>Minc18953_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------MKKGED
SVHELLTFIKERASMEDDIL
KCLNRQLIKASTYTTNNGSL
ADA-WRLTKNALEFWIEIKT
KLVHNLGDLSRDVFRYQ---
-EELIKIRKK----------
--------------------
----------AKDIETLEAI
NLMQTTTTCLQKAKETYLQR
CAEVINLKNS----------
SKDWTSTNTKEYLKLSF---
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
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------------
>Mh10g200708_Contig512_51429..55785_M_hapla.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------MIVDYSAH----
-------------------F
WGDKHIGYNVLYDHMKKGED
SVHELLTFIKERISMEDDIL
KCLGRHLNKANTYTANNGSL
VDA-WRLTKNTLEFWIEIKT
KMVHNLGDLSRDVFRYQ---
-EELIKIRKK----------
--------------------
----------AKDIETLEAI
NLMQTTTTCLQKIRNKLNKS
HIEYRQYMEKYAQIRDIFEE
RILKAARMFQEHDRGHILQM
KKFFLQLATLLETKHNSNAK
TTIEYRQNLELIDIEEIMLK
FIEEKGTGTDIPKKLNWTEA
DE------LPQELDVLSAVH
SHSSSSNNSSAIVAPNTTFS
SVNVQHPPPTAVNDLLSLDD
QWGSSTGTN-----------
--LFESAKSSSQRKSQ----
--------QQKMQRFKQSAS
EADEEDSDSNSENTENGQQT
NIRINTSDNQQQQQSSSIST
VQQQISSWLGRQKQAASHWR
LKKHSASQSSLPAAVANEMA
ITNEKLQSNNHFAEFSKSCG
VNEGKGGGGSGLSKRYQKKI
---NVKNSNNEITQTKMKRA
QFQLEGENCDISAEEPKIKD
PLQIFGPPPPLPIAEPPPPL
F-------------------
--------------------
--------------------
--DNNQFNSSPNFQNVSSFI
FSDEKQQNIPNYNISHNTHW
SADSSSSDDEDNSTQFQTTK
IRQLQIRPLDEHQEFHKNTS
LDELRSAIGQIGLPKSSTID
NDPWAASDAETTTSADISIQ
SNQ-----I-----------
------TSQVIPPLRAALTG
DSQYRRCFAPSND-------
--------------------
---------FGQSFSIFSTS
NSIARARPRSHTPLIFGPTS
SNIFSKPQMTQIPLNQNINS
TSNIE---------------
SKLNTKVSSTINPSPTSISD
LKLPIALATNDCIHCWIKKD
FKP----------EIRIFGT
ILLSLPSAALQILQNSSLNS
P-LKFTFK-CAQIKSLIPNQ
LFGLT---------------
---------------SNNIP
SLDNCYNFSIEREKLRDFLQ
DQQIKFPMASYHNTDLMHYE
LFENI---------------
--------------NNLLPI
SLRSFWSKIEDSNWKIRIEY
QLKEFSLKNISFTTKLTTTK
NLNEQKQFLII---NSEPEA
KLDSKNNIIWEFNELS----
--------------------
-KNCNGILNCEINSKEL---
----LLPSNTFVQFQAPNNT
ISNAEIILND-NINYMLSVF
RCKFISGKYFCEPEII----
--------------------
--------------------
------------
>14977.m05036_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
----MVATAVDYTEHFWDLI
IFCQNLRIELNYLIGTICQ-
--------------------
-GEKHHGYHVLYENLKHEEE
SVQELAQFIKERAAYEEEWN
KFLNKCIAKTNGLTAPGSMF
ANA-WLVTKNTVELLTEIQA
SFYITLQHLLKDVFKYH---
-DDLVRSRKK----------
--------------------
----------MKEQDVVDAV
NLMQTTTTCLQKSKETYAQR
VNELERLKKE-NATPKDISK
AES-KLNKSHDEYKGYVDK-
--YGRIRADFEEKMIKATR-
---------LFQAHDQSFLL
QMKT-------FMAIFARAL
DE------SASATSQVCALY
RDSVDNLDIDEMLIKFVETK
GTGKDRPEFAVFEEIDIAKD
INPSD---------------
---VLAPYSSDLSTSV----
--------HRSAPVDRHPST
AHNLMTLDTNTFDAWNNEIS
ALKVQPSPVASD--------
--------------------
--------------------
------------SSSSTAAN
IGSGSVPFSASLGRQKLSLW
---LPGKRKKYASQSSLPVS
EPPHQEFSHSQSESLGFLKK
YRCKHKKSNTDITAPNTDGP
A-------------------
--------------------
--------------------
--TEDSKSTASSSKSEEKPF
IATNGSLNILDVPVVVPPPL
PTVPPPGNNDDEGAGDNFNR
SRWSSCTE---SSDDDEDLR
QAAKLRHINIKPLIESKDNI
TASVDELRDAIGNIDPWSSI
RRSTPFNAG-----------
------LEGTVRPLRAALTG
DDHVRGKHSDSYN-------
--------------------
---------SSLSFSSSMSS
SNVARARPHSSTPTPGISSL
TLQTCDHSSVRSGEVGSTGN
QTFSGSESALSLEHS-MATG
IPFKISALNLSASATIKENR
IPIAMAINEYIHAWFRGTDL
AKT----------TVRAFGS
ILVSFPASVVPVLTDLTSDI
DPLIVTLKNADKIKAISPNS
QLIS----------------
----------------QVID
AFAAPYTFAFEKSRLAEWLS
ARKIEKPDSQFFNAEVLTYE
IKEP----------------
---------------TVPPI
VLIVYW-KLEAQNTDLRIDY
RLNMDSNINCSLANVVFTTK
VEGSVVSVIA-----DPNAE
WSPSSNTISWKLAELS----
-------------------R
DGECGGSLKARLSLSGG---
----PATVSQTFVQFQVSNV
TISGAEITITSDDLYHLSLV
RRNVFSGKYFCDAEMRS---
--------------------
--------------------
------------
>F56D12.6a_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-----MTAEGLLYADH----
-------------------F
WGDKHHGFQVLQENLKKSEE
TVAEVAQFVKERLSVEDEYV
KAIN-RSVNKVSHYIQNGSS
IDAMWLLTKGTMELMAEIHV
MLVKNLQDLSREVLKYK---
-EDVNRTRKE----------
--------------------
----------LKQPQVAEAV
NLMQTTTTCLQKAKETYQHR
CQELEKVKKETNVNVKEISK
VEL-KVARAREEYKSYVDK-
--YELVREDFETKMSDSCK-
---------KFQTFDRSLYA
SIQQ-------FMLLFANHS
TE------MSSASHQVAEQF
KESIQHLNADEFVRKFVKTK
STGTEKPPRVLFEESENGQL
PASSSSMNLN----------
--PVRDLVDIMSGNSM----
--------PSSCSSSGILQD
QAPPPHPTTVDLLMMDPIGE
GIPVVDSSINSN--------
--------------------
--------------------
--------YSTPPIINNSIP
ESIKKSSEDLSEKKGGKKLS
---MFIPKRRTKTVSTSSID
ETPTTAEPFSASGLFKFTRE
KRRSKKENEANLRAS----V
C-------------------
--------------------
--------------------
--MDDTHSTASSSKSDDKML
NGSAPAHSLLDAPIDEKPKN
LPVVDDEGYIVRTTTTSENN
ADSSNPTAWSSCSSDEEEDE
DELQKSRIRKMTISDRPVHI
NASVDELRDAIGSITLTRST
TFERDPWTIGGTKAPLMFSQ
---SMNVSSLRQPLRSHHTA
DGRFRTNFSESEDPPAF---
--------------------
---------SVSMGHNQAMA
AGIARARPRSNTPTTSQMMS
RKDSASSFMDPWSSTFNLAP
SESNHSLG----------ES
TFNLSQSTGNLLQATISEQR
IPLAMAINEHVHVWFKKG-A
EEF----------IQRTFGT
VMISFPTSSITLLTSIQHEI
EPLAFRLSNAKFIKSVLPNK
QLID----------------
---------------ENVSK
KDDEMCIFYFNKTHLATWLQ
AQKLAKPDAAFVNAEVARFE
MEPTAPC-------------
--------------NMVPPL
FLTSYW-KFEPGHTDLRVDY
RLNSESSISAPLLNVNFSTN
LTGSVDSVMC-----EPEAK
WVAGNPSLGWNLLEISR---
------------------NG
DVHGSLKARIFMKNSGDEVS
LEMLDRKPAQVFVQFQCLEA
NLSGVDISLVQSDIYHLSMI
RKKVLAGKYFCDPELRK---
--------------------
--------------------
------------
>Smp_028140_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
-------MSSCLFSQH----
-------------------F
WGEKHSGFDAMYQNFKLCYR
TSSEFAEFLRESYTAEDNYY
KTLV-KLSKQAGSYNNTSSF
KPC-WSLLKQFIDQISQVHL
TIAQERQNLSRDVQKYL---
-EEQHKRQKL----------
--------------------
--------IKDTEASTQEVV
HAFQVTSVQLQKAKEAYHSR
YNEYERSMRLESGSNRDQEK
LEV-KLKKAQDEYKYSVEK-
--YNNLRNQFVSKMHISCA-
---------QFEEIEVAHLE
QMKE-------FLHRYASVW
SI------TGDALGKLHNQF
DRDLTELTTDRLLNILVTER
GTGTSEPQGVQFEDAEVAAA
FSSNATERANGITANGVRAL
EAFFAREARAASALAI----
--------VGSGTKDNGESS
LNSLTDVRSDAVSVTSISVG
VVPSVTNISISGNGTAKRRE
GFFRRRRNSLSQDPAPAIGD
NNATGSSTSVGAAIGTNTNI
QASGSISLSAFTVVAKRGIR
RLGTPYSNGKDKPIKQMDKS
---DNITSKSDDWRTTTPVE
LPKDEDGYNIRPPDPWGENS
SNFNHSEADDSGSEEDLESK
ANKTFHGLKVNIRPVGEFAP
GVALKYNGDKLESRPKPVET
RSPKSTGNSQVPLLIDHRVG
STLRSPRSSISSYQNIPITS
GSDSVSNHDLINALPLPPLL
PPPPPPPSSSVSSSTTESFT
SIGAGGSMRTRNVGLSSFNT
LSKGHSISAIRPRGYSCNTW
TKKGNSSQLNSAKSLESKDE
TKNATFSLSSFETLFTVQET
NTKDIQSNNSKDSVQKDCSS
DFKFGFKDSDSCNSLIDTLQ
RISSSAMGVNLSPVKNDGDG
GLVRRCSSTAPTSMDNESID
QSNWMAFETNSTETSKSFSP
SVPWPSFNANIHGTVVGKEA
RPIPEPPTRLHNHPN-NSSI
IEPCITPSPSTYSINSPNNS
ICLAAAFTEIWHARFFNGGG
SSFSTAASTGQPPIQAINGS
LTLAFPRVDMGQRLFNKLLI
PPLVFRITNAERLKDLQPKL
SGSSISLFSESTTPTADKPQ
PILLENLADNNATQIINSCN
NNSSDYMLAIPGDVLSSYLA
PLIIAHSDENSFSCSDTSDK
LNTSFTSNTP-TYVKLDVLT
YTVDVNADVKGYYPSLTPPI
HLCTYW-RCEASTTDFRLDY
TAQWPTPTTAKELVKNTGDL
RINLMIDGTVSHMQSLPVGT
WLPEVNHATWRIPLHNTNID
RNLSRDNNSNS-AHRSEFTS
KFDATGTVRAKFTLTNG---
----PGKPQPVSLQFYREGS
LASGVQLFVI-SSDYRMNLC
KYRLIGDRYICDPPTNVNRF
HSNSTLHLEQNNNNTI-FNS
LVITENKNIKNKNDDINEHK
INPTSLSSITDT
>Sjc_0069410_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MYQNFKLSYR
NSSEFADFLRESYSAEDNYY
KTLV-KLSKQAGSYNSTSSF
KPY-WSLLKQFLDQISQVHL
NIAQERQNLSRDVQKYL---
-EEQHKRQKL----------
--------------------
--------IKDTEASTQEVV
HAFQVTSVQLQKAKEAYHSR
YNEYERAMRLESGSNRDQEK
LEV-KLKKAQDEYKYSVEK-
--YNNLRNQFVSKMHISCA-
---------QFEEIEVSHLE
QMRE-------FLHRYASVW
SV------TGDALEKLHNQF
DHDLAELTTDRLLNILVSEK
GTGTMEPQSVQFEDPEVAAA
FSSNGNERANGLTGNSVRVF
DAFLNREGRAASALASNLQY
QFYNKNNLWVLVSKIMGEPS
LNSLTDVKSDAVSLASISVG
VAPSGHLLQLAQLLEQMRSI
QTSGGS--------------
--------------------
------SLSAFTGGAKRGIR
RLGTPYSNGKDKPAKQLEKS
GRFDTITLKSDDWRTTTPVE
LPKDEDGYNIRPYDPWGENL
THLDHSEVDDSDSEEDLENE
VNKTFHGLKVSIRPVGEFAP
GVALKYNGDKLESRPKFSEA
IKSKNAGNSQGPLLIDHRVG
STLRSPRSSISSHQNIPITV
GSSGVSSQDLIN---ALPLP
PLLPPPPSVSFSTSEPFPPL
LDVGGGSVRVRSSGASSFNA
LDKYHSISAMRPRGYSCNTW
TKNVSSNQLSSVRSFESRGD
NNNNTAFNLSSFDSLFTTQE
TKTN-KLHDIDESIQKKCPS
DFVFCLNDSVSCDRLVDTLQ
RSSSSVVCVDSSPVNNS-DG
SIVRRCSSTAPTSTDDESIN
QSNWMSFETNATGTRKS-SP
SIPWPSFNANIQGSVVSKEG
RAIPEPPARLHSHLINSLMT
EPAITPSPSVHSFSSPNNNA
VCLAAAFTETWHARFFNGGG
SSFSTAAFTCQPPIQAINGS
LTLAFPRVDIERKIFNKLPV
APLILRITNAERLRDLQPKL
SGSSISLFSECTTPTDTLRS
SFLEN-----LPDNVGSEIN
DDCSDYVLTIPGDVLSCYLA
PSIMSYSEENSFSCSNTPSD
RLNTFSSSTTRTYIKLDVLT
YTVDVNANINGSYPALTPPI
HLCTYW-RCEAFTTDFRLDY
TAQWPTIVAAKEPMKNTGDL
RINLMVDGAVSHMQSLPVGA
WLPEFSYATWRIPLHNGNIN
DRDLSRDNITNNSYRSEFTS
KFDATGTVRAKFTLTNG---
----PGKPQPVSLQFFCDGT
LASGVQLTVISSLDYHMKLC
KYRLIGDRYVCDPPTNVNRF
HSNSTLQLEQNNNIKERFNN
SLVVDLYCVNKLKLELNDLA
PYLFCILSQKSG
>TS_TRISPI_Contig15.SNAP.194_T_spiralis.071204.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
----------MTDAAALKAF
ASV-WHTIKLYVRRMTELQQ
GLASKFGELLRDVQKFG---
-DEQLKLHKS----------
--------------------
--------VKEREAKTFEAM
NLIQTTTTCLQKAKETYYVR
CEELERLKRE-SASNKDINK
CES-RMKKARGEYKQYVEK-
--YENVRVDFENRMTMAAKN
----------FQTIQVDHLN
QMKQFIVLYSTALANYYQSL
TKGIWDCLAWFVDKGITEEF
SSEMFNLDVSAILTEIVKLK
ATGTDRPGKRRNAFDDLVRQ
PME-----------------
---FKELRSTDLLTIS----
--------SKSAQETASSEC
SDVLQAGNTNVAKSDRSPSQ
SSTRRLADLFIP--------
--------------------
--------------------
-----------AGYRDRGSG
TSSSSSTNSSPLPSTVAAAG
----SLTTSQLKPKLTMWLP
GRRSGTKNIGVPSSRTFDNV
SLPSKMSASDK---------
--------------------
--------------------
--------------------
----KVKYIYYNGSLLYAVI
ETETSPS-------------
-QINPLFHG-----------
--------------------
--------------------
--------------------
--------------------
---------LFNTTSSVKTG
DTSLESADLETQP-------
--------------------
-------------KRTLSMA
FLKKKSREKKKSVESSNFSD
TKMEEKVN------------
--------------------
------MDFQPDVEIDNPAA
LQHSSFMDSSSDTDSGGTDT
FPR---------------KI
TVEIKPAKGDRLMASASVDE
LREAVGLMTGTSASSVKQTG
NVAS----------------
-----------------VHD
MEFNMFNDSTNKSKGVKVLR
AAKTGDDKWNNLAFAGSEYR
LRPRS---------------
----------------TTPT
HMIALQ---QPTLKNVVKVY
KNNAVSVATPENIPASANDA
SDRTEISTVQS---------
--------------------
--------------------
--------DLTLSSLSG---
-----TIPLAMAIIETIHAL
FKANNE--------------
--------------------
--------------------
--------------------
------------
