>Smp_169360_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----MMQSHSEDHHQSVNNR
--------------------
------GEINPSIVNTHQRL
DNEINETSQDQNIEQDKIVH
QLIQSNKGSKINQQPSVTQI
STAASFFTRAGQKLTITNNS
KRKRKILPNDITDINHLSGH
NTSTLYRYNQQSKCLTGFSE
VIHHHPPPMPPTL----LKW
SRNGTNNSALNIKTSKAELC
AFALTDIIQSVVNGSDGCLI
SFGTRDSIKS---NSMFGDD
KQS-----------------
-SGLGIIPSAISWLFRLIT-
EQKERTGARFSVRISAVELC
GKEEALRDLLSSVSN-----
---------RRQGLLGHQYD
---QDDNQKARSRLGKPTSG
ASMDTGSEAS----------
---------SGSKVKQFEGQ
QSHDSPVGSSVGVR-----R
GSGG-AESGS----------
LGHSGSHTNSG---------
--------------------
--------------------
-----DHCSPHAVHSKERKR
SAPRTN-VYAWPRNAVKNAI
ETLSTQKEQ----WVDGPKS
D-------------------
-------------------F
HPSN----------------
----PSHQASQTTTNAVAKP
SMIDKETQVDELTKTSAQVI
IPPQLSSQEE----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----QHSISANCT-------
--------------------
--------------------
--------------------
--------------------
--------------------
KTHQKVPGKDHFEQTADELG
KTE-----------------
-------QDKQVQNIQKNVS
----VKPVALERSNITSKSN
KMSQMERITDHCPNNGDRAN
TEYICGKTYC----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-----
>Sjc_0045420_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MFGDD
KQS-----------------
-SGLGIIPSAISWLFRLIT-
EQKERTGARFSVRISAVEVY
GKEEILRDLLSSVSNTTDAA
GANAPGIYLREDPISGTQLE
----NQSELRAPTADKAAFY
LDSALSARCQPTLFDSSPTK
SPTTPSSASSSSSSTVLWNR
TSHLFFTLHIYQYR--VERS
GIGSGVAGGR---SRLHLID
LGNTKPSKDATSNISPDIEP
EESENKQNITSLNDSVLSLS
----SMISVVLALLNGNR--
-HHPHRDSKLSQMLHEAIGS
IGCRTC-ILIQTSPNINYYH
DNLQLFQFAAKIQRSRRHRT
HERTLLGSGLNNTEVSCKVD
DQNTSSEDSSSCDSFGLRRA
GRLRLNMGLHLAMKRSNGYK
GFSTKYRHYGPDNLLSKPTS
SEKDYTSSSEQSCDTVIYLG
RQGLLSHQHE----------
--------QNNNQESRSRLC
KPTSGLNMDTDSEAGSGSKV
KQFG----------------
---GQQFHESPVGSSVGVRS
GSGGAESGSGGHSG---SHT
HSGDHCSSHAVHSKE-----
---RKRSAPRTNVYAWPRNA
VKNAIETLSTQKEQWVDGPK
SDFHPSNTSVTSQTATN---
--------AVSKPSMIDKET
QVDELTKISPQPT-------
----------SHCQISSQEE
HHSSTVNPTHIHQNITRKDS
VGQK---------------T
DELNKTEHDKEMKNISKNLS
----TKPIVSDRLTITSKFN
KTNQIEQSMDYCTTSGEMFQ
EFISASYTTHILCLSSSKQE
KKRKRVIEFHGKTEFTKPED
KLRLNTSSSETFSNALFGNV
TIPPKQPFINSLHTSSNFAR
IAAWVKSVSVETCSTQESSL
NKSDESNIMIRPHDSPATIC
TSIN------------NDTF
NQNQQCYCCKHVENEIMFSG
EKHLIHHHLNRSKTRNYENA
IIQNMQCMGSSKLRRGRSVP
PDTIQENCHPEVSHLHNKPT
KQDS---------ITISERT
NAPLPNSISSGPLCEKEEKS
NICRKSDRDTPSSRRPDGSS
NPHLHKESLGTSDIQNAVSS
ENKIQHTSGIFGEKSLQQAN
GFWASAKKSHPTSTRLFPGE
NSGFSSTTQYSNTHVKTSPL
RKKCFSPEAKKKS--GKSHH
DTESHLLVCTSPKSTKYHRS
QSFTSSTESEHSFDRNNQLL
DNSAIQKSDYPQNDDSIGTK
SNIL--QTVVGKKSSKENRT
KTGKGRLSFLTSPLFGKRKE
KEIKLPETTVVNDPQHAIHQ
SVKNSDLRRKPQTKDSNHSH
QNNISSSQVEISESQTRIGC
IRKDKSKHMQPEKQNNXKCD
VINETRSPADGKRSS-----
----ESGYSVSGYRKVENKE
TDELDKQCDDGKIFLDSFET
SKMSVSIPSSNISGSGPRRG
GGHASSGYESIVRDSEASSH
ADSTSGSSAGGTGVITGDVK
KNKTVPQKHCNIQEYCEHCH
RINQTNLSLDDRITEPQQVK
HSVSVTSYSKQELDENEQCT
HNKSQKTQSNLQNLQILHTV
KSSSIINNQ------ESLCQ
TFQQTHLTSPSKQSSQQRSS
NSKSSATSKTVTSQSLSSSS
STSHRSRSAPPCSEDTSEET
TSSRVSVRYVSN-----KTN
ENLSSQISTNVNNCVPENSS
NVSCIHP-------------
-MYAEEVQEMERQIRYEKTY
DLLAQQDMLKMELMTAKDRL
LIDPSTW-SFDLYVAEQMDP
DDPNFLEALEKETESLRKRV
DACKSHIMLITCFDSQFKSN
TINRSNDNRTINITYTNTHL
N----
>Smp_169370_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MAGSL
MNQ-----------------
-SNLTVETGDLTNVIPIGNN
IQVVKPQSLESWTVNNSNNH
ELNKQTNYILHTSNQNQMTN
VN-----PIMKQSSNECHLT
KSFMNHSDTNAPIAKVKPFV
KDWIQKHSTLP---------
--------INTNMHEEFTKT
NEHHQLQLMKSDEN------
ELCTVINANLN----MALGE
IGNEGQSIR-----------
--------------------
------HHIFHGKTELVK--
---PEDNSCSNISNSKILGN
ALFGNV-ALQSKQPFINSLQ
TSSNFARIAAWVKSVSVETY
N-------------------
-----------------TQE
SGPNQSVESNLIIKPRESST
NICTTTKHDTSAHHQTCYCR
NNLENETLFSGERHFIPHQM
TRSRVCNYEN----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------AIIQS
SHYIKIGKLRRGRSVPPNSI
QEG-----------------
-CHSEVPHSFDEYTKQDSVT
----TSERTTAPLPISASSG
PLYGKEEKLNICRKSDRDIP
SARRPDGSSNPHLHKEPQGN
SDNQNIVSCDNKTQYN----
--------------------
--------------------
SDIFNEKLSHQPTGFWASSK
KSHFRTNTKPYHEETVGFSP
TTTN----------------
--------------------
--QYSNTHVKTSPLRKTCFS
PETKKKSS------------
----KLHQENESHLLVCTSP
KSSK------------CQRT
HSICSSTESEHSFNKNDVFL
DSCTTHKSDYAQNDDSIGTK
SNILQTPVGKKSKESRTKTS
KGRLSFLTSPLFGKR-----
-----------KEKEVKPSE
TGVVQEIKHVGHQTLKNFDL
RRRPLTKDSDHSN-------
------------------QN
KHSSSQVDTSESQTRIRCIR
RDKSSSKHIQSEKQHNSSKN
TLLS----------------
--------------------
-------------------N
AHAGTGQRCHRCLQSSHACR
PDHHNNRKCEAVSETRRSAD
GKRSSES-------------
--------------------
------GNSVSGHRKVENKE
TEEHDNQCNDGKVLLESFET
GKLSIGIPSSNVSGSGPRRG
GGHASSGYESIVRDSEASSH
ADSTSGSSAGGIGVVTADVK
KNKTIPQKHCTTQEYCEHCH
RINQTNVSLDERIKEP-QVI
QSVNTNSCCKEEQDKHEPSI
QSNSYKIQYNLQTVQRLHSS
KIDSDVNNQ------ELSCH
GFQQVHLTSPSKQPSQQHST
NSKSSATSKTVTSQSLSSSS
STSHRSRSAPPCSEDTSEET
TSSPISVRYVSN-----KPS
ENLSSQISTNVKNSVPENSS
NVSCILP-------------
-MYAEEVQEMERQIRYEKTY
DLLAQQDMLKMELMTAKDRL
LIDPSTW-SFDLYVAEQMDP
DDPSFLEALEKETEILRKRV
DACKSHIMLITCFDSQFKSG
QLSNIEFSRCVT--------
-----
>TS_TRISPI_Contig5.b.FG.59_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------------MCSTC
IELSEDEFVVFRAPWPASFD
FVNPANRLPFALHESLAIFS
PSKLPCPSSSSSSSLPLTSR
NKQSSHGRYGRSVSKRATDG
SSQKTTTFGSNRNSRFNFGR
LLRNSPPPVPPAL-------
LRLLGPAAVRKDSSNKSEIC
SNVLFEVIQTVIAGEDSCIL
SFGHTGEGCCN--STFIGED
HDV-----------------
-HQVGVIPSAIAWLYRLIG-
EQKQRTGARFSVRVSAVEIS
GPNEEVRDLLTN--------
----KGAIVMDSALTAAHL-
---QNASELRAPSLEKAGHY
LDTALSLRKFILN-------
IVIISFLLYGCHLDTEEERR
NSHLIFTLHVYQYR--VNQD
GKGG-VSGGR---SRLHLID
LGQGEKCTKPNRTSLTLP--
--------------------
----AIGNVLLTLLQGQK--
-HLPSKDSNLTKIFKETIGS
SQCKFVSILACVSPDSCRYM
ETMNTIQIISRLHRLKRTKK
T----------------PFG
VGLNSSSGGDSSCEERQRRV
IRRS-----------ISDPD
CTTSSSEQSCDTVIFLGTPG
VPFVAEPSAASTAAHSHSSS
TRIPKPSSNS----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------TSTTAPKRPAH
FLN-----------------
----------NLICAGPAST
MTRIKQSKRERVREWIIRQE
TER-----------------
-LVNVGSGAQPLITADEGLL
S-----RSNVEEWNVQLTRS
SLYGSPEARYLEDIVEVEED
SSSEQYSSNVHVPVEHVGDH
CQKTKTLLHGITESIS----
--------------------
---------------AAFSD
SAGRLRILSTDDVDTRCSDS
ISLCTASALADPVDEDVPSL
SSD-----------------
--------------------
-EDLELAMQASLSLSSVRS-
--------------------
---LDILQKLKAERAQQVLL
LNTP----------TQQPKP
IAVGADSFSIGQQQQQQRLD
PEGKERFACFEESSSMPTTT
VEKSHMPVPIPVSQSGLLDE
VEKRPSVVPTTFDVG-----
---------------CCRGI
GGDNRMPPPTSGSYRQAIDL
FEPVVCSGKGSKS-------
--------------------
---QQLKFSQSISTRLKNCN
SNAGGESKLPKLNLAAVGKA
IKEK----------------
--------------------
--------------------
-KSDPCHQVRVKSPLHLLLA
NARVPKFTARGSHSPSQRTS
SGYESGG-------------
--------------------
--------------------
--------HDSTVGLIVSPC
PKQLTQPCRASLVVARSTSS
GRGSDNSSTPTSDSFIRPPR
DVIGRGFKSAPQSPGSPSNK
GIFGLPSSLLRPKYFLSSRS
SSLTREEMEKSKAKIDQLKA
KQEALKVELRKAKERLGVPE
SKWCYDSKLLFTNAHASRIY
AYFCMMIPVKKLISCIVMLG
DGAIAQAVLSRQQAGNFVTV
NVAYALALTFAIYVSGGVSG
GHVNPAVTLALCSIGACSWH
MLPAYWFGQYLGAFIGSSIV
LVLGTAILLMVIVAVTDERN
MEVPKAIAPVLIG-------
-LAIFSVASGFGYNCGGAIN
PARDFSPRLLTSLTGWGSET
FSVRNYWFWVPIIGPHIGGL
IGAALYKLFVGIHWPPVHEI
TMISSQISRNEHIGLS----
--------------------
-----
>14963.m01803_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MPYDRPDSLSVRLS
SPNKLASLGRNHSERNQAEE
IPLPPALHRFLVAPTTRSPS
SPQLKTVLRLADEDLENVTV
HGNSFVFRCNQSGISKSFS-
--------------------
--KYTFDQIFASDATIQQIC
SVCLPDLLQTCFSGSDACFI
YFGAVSKAKNELLYSQYGRQ
DFAAVSSANTTSDLAGPSSG
IQYPGIFPSALLLTFRLISE
LRQRRPDFHHSVRISALYYS
QRRNLLIDLLASFILPVTSH
DI----VTIREDSVLGIKI-
---ENHSELRVDSVKQAMLM
INDVIQARITG---------
--------------------
-NSLKYLQFKYKKN------
--TSQLIGGR---SRLCLVD
LGLGERTSKGDVQAMTMP--
--------------------
----VITNLLVALFQGQR--
-YLPSRQSPLCMLLKESLGS
AQVKASLLFASLSDRVSESE
NILQMMSKIQRAAKPRKTHR
IG------------------
--------------------
--------------------
---SDSSSSDSTRRRLATNS
EGNSSSEQSCAETVIFLGPS
VRIEPTAEQQ----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------QPKRRTN
GNTIDSAKRKMILDWIKDTQ
ESS-----------------
----YSQPAKISVYVQCNED
-----DIDMENLQQYGCRRQ
LDDILEDDEEASGCHSPRSL
PTTEQFLESFQNIGTLQQPL
SILSLDKISASTSGK-----
--------------------
--------------------
-SASENEVEDDDLERAMAAS
ISSIRSHEILSRLNDDLSEI
HSEN----------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
---------ISESDSSLSGF
YRGIMKPEAYTEE-------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----KMLQFTETYEKKKKKK
LVPLSCCRSSMLSSGSSGGY
GQPNSFA-------------
--------------------
--------------------
-----------ILKTIEKQD
TNENNQLKSGTFPPPLLDQS
------------MVIMKNSN
SIPMSSTTTVPRSSTHPLNN
CLAKNNRSEALTKSKLPRRT
AENKVSPEKQPMLLERTPXQ
YFTNKSSRRDSLDSKKEAKK
GKRIIERRNSSDANQRTTTF
QDTGAYSSGHGSDENGSIYS
RPLLTLLSPRSNRPRNRESF
SASSGYESATGVDVVKNYGS
LSKRRLFEVSRTYSSN----
--------------------
--------------------
--------------------
---------KHSLLMDKRVN
LIIRRQNHLRDDLREAKRLL
GVADEHF-----LTASTSSL
QGTTLLEALTQETRILEKRL
IACRNHAMIVTCLL------
--------------------
-----
>K12F2.2a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
------MEACSSKTSLLLHS
PLRTIPKLRLCASISSEDVA
HGRCSLTDQHLQIEGKNYS-
--------------------
--KTTFDHIFRTDATQDDMY
TAFLSDTINSVFAGNDATVL
AMGAKTNGKD---ERLYGNS
VSR-----------------
---NGLVQMAITQLMNALD-
-DNKDSEERIQVRMSAIMVS
QNESSIVDLLSPFNPDPRHR
VV-----KIVDDARTGVFID
----NESEIRVETIDQALFY
LNTAVDHRMIQ---------
--------------DEHTHR
TSHVFISLSLYSYK------
-MGDKMQGGR---RRLCFLD
MGIGERNSTNGGMTMPALG-
--------------------
-------SILLAMVQRNK--
-HIPSRDSSVCQLIRCALST
SRFTTFVFSFGAKSDDNENI
AHLACKIARTRAKSMVGHGR
K-------------------
--------------------
--------------SSGTMS
TGTMESNSSSCGTTTITPGG
TPRTQRRFELESGSELSAAE
TVIFLGPNSS----------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------RTASPA
STTMPFTPTSIRPLHRTTRN
HSG-----------------
VEALSKPLSVETKSSPTHNC
HDGCIHSIPPMLRGHTPFLS
ASLKLYDELCSPPSSSRASP
APPAAFGGKTSEKREDFGIM
IAQPSIPLMKAKSKYN----
--------------------
--------------------
--LDDGKMKQIMQWMETSEA
PPILFSSPCYENSATSVEEL
RECVG---------------
--------------------
--------------------
--------------------
---------ILSHPLEDIIE
QEEE-----------SMRTS
TATTGGSKKDHPLRILSKQD
LNVEPEIKDKQEENELELVM
AASLSSMRSHDILAKLEAMR
NAQNGNSVQNIGNSQ-----
--------------------
--------SNTDMDVSEMDV
YRRASHLEEYAMQ-------
--------------------
--------------RVREIE
ENKLKNKKKIKLGLNCCQQQ
SMIS----------------
--------------------
--------------------
-SGSTVVDWSQIERKKEKER
EVHEEEMRKEMLRERRAKLK
ITELEIK-------------
--------------------
--------------------
--------RERNLIDKELDD
KKGIANSIARQLQHFSLSPC
R------------GGRTHRS
VSTHRIDPPNASLPSTPTMS
HKKVIGGSLAKLSASGASGS
TGAPPSPALGYHQSLPRHSK
LPTSVNGRRASAERERKSNK
ASRNSCSKERKISGS-KEEL
QWRSPYAQMTSPKSYGGPGT
SSSGRGSSAPGSDFETPVVS
TTEKSANGTIPRSKRQSYSA
SSGYESANDYHIYSTTNKKP
HILDK---------------
--------------------
--------------------
------KRNEEKLSLVRQAD
EIRHRQWQLKKELEEAKRAI
GQEDDAKMIANSSDQRLNGL
SRTTMIDAMLQENRILEKRL
VACRNHSMLVTTFI------
--------------------
-----
