>14922.m00063_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MAH
ASTFVLTITSVILTLLT---
------VGNAFFQKKQFYPS
--------------------
--------VVYITKSSPSMA
--------------------
--------------------
-------------VMYVQGL
VIAYMIFQI------IRKLF
F---GELRAAEYEHLSERTW
-HAIMETCL-AFTVFRDDFS
PRFVMQ------------FV
FLLFIKLFHWLS--------
--------------------
-------------EDRVDF-
---MER-----------SPI
ITVLFHCRMISLLA------
--------------------
-----FLSALDSYF---ISH
AYFTTLVRGASVQIVFGFEY
AV-LMTVVLHVTIKYILHMH
DLRNVHPWENKAVYLLY---
-SELLINCLRCILYIIFVAV
MIRLHTFPLFSIRPLYLTIR
----AFHKAINDVILSRRAI
HAMNNLFPLATEQDLLQG-D
NTCIICREEMTPV-------
--SGAKKLPCN-------HI
FHANCLRSWFQRQQSCPTCR
TDILAQRR----TTPTTPAA
EGAAVPAAGPAQARPN----
----------------GGIQ
PANNGGEIPNMFPFMAQFAF
PQHPQQQQQQQPQAGTSTIG
QRNDDGSSVPQMP-------
-------------PSGIGSN
MPQFPATPPGFPF-------
------MAIPPFMVPPVFPF
PPVP-------------SFA
GLTDEEVAAMEGTERAAVE-
-ARINCIRNISLLLDAATMQ
LQQYMSIVQSLSIPA-----
--------------------
----------------YTTA
TTTN-----VDAATTAAETT
ATATETTTLPKTAAKSSTID
ENSAHGLSSDVPVASSSNIK
IKSGKDQPTTANDNTTSVCS
ASTTELDEIRQRRLQKFDHE
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>F55A11.3_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MRV
SAGLMIGGSCVATAAT----
------ILNAFLINKQFYPS
--------------------
--------IVYLSKSNASMA
--------------------
--------------------
-------------VIYVQGI
VLVYLMFQL------LKSIL
F---GDLRAAEAEHLSERTW
-HAVLETCL-AFTVFRDDFS
AIFVMQ------------FI
GLLFIKCFHWLA--------
--------------------
-------------DDRVDM-
---MER-----------SPV
ITLRFHLRMMTVLA------
--------------------
-----ALGFADSYF---VSS
AYFTTITRGASAQIVFGFEY
AI-LLALVLHVTIKYLLHMH
DLRNPQSWDNKAVYLLY---
-AELFINLIRCLLYGFFAVV
MLRVHTFPLFSVRPFYQSVR
----ALHKAFLDVILSRRAI
NAMNSQFPVVSAEDLAAM-D
ATCIICREEMTVD-------
--ASPKRLPCS-------HV
FHAHCLRSWFQRQQTCPTCR
TDIWQGR---------NGAA
AGGNAADAAANVADAN----
--------------------
--VAGAQIGAGMPPFLPFLG
HQFGFPQQPAGAGGAQPGAA
QAGGQPGPFPHQIFYAPAPA
NRP--------EFMNLIPPP
PLPMAGPPGMFPMMPPPP--
------LPQVNTTQGTSSET
PPVN------------PSYS
QLSTEELRRMEGESREALL-
-ARLQAMDNIMVLLESAQMQ
MIQLATVTPIRPRPV-----
--------------------
----------------VPSD
ESEQ----EAPGPSTDQVTS
EEQEIPATSSAPSIFRTESP
STSSTAPSTSSPVTASSTPT
TSSTRTP-------------
----EAEEVRQRRLARLLGE
NANQ----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Mh10g200708_Contig912_55875..58261_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MVRV
TVSFVVIGSFISTVLA----
------VMNAFFLKKQFYPS
--------------------
--------VVYLTKSSTSMT
--------------------
--------------------
-------------VLYFQAA
VFSYLIFSF------IRWIF
F---GQLRPAEVERAQERVW
-HAIMETCL-AFTVFRDDFS
PKFVVQ------------FV
VLFFVKAFHWLS--------
--------------------
-------------EDRVDYM
ER---------------SPV
ITLLFHARILGIIS------
--------------------
-----LLGAIDSYF---ISH
AFFTTLMRGASAQIVFGFEY
AV-LLTMVAHITINYLLHLH
DLRSPHPWEKKAVYMLY---
-VELFTSFLRCVLYLAFAVV
MMKIHTFPLFAIRPFYLTVK
----SFRKAVNDVILSRRAI
NAMNNLFPLATAQDLAES-D
NTCIICREEMTVE-------
--SGVKKLPCN-------HI
FHPNCLRSWFQRQQTCPTCR
TDVLAATRRPNGLLPGHQQQ
QPGVMNGMPANMFQAPFHFQ
FQFGGAQQQRPQQQQPTPFA
QQQQQQQIPPFMPFGFPMFP
PQFFPPMQQQQQQQHPAQRQ
TETQGNGVAGGGSGPGISTN
GPSSSTASSSQQNEANSQGG
NANQNQQSSQLPQ-------
-----SPGTSQQNNHQSQPP
PPFFN----------PFMLS
GLNDAELAAMEGVERRAVE-
-ARIQTLRNIQVLLDAAMLQ
FQQYLT--------------
--------------------
--------------------
----------AFSTTGANPI
QTAETSTNGQSSSIPNDAGC
SNECPSSSSGNEKIGETSKT
KEEATT--------------
-----MPEALNQEL------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Sjc_0049530_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-MRYAILASASLIVSS----
----IVVTNTYYRKKQFYPT
--------------------
--------VVYLTNNQPSLS
--------------------
--------------------
-------------ILLFQCV
VILFLIVKA------LTYAF
F---GRLQRAEVDNLVSQSW
-YAFFDMCL-VFAFFQNELG
VEFLFL------------FA
ILLFVRAFHWLL--------
--------------------
-------------EERVDY-
---MER-----------SPV
ISTLFHLRIMTLIT------
--------------------
-----LLTLVDIYF---IKT
TYWRPASHGISVHLALGIEY
FI-LILSLLSTIVRYILHSI
DSMREHSWNKKATYLLY---
-VDIFIGFIRLAVYAEFTFI
MWSLHPFPLFIARPIYLSIR
----SLKKAIRDVLMSRRAI
RYMNTVFRDATADDLAASSD
TVCIICREEMSLQTDSSSSA
ATPTLKRLPCS-------HI
FHVACLRSWFQRQQTCPTCR
MDVIREAR----LQETHRQQ
PQRSATATTQPDNSAN----
-------------------S
SSSNSTSIPSTAANNQNLHM
PWMPPPNAFPLFPPFMSSTS
SSSTTQAQPIFPP-------
---------------MPPVF
MPPFMGMPIVYPG-------
---------NLFNGNTSMPE
PPS-----------------
-----GLPESTDEARLRASA
EARFTALRQINILLNAAVLQ
MNAYLN--------------
--------------------
----------------AASA
PS--------SESESMTSVL
KADNFESKIEEEKVSSDDVN
SQLGSDDKNIPTSANLELPE
IRKHRLAHFKSS--------
-----PSDINSQSNSELTNE
SK------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Smp_157360_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MTL
LRRLKSNFEFSQGRATCNDL
QMRYALLASASLIVSS----
----IVVTNTYYRKKQFYPT
--------------------
--------VVYLTNNQPSLS
--------------------
--------------------
-------------ILLFQCV
VILFLVVKA------LTYAF
F---GRLQRAEVDNLVSQSW
-YAFFDMCL-VFAFFQNELG
VEFLFL------------FA
ILLFVRAFHWLI--------
--------------------
-------------EERVDY-
---MER-----------SPV
ISVLFHLRTMMLIT------
--------------------
-----LLTLVDVYF---IKT
AYWKPATHGISVHLALGIEY
FI-LILSLLSTTVRYILHSI
DSMREHSWNKKATYLLY---
-VDILIGFIRLAVYVEFTFI
MWSLHPFPLFIARPIYLSIR
----SLKKAIRDMLMSRRAI
RYMNTVFRDATPDDLASSSD
TVCIICREEMNLQTDNIPSV
GTSALKRLPCS-------HI
FHFGCLRSWFQRQQTCPTCR
MDVIREAR----VQERQRQQ
PHRSVNTNNAQPDSST----
------------------TS
GPSDPTATPSVAANNQNFPV
PWMPPANAFPFYPPFIPPTN
NSTTTQAQTVFPS-------
---------------VPPLY
IPPFMGMPIIYPG-------
--------NLFSNGNTPMPE
PPS-----------------
-----GPPEPADEARLRASA
EARFTALRQINVLLNAAVLQ
MNAYLN--------A-----
--------------------
----------------ASSP
PS------ESEPMTSINTAL
NTDNVESNIEEKEALINDVK
PQLESDGKCPLASEDSEFTE
VRKRRLELFGCS--------
-----SGEITSKSNSEPNDV
SN------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>TS_TRISPI_Contig1.c.FG.7_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------MQV
RYGHLLVFSFLLTAAV----
------VFHAFHQRKQFYPS
--------------------
--------MVYLSKSNASVT
--------------------
--------------------
--------------------
--------------------
-------------HIADRAM
-FAVTETCL-AFTIFRDDFS
PRFVAQ------------FT
QLFFFKCFHWMA--------
--------------------
-------------EERIDY-
---MER-----------SPV
VTTLFCARIMGLIA------
--------------------
-----ILSAVDSYH---ISH
AYFTTLQKGATPQIVFGFEY
AI-LLTVVFHIAVKYVLHRV
DLRQPHPWENKAVYLLY---
-FELVIVFLRVLLYAIFICV
TMQLHTFPLFSIRPMYLALK
----TLKKAIMDAVLSQRAI
RNMNSLYPDVTAEDLSRG-D
LNMPTWFAGLP---------
--AGIIQPPAPGVGDGTPSS
INPTVFAGFTGNAQAFPTPP
DFTGLTDEEVRQMEGNERKS
VEARIRCLRNIQTLLDGAVV
LMQQYTSLMSAMDEKRSVNT
EETEHKKETTSKTEEVNAKT
VNIDEMAEKPSTSAAAVAGS
SSGDAQHELRQRRLQHYEKS
AKAAKPQFNQRNAVELLRFS
FTVHLCMNLYNNFCKYNQSS
LCTGLNFFTISAIFSLINKS
PRSFGGTKAGFICSFHQTYT
EAKAANIRCHDNHCFCSLDL
DLWFILITEMQLLVEHLMVD
TVGFVKADDLRKYGKNIYTI
QDVLNEIRDSNTRKKLSTLP
YDLKTVMPDEKAIRFVIEFS
KKTGDYPSLSVTDVKLIAAV
YTMELEHVGSEHIIQEPKVQ
KTSAVGGLKCEDVKGLPGFY
MPSKKKQSDCSDLEEAVRKI
DIQDHSTSEEENSFSESDSE
YDDDEIRDTSNLSGWITPEN
FSSTVGSANDTVPVACLTAD
FAIQNVLLHMGLKVVSVDGM
LIKQLKTYILRCFSCFHMTS
KMMKKFCPNCGNATLKRLAI
SVDENGCTVFHFSRRKFSIP
APKGGKHANNLILCEDQPVS
QNRLSRKARQNLDVFDPDYI
AGQSPFSLNDITSRYSKQIL
IVMFF
