>15032.m00059_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MQASTKSPNS
TSSRHLHLSENSPPNHHHHH
HHQHQHQQQQQLQYHYNYHH
HHHRQQQQHHQSEGATIKQH
LKKSSGSGSGSNNNNNNDDN
NNSNDNNSDNNNNGTTNSSS
--------------------
SLLRMDESSGIIGISGGDMK
HGMTTATEGGEGGGRGGGGG
GGGGGG--------------
------GNPDNGFNNISSRK
SIIICK---------EQQQQ
QNANKKK-----QLNGKEIE
ELTIG--------LRKLNLT
KENTLVEQFITSNFED--GE
IGGAVGQMLVHFSIEE---N
RQAGKAVARIAAQLLNFDTA
N--VFHQGITVALMHYFECR
DRLRIDHFRVWITFLNFVSD
LYASVGYIYEGELVDLVFRI
FGYLLKAPILDTL-KIEELE
SLIGCLLSVGYDLERQCPEQ
LAVLKDLIRDAFIEVQE---
--PWARKMILLLMELGASGW
KL-PPEANEYYFQHTSS---
>F44A2.5b_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------METLQTENQLIGE
LKAPATTKKPTNRPAMQIYR
PPGLRSD-------------
---GSSSTTAVTTTSSTKPK
PAAGQKLSSSECDTNVNSQI
LKEENNNKKDCGESTSSRAS
--------------------
SRASNHVSSDDRHSNGSLKR
TESSLSSESTPSSQKSYGSN
SNKLNG--------------
------QHVSGGAHQQYNKR
IN---------------SSK
KENQKKK-----VMSEHEIE
KAIT--------ELRALQLH
SHSIQIEQWIGGAFCD--EE
LAECIGSALCRHAIEG----
-GGGSGVGKLCANFKYAPSI
G--SFVKGLIIALSQYLECR
HKIREDHFRMWISFIQFLTE
LYSNLGSDSKGELATIVFDV
FNYLLRPPILEHV-KIQELE
CLISILIKGGYDLERECPDR
LALLKDLIRDAFIDVSE---
--PWARKMILLLLELGASGW
KL-PTDANEYYFNETSN---
>Mh10g200708_Contig772_10241..11705_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MSEQQLF
IKKSEKEKIQPSINFDD---
--------------------
--------------------
----LINNLLLFLSNDKQNG
NEIGN------FLILNCSPE
MAKYVGIFIIKYLAEDCFKN
NKKYFKKGILSKL------E
SILSILMIIGNRLELDYPLQ
IDELRILLRNASLNSKE---
--SWARKMFLLMVELSTVGW
KIVPQIEEFYYTIN------
>TS_TRISPI_Contig2.b.FG.14_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------------MRKNDIL
TKS----------MENIEDT
PSSTVTKAEKKAELNETETV
VQFRRSKTVGKSSNRLSVPC
FFPASAASASAAAELKGNG-
--TVIPKEAPLQSVIAKRCH
ASVKDLSKRKELNDADFKKI
EEFFNSLHLAGDLVNVVFRV
FNYLLVPPVLDAI-KMEELE
CIISSLLNAGYSLERQYPDR
LIDLRNTFRNAFLDAKEPWV
RKVNEKKQNCVLIQNINYSM
LLDDPAAHRAKCRQLATE--
