--------------------
--------------------
-EAPLPMPFVRPPQDYSYRQ
QN------------------
----------SPLERRYWAP
GDSRGPGW------------
>14975.m04505_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
--MFEQIKDAETKLNVETSD
LSVDAQSVRKGPTSVDFDGY
ISVGS-AEDGNNMLEIPVDD
DGNLPIATLAHSFPEAIGLK
FKNQTTGIYRTLAVDEQKR-
--------------CIYPPK
GGWGTRR-------------
---------YVAIFASPAGD
RKRRSNDDMGDLVGEKRSGW
DGSLNES-------------
--------------------
--------------------
--------------------
-----------LRVPVDLIV
LNLSFKTDEEALKKFFEQYG
EVQYV---------------
---------------EVKRD
FKTNMPKGYGFVKFADIESQ
DKVLRDKE-VFIDGRVTQVK
LPNHFTNRIS----------
--------------------
-QQPSFEMPPAQETISTKLY
VGRVWNTLTEKDIFDVFDAE
AKRLSPLAKVERVFIPKPH-
----RGFAFVTVNDPNVTKR
FCQIRDFIIKGKSVCVSIPT
PKNSAKQMQQQIQNQDVYP-
-------------TQYPISQ
PPQSSMHSSNYP--------
--------------------
--------------------
--------------------
--------------------
SQFPQNQSWVNPRTTYRNLG
AP------------------
----------MSYPHDYSNS
QQWK----------------
>14298.m00108_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
--------------------
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--------------------
--------------------
-------------MSDVNIP
PREEEEEEEEECAKTKENDA
GEQENNQDTSAATDGEEVDH
VCVCATEDEDCTPLELPLAS
DGTLPCFTLSHSFPKAVGLK
YKNPATGLFRSLPVDEGKK-
--------------CVLAPK
GGWHGHR-------------
--------------------
--YVAIIDDSLSSSDRLEGQ
CGQTDR--------------
--------------------
--------------------
--------------------
-----------LNMPVDLFV
RNLSFKTTEEQLKKFFEQYG
EVQYA---------------
---------------EVKKD
YRTGLPRGYGFIKMKTLEDQ
EKVLKEGD-FYIDGRMAQVK
YPDHG---------------
--------------------
-----QDGGDQDDRITTKIY
VGRVYAEITETDLHKLFDEE
AKKISPLAKVERVFLPKPC-
----RGFAYVSLNDPKVVKR
LCQIRDFVCAGKSIYVSIPR
PKKQESEPVRYSGVRDYRS-
----------HPYRSSYGRW
DDEPISRKSYYN--------
--------------------
--------------------
--------------------
------------------DD
PYAGRTRSLFDDFPSSGGYG
GR------------------
SGDMYGGGGGYTGGGNYGSG
NSSRSWR-------------
