>TS_TRISPI_Contig0.e.FG.59_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
---MSANAETLVSTIASYRS
APCGNFVHNS------ATAG
QKKPASSLIRWESKQWFSVL
ELQTELLGRLDAEENQAPVV
TSAEQAEQKEVP--------
---------------ATEVV
VKKKKSVTFADEFGCQLVTI
RILTEPS-EYVPPNMPCFGA
KLATQQSEQCTESNRPTTLE
RDNHAA--------------
-----------------VGG
SSWVLNFSQPASDYAKFRHK
LNQ--NNVVLENVLLRNDIQ
-------SLHGTVKVKNLSF
EKEV------YVRCTTDEWA
TFQDHPATFLCNTGGIFDTF
LFDFEIPLDD-DTIQR---I
EFCISYRVAGQ-------QF
WDNNDNANYELISDRLRKQR
LVD----RSHIGDEPNRRGQ
TNCGNALHPNSTSQWSEYLN
WAHVSSPLHYW---------
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>14972.m07120_BMA1.short_headers.longest_isoform.pep_
---------MQCAVRSDLSK
DWLRDDLRSV-------GSD
PSSSILCPTICRRAASFPIV
SRHHPMSSLLRVRSQSESDA
LNRLGVINSR------TTLT
EQLKKRQLIPITVEKSLDNA
ESIS----------------
-QGESNANLDYKNFVDSNVD
DFDQLAVIVENVVAQTEKVA
ISSYKSVRFADDCGKDLTTV
RIISEPSD----YPP-----
-----TISASVIRRLLGETD
ENKKSS--------------
-----------------QVS
GSWVISFKQPASEYVKFRET
LER--GFVALENVVLKNEIC
-------HMVGTIKVKNITY
EKKV------FVRFTSDGWK
SFLDRMAIYQPSSSKF--YD
TFSFDVELPT-NGYNPNARI
EFCICFEIGSSQGDTNQQQF
WDSNNGRNYVLISQEAQTPI
SP-----------LPVSLSF
GKHDPNDAYTYEFDDWTKFA
AWKNLPTDSPYW--------
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>H18N23.2b_wormpep204.longest_isoform.pep_
--------------MLIDSF
EDLDGVIQEI-------KFR
LTRAPMEMGRERECCVLSTS
PGCRRAASFPFVGDSSIIQA
SSLKVRSKSE------SEAL
NKMRLTQMNLETVRKRLSES
TIKEKDE--------GSDYQ
SHSSSSSECEVDDLELFCAG
-------------PLELKEE
EKLRKSVRFADDCGHELYMV
R------------VATEPSN
CPPKLSPSVLRRYRGESFEE
EEMTTR--------------
-----------------EPA
PVWNLMFKQPAADYVRFREN
MET--NKVSLENVILNNEAY
-------KVMGTIKVGNIAF
EKSV------FVRYTMNGWI
SYMDKAAIYQPSTSKI--QD
TFKFDLDL-P-SSVEKIHQI
EFCICFKANGT-------EY
WDSNSGTNYVLHCEQQQHPA
VP-------QQRRASLFGSS
KYLDRDDAYKLDYNDWGKFA
SWKALSTDGPYW--------
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>Mh10g200708_Contig775_19181..20742_M_hapla.pep_
MEMPPRTQLINYRPLIEPFQ
HDINSTTITN-------PIP
ISQGRNNQQNLFHSFSAPLT
SGFLEHFCALHLIPSSINSF
VDKNDWIKNDNGSRNFIRSK
SDSAALDLVVEKLRPKFTPF
PSPFASVDSICGLLAKNETK
QLTQSSIDDVPPLIEEEDDD
D---------FITLPPQTST
RRKLRNVRFADECGFRLSTV
RVMTEPS---------DYPP
KISPAVLRRIKLAAMQSEDS
NRKKCDGWNSDGEEEDSDDD
DYEEFEGLG---EVKRNRRR
CSWKLCFKQPASEYLKFRDT
LDR--LKVALENVMLRNDLG
-------RMNGTIKVANIAF
EKNV------FVRISSDRWS
TFRDRPAKYQCSPSKAFDTF
RFDFDIPR----DDKPDSRI
EFCICYIANNT-------EY
WDSNDGKNFVLVPDEPFPLL
IS-------------SSQHF
KDIKVYY-------------
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>Minc10477_MiV1A1.short_header.longest_isoform_
-MSPRSTQLINYRPLIEPFK
HDINSPTITTNSIPIAQGGR
NNNNNQQQNNLFHSFSTPLT
SGFLEHFCALHLIPSSINSF
VDKNDCNRNNNGSRNFVRSK
SDSAALDLVVEKLRPKYIPF
TSPFASVDSICSLLTKNETT
KQSIQPSVDVAPSLNEEDDE
E--------YDFILPPPQTS
RRKLRNVRFADECGFRLSTV
RIMTEPS---------DYPP
KISPAVLRRIKRAAMQSELI
DSNKAKSDGWTNSEDEEEDS
GDNDYEEFDGLDEIKRIHRR
SSWKLCFKQPASEYLKFRET
LDR--LKVALENVMLRNDLG
-------RMNGTIKVANIAY
EKSV------FVRISDDRWS
TFRDRPAKYQCSPSKAFDTF
RFDFDIPR----NDKSDSRI
EFCICYKANNT-------EY
WDSNDGHNFVLTPDEPFPLL
ISS----SQHFKDIKNYTFF
FSSSATQQGSKSPVVRFGEM
GRKSPVVRFGEMGRKSPVVR
FGEMGSLQRLSSNALVNRSS
EWSREDHLFDANALEEQESA
EKMTEELQSFV---------
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>TS_TRISPI_Contig6.a.SN.21_T_spiralis.071204.pep_
--------------------
--------------------
----------------MSMD
NGSVLLKSPITMDPSQALRN
LNDRSLSESE------KINL
MLAREGKVEIDDWRRRWAEL
MAASGFAP---------SAG
NKNPNNTNDSS---------
----------------KSNN
KKKKKKVTFADCQGHQLATV
KVMTEPS-------DVPPRL
SASVLRAHGIPVSENDEEDM
VDGRKS--------------
---------------AAQNP
ASWHLGFTQPASQYAAFRRK
TNE--QQVALENVMLDDRCS
-------KLTGTVKVKNISF
EKTV------LIRYTTDNWQ
SYYDKPATFQRSAGDL-DTF
QFQFNMPANEPASIHPHDTV
QFCVCYKTGDADS-----DN
VDGAKHSDAFLLNMSHWGEF
AS----------------WQ
HLCDDRPYW-----------
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>TS_TRISPI_Contig4855.SNAP.1_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
-----------MKDVDGQRV
SAFEVTNND----------G
SIFLLYEILIGQSSSSSSSN
SSNS----------------
SISSSSSSSSS---------
----------------SSII
PACRRQLLASDSPGMCRRVA
T-------------------
-----FPLASRGVFVKPSVL
KDRSLS--------------
------------------ES
EKINLMLAREGKVEIDDWRR
RWA--ELMAASGFAPSAGNK
-------NPNNTNDSS-KSN
NKKK------KKKVTFADCQ
GHQLATVKVMTEPSDV--PP
RLSASVLRAHGIPVSENDEE
DMVDGRKSAAQN-----PAS
WHLGLYPTGVPVRGFQAQDQ
RT----------------AS
GLWKT---------------
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>Sjc_0109740_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
MSDTRHLNSEQRTPIDFSGS
VSTDINTETN------TTTN
QRPHVSTWVYIKWFIWSTIA
SIFG----------------
--CSIPVFTTP---------
------------------YD
KTWPTTSILADHIKYESDNL
N---------------TVEN
NDDAYSSSSIQLNEVNSTYT
TKNSIT--------------
---------------QFSSN
YTIESDLITETKISHSFQNH
IHE--NELKLDSFNDINGNI
-------SSSSPSSSLINGY
LCDFNQT-LNCKTITETELL
SFSTTLFTDSEYLHKNSDPV
TFTLLDVCHSDSVKGIIDKV
TYDNQIHDLIN-------SV
LPRNLSNSSDISVEARKMYA
WN------KPTAIEPQTSIN
ECNLEEGSLLSGDASASPGQ
YNLSDHSYPPLSPSTLGEDS
LQAGCFDKSPTIDLNLPDIS
RSDQTLAWAMSNLGINNSSI
EIYTDTNESIHNKQIEDLSP
TDETIDFIENVDNTCSISSR
PPVPNSLHRPSRDRSPANCT
SIQ-----------------
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------SNRTRNSTDLSTFL
PYDGDQLFLVNDKGETPETV
KPKRSSSLKSNRILS-----
--------------------
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------------------DA
HVQKAVRFADALGLDLATER
HVFDSEAPPKIPASATLDLR
LDSDESIARIGAKQFGLCFS
QPGLASNFVRRVLAGNVCLE
DCHIDMQHSILTGTIRVKSM
GYEKRVIIRITYNNWITFFD
TSASYVQGSYDGVTDKFSFS
LIFPDTMVPGDKAQFAIRYE
THTGEQFWDNNHGQNYCVTC
YAKATDLAGDGSWMHYL---
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>Smp_153700_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------MNDTHLELLMSD
TSHQNSELKTSTGHSGSEST
ISSDINTEPR------TSTS
PRPHVSTWVYIKWFIWSTIA
SIFG----------------
--CSIPVFTPY---------
-------------------D
NTWPTTSILIDHNKFESDDS
N------------LHENIDD
AYNTQVLHEVNGVCTTKNAI
SCLSST--------------
---------CDFEVDVKTET
KKLALSFQNHIPENEIKLDS
SFK--DVTDNNNNNNNNNNN
-------NSYNNISSLTNGY
FCDINQT-LNCKPLTDTEVI
PISTALFTDPGYLCTESSPL
TFTLLDSYQSDSVNGFIDKV
TRDNYVHNLLN-------SV
LPRNLSNSSDISVPVEVRKM
YAWNKPTPIKSETPIDNHVT
EYNFEVGSILSDDINASPGQ
LNSSDHSYPLLSPNTLEDDS
LQAECFDKSPEIYLNLPDVS
RSDQTLAWAMSNLCIDNTTN
EIDTDSSEILSNKHTEDLSP
SSETASSIEKVDKSSNISSR
PPVPNSLQRPSRDRSPVCHT
NIN-----------------
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------NNRKKNSADLSTFL
PYEGNQAFSVKDIVETPETT
KPKRSSSLKSNRSLS-----
--------------------
--------------------
--------------------
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------------------DT
YVPKAVRFADALGLDLATER
HVYDSEAPPKIPASAISHLQ
LDSDESIAKIGAKQFGLCFS
QPGLASNFIRRVLTSNVCLE
DCHIDMQRCILTGTIRVKSF
GYEKHVTIRITYNNWITFFD
TSASYIQGSYDGVTDKFSFS
LIFPDTMVPGDKAQFAIRYE
THTGEQFWDNNHGQNYCVTC
YAKATDLAGDGSWMHYL---
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>Sjc_0045190_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
-----------MCKX-----
------------------XX
XNRFCEHEHEIMLNAKYDSY
ECFN----------------
-FGSTKEKDTH---------
-------------------S
KRSKFQLFYGDEHIDSEYIQ
KTN-----------------
-----ILHDNDKMIKSSKQL
DNLDN---------------
-----------------EWH
YVWSLTFSQPASRYYEFRQK
LEK--NIVSLENISITQSTD
QSISSYIKLSGTIKVKNVCY
EKLI------HLRLTKDNWH
TFNDYQATYSSQLSPGTWST
PRRYDTFLFN--ITIHSNNQ
HFDINEKIDLLX------KL
RSLCINMNLDSILNSPSSNK
LIS------SNNELLTIDKS
LNINQDNSTTEYNITSYTLD
CRPNFDGFTSFTHYRAWNHF
SGETNYY-------------
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>Sjc_0312750_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
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----QITTFTDEPHNETLIM
K-------------------
---------ITNPVETDYEH
SSLNDN--------------
--------------------
--LTVSVNHTLNKPLTGSLT
TNN--SGKLPKSVSFADEVG
---------KSLTEIFILCD
DDI-------YDGFSEYDSY
ECFNFGSTKEKDTHSKRSKF
QLFYGDEHIDSEYIQKTNIL
HDNDKMIKSSK---------
QLDNSDNEWHYVWSLTFSQP
ASR------------YYEFR
QKLE----------------
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>Smp_167660_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
-----MGTLVGLRYNLGSKC
TGSLGELN--------NCGY
SSNTSEDYIQQSWDTELNNL
SFPS----------------
-WMSKSNQTMG---------
-------------------L
DERSLKTSFMSSLILDMQDF
S-------------------
-----KTDIFTETSNSHNSA
NLLSLT--------------
----------------QLLG
LSCLMNFIMCKSRQTNTNAE
LVG--NVHSFTDYIFAQSQL
ERKARRRSHYPILKTFSYSN
SLNAS----LTSLVEADHVH
SKWDKLGTYFTKRRRRRHYN
SESGLSSPEDNLSSLLLQDV
ENTENKNDDEEDK-----QS
LSTNITTSIHLEEAQNISST
SLDMKTNNFGGTETSDEMAC
SRCQSEDNCLSLINRQNELL
TVNTNENDAQFSLSAEYQNP
TCINKLEIEIPLENITNSTE
SDDGHSLLHVDSFKPVNNIV
NKPITRSLTSKSNIKIN---
--------------------
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-----------------KSV
SFADEVGKSLTEIFTLCDDN
ELYNGFSASRYYEFRQKLEK
DYISLENISIIQSTNHPYTS
SIKLKGTIKIKNICYEKLVF
LRLTKNNWKTFNDYQAVYNS
QLSLYNTWSNIKRYDTFIFN
IHIESDQKYFDPNDKIEFAI
CFTALNHDHNHNNKIEYWDN
NNHENYIIEQRKLRPIFMNM
INIEQSQSSDDILLLSLYNY
DNHHLLINEDSN--------
--------------------
--------------------
--------------------
--------------------
--------------------
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--------------------
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--------------------
--------------------
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-------------------
>Sjc_0115210_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
-----MGTLVGQRCNLENNY
TGSLGELNN--------CGY
SLNSCEKLTEQNWDSESNNL
SFSY----------------
-WMSKSNQTLD---------
-------------------L
DNKSLNSSFMNSLALEMQDL
S-------------------
-----KTDIFTETSNNHHAT
NLTSLT--------------
----------------QLLG
LSRLMNFIMYKSRKTDTNNE
LTENVHQCSFTDYVFAQSQL
ERKARRRRHYPTLQTFSHSD
SLDTSLASITEHTFTDFDVH
SNLNTFETYFTGRCRRRHCN
SESGLFLPEANLSSISLQDN
EITNIECNNDDK------QC
SSNNITTSSHSEETQNNLST
NLD-------LNTNNTENVN
TGCESEEDYPSPVNRQNESL
ITTTIENDDQFSLSTENQIT
TLTDEPHNETLIMKITNPVE
TDNEHSSLNDNLTVSVNHTL
KKPLTGSLTTNNSGKLP---
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-----------------KSV
SFADEVGKSLTEIFILCDDD
IYDGFSGIILICFFVHIAFH
FPTRNHFKPRDRNLNFYILN
--------------------
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