>F59C12.3_wormpep204.longest_isoform.pep_
--------------------
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--------------------
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-----------MYQGETNIL
DSLLKEAQLNPSLKASVMNH
QAQTKSKDDDE-----KRLQ
KMLEKYQLEMNMQR------
--------------------
--------------------
------------ANSRKDLH
GSAGPSPISHSQPCLIASGS
RSS-----------------
--------------------
--------------------
-----------DIPPNESKM
STSAYQRRASASGDQALDVP
TLSQTNRG------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------VSSNQKLIQ
ILREENVHLKKELDAFKRSL
SKLQQIEYSYARLEKEYEYL
ANE-----------------
----RKKQENLELNVI----
-----IQLEKSVKKLTIERD
DLQMRLEKASTEPTMVANL-
MLN-----------------
------------EIQQRQEL
FACKERQKMEIEAQNQTLEE
QRNHIAMLEKALANSQERLA
KREKK----CEELSAVVAHA
DELRK---------------
QLNEVWEEQHRRD-------
------------QMVESERA
QWEMEKTQLRMQLNKDTSLT
GSLKRTTT--PGST-EDLIR
MRKSIQSKDDKIQQLERMVN
DLRK----------------
--------------------
----------THGDKTEQR-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----KSTLATITDN-----
--------------------
-------------FETQVDK
LKEESYEKDLIINELRSE--
---------RDKYAAMVDKN
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------SGD
EALSRMEEIRQKIQERKKK-
--------------------
-G------------------
--------------------
--------------------
-RMGVTGGLSEHARTSSGSL
MQNSL--HRRSSSGSSFDPV
PTAPIPYNMFKNSNNNKSIL
ADNQFS--------------
--------------------
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--------------------
>14961.m05171_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------------------MD
GERRELRSWSIEPRDRRVHA
VSP-----------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MHLQEGRILNSLL
HEARNISTSSNKINAQQVDD
TGIDAAEDTKLQQMINKYQS
QVIQQQLSSRNNHELIKSF-
--------------------
--------------------
--------------AASAVT
AQQQMSPMSHSQPCLITIND
QKN-----------------
--------------------
--------------------
--------------ELVAES
VSPVYHPSPPFDGSEHANLK
AQLIAN--------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------QNLVR
ALQDENSALKQQCDFLTLKA
SRLQQLEKAYETIEKEYENL
TAQ-----------------
----KERQDNLEKAAR----
-----MKMEQQIARYASENE
MLRTKIAELIRRIQAEDQS-
EQINKLNLLLS---------
-----------EIIPQNKEL
MTCKERQKMDIEALEVTLKD
QRNHIQILEKALGNAQEKAW
RREKE----VEELTEKVERA
ESLQK---------------
AVEKSMFDKRSRE-------
------------DEWNRERA
QLEMENAQLKMQLAKESVSV
GVKKGSSA--RNAENDELTK
LKKILHAKEDVIAQLEKNVI
ELEA----------------
--------------------
----------KFHEEMQRN-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----KMAIATQSDT-----
--------------------
-------------LSGKLKK
MEEEKSEKDRKIAELTEEKE
RLS---EKLEDERKSSESRT
SLLEREIDRIRNTDDR----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------------RFR
EDMARMEQMRLKIADRRCFT
TERSRNRCVH-----HGRTS
SGTRAGLVHIHLR-------
--------------------
--------------------
-ANSATALLPTDLHLSSPDA
LPTSA--DIPLDLSNDSAIS
AVTSAAVITATRSTSKALTT
FPHSSSCQEEIFADQN----
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------CVSDA
KEVYGTNLNGYKRPISIPPH
YDLAFSGSEDLYSKISNRST
AKSDTIVGATITNEELCGK-
HISTEEIWDV----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
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--------------------
>Mh10g200708_Contig213_110223..114179_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MVPPPELTLQGVL
DQMNNRFDQVNNRFDQVNDR
FDQVNAAINILSASCLDLAL
RVHRLEIHAGVPHHLEIHAG
VPAANDGGNNGDGAENNVGG
DGAENNGEDGAENNVNEDGE
NDDDQLNDMKGKNNS-----
--------------------
------------SIASSWPI
IVNEHALN------------
--------------------
----EASILPHLLHEANEQA
QQQVNETTETMQENEEACDE
DQLQNMIENYSKHVIKQTQN
Q--QKQQNKKNSFTNAERS-
--------------------
--------------------
-----------TSHLQKRIT
GPQQQTPMSHSHPCLFLDGT
KSN-----------------
----------EDNTKRLDN-
--------------------
------------YAQQTPTT
TQIPFKSNLYKSESDRTEKT
STQQIDENK-----------
--------------------
--------------------
--------------------
--------------------
--------------------
----------FLNGIQQNND
QNSANLFQQKQQIEKLQRKC
NRLERLESAYRKIEKDYEQM
LCQ-----------------
----QERREELSKIAI----
-----QKLEHQLRVLDAENE
HLRAQNANIGAIFGVQKPG-
DVNNDQQIHFLLN-------
-----------ELIPKNNEL
LVIQERQRLELDAQSATLEE
QRTHIEVLEKALANAQERLA
AKERAT----IDAAAVVDKC
SHLQR---------------
ILQEALEDKQRQK-------
EQHGRQVAQLEMELTQLRLQ
LAKENNSQAIGSLGRKGGAM
TAAGANNN--TPEATDEMLK
LKKELNQKEERISQLETSLL
QMQR----------------
--------------------
----------RFGGGEHQKL
KN------------------
--SGNEIEAMTIRWEIEKAE
KERRIQELLDDKMR------
--------------------
--------------------
--------------------
--------------------
----IQMQWAEERRS-----
--------------------
-------------LDVRVRM
LEKDLRHFMGSQSSLASSGG
AGSGIGGYYPTELNEHNSPF
SSIRGSKFYHQHRSTAELPT
SARG----------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------ATLYDERIASQ
DVMARMEELGRKLAGKRNKI
IERPPTLNIQRPSNLQMNRV
PGDLPSPQRQQARSQSRS--
--------------------
--------------------
--SSSEQPLAQADISPGSED
QTSNG--GLYRQSAPSSTGS
SKKRYLVNASASQLNAYLEQ
LPEATKRRLAGDRVSSGGFH
LMAGIERNGGVSNRREGGCR
RLLRDHSVETRKG-------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------NIGTELVAP
PPPPNYQEAAQQRRETQPPP
PYQGHQQLRQMHQMASIEEP
GQEPPPVPPMPAYIQQQQQ-
RSGKTVNVVEIKEEEGDSDT
LTGHKQLVFRRSSLGNQNLI
EK------------------
--------------------
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>Mh10g200708_Contig213_114030..110437_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MVPPPELTLQGVL
DQMNNRFDQVNNRFDQVNDR
FDQVNAAINILSASCLDLAL
RVHRLEIHAGVPHHLEIHAG
VPAANDGGNNGDGAENNVGG
DGAENNGEDGAENNVNEDGE
NDDDQLNDMKGKNNS-----
--------------------
------------SIASSWPI
IVNEHALN------------
--------------------
----EASILPHLLHEANEQA
QQQVNETTETMQENEEACDE
DQLQNMIENYSKHVIKQTQN
Q--QKQQNKKNSFTNAERS-
--------------------
--------------------
-----------TSHLQKRIT
GPQQQTPMSHSHPCLFLDGT
KSN-----------------
----------EDNTKRLDN-
--------------------
------------YAQQTPTT
TQIPFKSNLYKSESDRTEKT
STQQIDENK-----------
--------------------
--------------------
--------------------
--------------------
--------------------
----------FLNGIQQNND
QNSANLFQQKQQIEKLQRKC
NRLERLESAYRKIEKDYEQM
LCQ-----------------
----QERREELSKIAI----
-----QKLEHQLRVLDAENE
HLRAQNANIGAIFGVQKPG-
DVNNDQQIHFLLN-------
-----------ELIPKNNEL
LVIQERQRLELDAQSATLEE
QRTHIEVLEKALANAQERLA
AKERAT----IDAAAVVDKC
SHLQR---------------
ILQEALEDKQRQK-------
EQHGRQVAQLEMELTQLRLQ
LAKENNSQAIGSLGRKGGAM
TAAGANNN--TPEATDEMLK
LKKELNQKEERISQLETSLL
QMQR----------------
--------------------
----------RFGGGEHQKL
KN------------------
--SGNEIEAMTIRWEIEKAE
KERRIQELLDDKMR------
--------------------
--------------------
--------------------
--------------------
----IQMQWAEERRS-----
--------------------
-------------LDVRVRM
LEKDLRHFMGSQSSLASSGG
AGSGIGGYYPTELNEHNSPF
SSIRGSKFYHQHRSTAELPT
SARG----------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------ATLYDERIASQ
DVMARMEELGRKLAGKRNKI
IERPPTLNIQRPSNLQMNRV
PGDLPSPQRQQARSQSRS--
--------------------
--------------------
--SSSEQPLAQADISPGSED
QTSNG--GLYRQSAPSSTGS
SKKRYLVNASASQLNAYLEQ
LPEATKRRLAGDRVSSGGFH
LMAGIERNGGVSNRREGGCR
RLLRDHSVETRKG-------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------NIGTELVAP
PPPPNYQEAAQQRRETQPPP
PYQGHQQLRQMHQMASIEEP
GQEPPPVPPMPAYIQQQQQ-
RSGKTVNVVEIKEEEGDSDT
LTGHKQLVFRRSSLGNQNLI
EK------------------
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>Minc05468_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
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--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------MKGKNNS-----
--------------------
------------NIASSWPI
IVNENALN------------
--------------------
----EASILPHLLHEANEQA
QQQVIETMEE---NDEICDE
DQLQNMIENYSKHVIKQTQS
Q--QMEQTKKDPLKTAERS-
--------------------
--------------------
-----------TSHLQKKIT
AQQQQTPMSHSHPCLFLDGT
KFN-----------------
----------EDSGKRPDN-
--------------------
-----------LPQQASKTT
KEIPFKNNLYKSESDRTEKI
STNQQLENE-----------
--------------------
--------------------
--------------------
--------------------
--------------------
-------NKFLNGIQQQNND
QNSTNLIQQKQQIEKLQRKC
NRLEQLESSYRKIEKDYEQM
LCQ-----------------
----QERREELSKIAI----
-----QKLEHQLRVLDAENE
QLRSQNANIGAIFGVQQKTG
EVNNDQQIHFLLN-------
-----------ELIPKNNEL
LVIQERQRLELDAQSATLEE
QRTHIEVLEKALANAQERLA
AKERAA----IDAAAVVDKC
SHLQR---------------
ILQEALEDKQRQK-------
EQHGRQVAQLEMELTQLRLQ
LAKENNSQAIGSLGRKGGAI
TAAAGCANNNTPEATDEMLK
LKKELNQKEERISQLETSLL
QIQR----------------
--------------------
----------RFGGGIEQQQ
QKNLKNCG------------
--GGTEIEAMTIRWEIEKAE
KERRIQELLDDKMR------
--------------------
--------------------
--------------------
--------------------
----IQMQWAEERRS-----
--------------------
-------------LDVRVRM
LEKDLRHFMGSQSSLASSGG
AGSGIGGYYPTELNEHNSPF
SSIRGSKFFHRSTAELPTSA
RG------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------ATLYDERIASQ
DVMARMEELGRKLAEKRNRI
IERPPTLNIQKPSNIQMNRV
PADLPSPQRQQIRSQSRS--
--------------------
--------------------
--SSSEQPLAHADISPGSEE
QPSNGSTPLYRQSASSTSSS
SKKRYLVNASASQLSAYLEQ
LPEATRRRLAGDRVSSGGFH
LMAGIERNGGVSNRREGGCR
RLLRDHSVETRKG-------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------NVVTELAAP
PPPPNYQEAAQQRRETQPPP
PYQGHQQLRQMHQMASIEEP
GQEPPPIPPMPAYIQQQQQQ
RNGKAVNVVEVKEEEGDSDT
LTENFTAT------------
--------------------
--------------------
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--------------------
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--------------------
--------------------
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--------------------
--------------------
>TS_TRISPI_Contig1.d.SNAP.259_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------------MRVY
LTVLMLSYLMMLMVHRNVMS
SPQGGADSNSLLSDANQEQQ
WTKIYNSQCSRALGSSTQIS
PVSLRTGSSSGGLHNLTSMH
HRQTVAGEAGRSTVHRSPES
RAVQAVSPFGVREPN-----
--------------------
----------MPTSIPDECQ
LVREAVSG------------
--------------------
---QWNSYASTSTSSIGSGN
TSLNIVSSASSTNSNLYRTP
EHALPPSYASIFASPSPSGE
TTGKDQAVKKTSLSQPDVS-
--------------------
--------------------
-------------RAPYPLL
MSTSTNEISAKSNLCQQLVM
HLK-----------------
------VSGQEDSAVSNYYS
SRHHSEP-------------
-----------PSSYLGARE
VTTSASDIAGGSESNKLLKD
EQIDSNNSD-----------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------DAVSTKMIQ
MLKDENRYLRLELEGYIKKT
FKLQQLELQYQKIYREYEEF
VRR-----------------
----QDKREQLEQQMR----
-----SRMQLEISRLKDVNL
QLQDQLENTLHQISYYQAEE
IEDSELRHEITRR-------
------DMMIAQLITQNKEL
LATKERQAIELDAQRVTLEE
QRTHIQILDKALTNAQEKVL
KSEEVMK----KKQSYMQKA
DELQR---------------
ALHALQEGMRKRE-------
-----ENHKRVKAELEKELA
YMKIQKKENLQMKSTSRSLQ
DLENTIST------------
LRKELQEKEEQILNAQTELV
HWQE----------------
--------------------
----------AYYVELKKQ-
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----EAAFSEASDS-----
--------------------
-------------KDARIRV
LEKNSEKAEKLIETSQSETK
RFLDDLRMAKGKIGEMETKY
ALIQQLEALLAEKEAMIN--
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------VLRRRQQLSTD
PDAAGSDSNALATTATTTTT
YSEVSSLDNSKQRLEAVRRR
LLQSPSPSRCYARLYQKHN-
--------------------
--------------------
KFISVDSSFNFDDLDQPARY
TSSLG-RPMRTTPRSALRSK
SSTRTQASCDAFSPASPLLD
LKQHLKQQR-----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----------HIYTLPTRR
KATDLLTSSQRDRPRSADDH
LLSEGTSLKNYQTESATIIP
GLRKNVKAEKSNNNSTRSYA
AFDKKSSSSPDDASDEELWN
V-------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
