>Sjc_0054700_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
-------MRCKLASVYRLVD
IFGWNTGINNHITARVTR-D
TDEYLINPTGLLYNELTASS
LVKINLKGSILAQGSVDLGI
DKQNWMLHAAVHSARPDVRC
IIHLSTPAAVA---------
-----------------VSC
TNAGLLPISQEAMILGETAV
YDPLVTLNNQQN-GEEDSDS
RKERHFDAQKAEISRIFSEK
--------------------
----SSTCMVLLVRSYGLLA
LGQSVEEAWFVAFTSMLACE
AQLR----------------
--------------------
--------LASIS--LDELV
IPTKE----AQEAAHLVGRT
PSAVQLRVG-----------
--------------------
----EIAGSSGWRRGELEFE
ALMRRLDSAGYHTGYVYRLN
QIRQGSTAAS----------
--------------------
---------TLHRPPT----
---DFVDGASTQQSA-----
LSPRDAAAHVRRAASLGRG-
--------------------
--------------------
--------------------
------------------LK
DVEIPPTVSSFATSYYEDEE
SRAATIAEMKAKTLS-----
--------------------
--------------------
--------------------
------LSRAHWLSTPNAYL
REEIEEVGTPN---------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------------------
--------PKKITHWTEGSD
--------------------
LSKTHTSGMAMPLVNPNQFA
LQGSDPQEFKNQQKKVIFQT
KKQ----------
>Smp_071140_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
----------------MAVD
VHKEVSRTKFIDRIDVNNED
YTRELLRPPDIKED-VKLMQ
ERSRVSLILRSAY-------
--------------------
-----FRKELEKIVASSLKS
GCLN---ANVIALKQIIEYL
TPQTRLGSSAFTRG------
--ATVPVVPINDLRTAQLGS
YVKGERLIRCKLASVYRLVD
IFGWNTGINNHITARVSR-D
TDEYLINPIGLLYNELTASS
FVKINLEGSILVQGSVDLGI
DRQSWMLHAAVHSARPDVRC
IIHLSTSAAVA---------
-----------------VSC
TNAGLLPISQEAMILGETAV
YDPLIVLNNLQQNGEEDLDS
RKKRHFDAQKAEISRIFLER
--------------------
----SPSCMVLLVRSYGLLA
LGQSIEEAWFIAFTSMLACE
AQLR----------------
--------------------
--------LASIS--LDELV
IPTKE----AQEAAHSVGRT
PSAVQLRVG-----------
--------------------
----EVTGSSGWRRGELEFE
ALMRRLDSAGYHTGYVYRLS
QVRQGSTAASTLQRPPADLL
DNNSTQQSRDAAAHVRRATS
LGRGLRGLKDVEIPPTVSSF
ATSYYGDEESRATAI-----
AEMKAKTLSLSRAHWLSTPN
AYLREEIEEVGTPNPKKITH
WTEG----------------
------------------SD
TNKTRTGGVAVPLVDPNQFA
LQGSDPQEFKNQQKKVKDKY
YKDVRSAGPKSRILQGIDLE
DES-----------------
--------------------
--DETDGGIASPKVVSPKGT
LLRLDPSNPPSLEPGHVVVV
GAASKGIINRNQRHNVGVYQ
SVYSPNP-----FDRMTDED
LERYKENVER----------
--------------------
---------KAKGLPSLEEE
EAR-----------------
--------------------
--------------------
--------------------
--------------------
--ARIEEARQAVVVAREAME
AASRMGS-------------
EQNYHGEPSLDVSRIHAVRS
--------------------
-DTSGAEASHDDTEKETRKD
DSILERKKKRRFKMPSFARK
SKIKESKEKK---
>Smp_014670.2_Smansoni.v4h.longest_isoform.pep_
--------------------
--------------------
-----MPDSNVAN-------
--------------------
-------------------G
VVLSDKPDKFIDKIDPEDPE
YQKSLMRPACIKED-VNLMI
QRQRVSGILKSDA-------
--------------------
-----FRRELEEVIRSQCQS
GDYPGMNTSLLSLQHISDLF
TSAPSGKPLGGGGFSRG---
--HRNGVIPINDLRGGDATV
YSRRERSLRCKLASVYRLID
LFGWNSSIYNHVTVCVSR-N
HEHYLVNPFGLLYHEITASS
LIKVDSKGQILDPGSTILGV
NQVTWALHSAVHSARADIRC
IIHLDTPSTVA---------
-----------------ISC
MKSGLLPLCNEAMILGEVAY
YTPSGGLSCRTN-ADANGDF
GDIKDWAAECATVSEALG--
--------------------
-----PTARILFLRSLGLLA
LGETIEEAWHYATNAIVACD
TQLL----------------
--------------------
--------LASVS--AENLI
LPTDK----LKQKTYETWRT
AGLGGLSGPEAALAMRLSSP
NKSGTSETGQHSVTNGFIPD
GSNVESNLARPWRLGELEFE
AMMRHLDNAGCRTGHLYRQE
AMASPHRSRKSKVVNG----
--------------------
HGGAGCQDDDIQVPPSASSV
TATMAYYYDDGVLSGDETET
PRPSTLRREFSDKQWFNTPN
KYTKEVIEPAPGHQPVPHWV
CEREAAVHNAVCNG------
-ALPPPAPFHPLTHGAVPLG
STGGPATGTSSVMSPYNVFA
PQGSNPKEYREQQKKVKAKY
YHDTNTAGPQSRLLDGLTWD
EAR-----------------
--------------------
---RVRDEGLVKVLGPRAAA
LVAGGITSEMPVAAASKAII
QRDIRNAAVIYDGLYSHQN-
-----------PFEKITDEE
LEMYRREIELK---------
--------------------
---------NNPDLVAEMDH
LTG-----------------
--------------------
--------------------
--------------------
--------------QNASFE
APSSTAHLIDSLAVDSGATD
LESASELGPTIHS------L
SELSPSVHNARVGEIRHSET
--------YPIDSPVTGRLA
PPPTTGTLTSQPSGTEDMSE
NDGKHKKKKRRFKLPSFSLK
PKD-----KSKSK
>Sjc_0024050_Sjaponicum_Proteins.v4.0.short_header.pep_
--------------------
--------------------
-----MPSSNVAN-------
--------------------
-------------------E
VMLSGKPEKFIDKIDPEDPD
YQKILMRPAAIKED-VNLMI
QRQRVSGILKSDA-------
--------------------
-----FRRELEEVVRSQCQS
GDYPGMSTSLLSLQHISDLF
TSAPSGQPASGG--------
--HRSGVIPINDLRGGDATV
YSRRERSLRCKLASVYRLID
LFGWNSSIYNHVTVCVSR-N
HEHYLVNPFGLLYHEITASS
LIKVDSKGQILDPGSTILGV
NQVTWALHSAVHSARADIRC
IIHLDTPSTVA---------
-----------------ISC
MKSGLLPLCNEAMILGEVAY
YTPSSGLRCKTN-FNTNGDF
SDAKDWAAECATVSEALG--
--------------------
-----PTARILFLRSFGLLA
LGETIEEAWHYATNAIVACD
TQPQ----------------
--------------------
--------LVLKSHPSYRQI
KANKRGLSGPEAALAMRLSS
PNKSGTSETG----------
--------QHGATNGFLTDG
GTNVETTLSRPWRLGELEFE
AMMRHLDNAGCRTGHLYRQE
AMASPHRPRKSRPVNG----
--------------------
HSGAGSQDEEILVPPSASSV
TATMAYYYDDGVLSGDETET
PRPSTLRREFSDKQWFNTPN
KYTKEVIEPAPGHQPVSHWV
CEREAAVYNAVCNG------
-ALPPPAPFHPLTHGAVPLG
STGGPATGTSSITSPYNVFA
PQGSNPKEYRDQQKKVKAKY
YHDTNTAGPQSRLLDGLTWD
EAR-----------------
--------------------
---RVRDEGLVKVLGPRAAA
LVAGGVASEMPVAAASKAII
QRDVRNAAVIYDGLYSHQN-
-----------PFEKITDEE
LEMYRREIELK---------
--------------------
---------NNPDLVTEMDR
HHLTG---------------
--------------------
--------------------
--------------------
--------------QTTSFE
APSTTTHLIDSLAADSGATD
LESASELGPATHSLAQFSEL
SPSVYDRKDLGVGEIRHSET
--------YPVDSPATGRLA
PPPTTGTLTSEPSGTEDMSE
SDGKHKKKKRRFKLPSFSLK
TKD-----KSKNK
>15168.m00058_BMA1.short_headers.longest_isoform.pep_
--------------------
--------------------
-----MPSKTDGASNG----
--------------------
--------------------
-----TAERSFVNFDPEDPE
YIKELQRPAAIKED-LSEME
RRKRVQEVLESKS-------
--------------------
-----FCRELEELIKQESES
HKSD--PDHLKTLQRLSELT
LPHGQIATSSLHN-------
-IGVGAVLPIADLKGSGS--
YTRAEKMFRNKLASLYRLVD
LFQWSQGIYNHITLKLP--D
SDELLINPFGLLYHEITASS
LIKINLNGEIIDRGSTKLGI
NQAGYVLHAAIHKARPDVRC
VLHMHTAVVSA---------
-----------------ISS
MKCGLLPLSQEAMIIGPVGY
HDYQGILDDES---------
--------EMESIVKDLG--
--------------------
------DKNVMLLRSHGFVA
CGESVEDALHLAFNTVIACE
TQACLAFFFTRVPLVVFILR
TNGYLVCCETVEEAVYVIRN
LVTACDHQIRAARAGIENLV
IPNEKAVERVYKTARKGGGG
VDRNGAKDAE----------
--------------------
------GKQINWRIGELEWE
AWMRVLDNAGYRTGHIYRQP
LFRSRALPSSTNNQN-----
--------------------
---------DVAVPPSASSI
G--TVDETDYESVTA-----
HKMALLRKEQERSRWLNSPN
AYQKIEXLETGTNNPKRITK
--------------------
----------------WVQD
VSSPSQSGTPVKISSPHQFS
PFSSNPKEFKEKQKAIKENR
RLGTTSAGPQSQILDGVTYE
EIAQIRADAETSDMG-----
----------------QADR
VVMIGTASKGIIDRQHQHNA
QVYRQLYAPNPFASETDEDI
QKYMKEVEAKTPRPSSAA--
-------------DSTEHTT
SSPPLYENDS----------
--------------------
---------PSVETISLMQA
AR------------------
--------------------
--------------------
--------------------
--------------------
--EHRTRPTFSGMASASIDE
--------------------
-EGAPTEISVGTHSSPVAQP
--------------------
-STGRDSPKLKRSMQKEVVR
SKLCLNMKGLKIWEPVLILR
CL-----------
>F39C12.2b_wormpep204.longest_isoform.pep_
--------------------
--------------------
--------------------
--------------------
-------------------M
IGRKEKERERPYYRDPDDPE
YIKDLQRPAVIKED-LSEME
RRKRVQQILESKS-------
--------------------
-----FCHELEEVIRQECDT
ARTDP--DHLQVLQKLSDLT
VPQGNMSFGNLHTYG-----
----GNTIAIADLRGNEK--
YSKAERIQRNKLACLFRLAD
LFQWSQGIHNEISYRTND-E
DNTFLMNPFGLLYHEITAAT
IVKIDENGKILDCGTLKAGV
NQPAFLLHSAIYKAHPMVRC
ILHMHTAIVAA---------
-----------------VAS
MKCGLLPLCKEAMVLGPVGY
HDYQDIGDDDI---------
--------QFDEIIANLG--
--------------------
------DKNVLFLRNQGFLV
VGDTIEHATFLANNTVIACE
TQVR----------------
--------------------
----------AARAGLDNLI
IPEEK----AIQRAFRNSRN
TNSLKRNG------------
--------------------
--------TVDWRVGELEWE
SWMRVLDHANFQTGHVYRQP
QLRPKSAMSTSMVNNN----
--------------------
---------DVAVPPTTSAY
G--QIDETNLESVSA-----
HRLALLRKEQERVRWMNSPN
AYQKVEFLEYGADNPKKITK
--------------------
----------------WVHD
VNVPSASGTPVKISSVHQFS
PASSNPKEFKEKQKAIKENN
RLGTLSAGPQSQILDSVTYE
DIALLIKPDNDGTVGQS---
---------------STADR
AILIGTASKGIIDRQFQHHA
QVYHQIYAPNPFSVETDADI
KKYVDMVKAKNSQSAPVSAR
SG-------YSQYDEVEADT
VSLMQGVREHK---------
--------------------
---------LSQAALSASDD
GLNAG---------------
--------------------
--------------------
--------------------
--------------------
ISPNNVRTSEESVNTSYMSQ
SVVFDCDHPS----------
PMSISTEYPEKVKMTRFSST
--------------------
QGTSEGNTTSRSCTTASEEE
KPTKDEKKKKKKGFLSFMRK
KDK----------
>TS_TRISPI_Contig30.SNAP.13_T_spiralis.071204.pep_
--------------------
--------------------
-----MPGKQKNSHEK----
--------------------
-----------------PSS
PVSSPCKSPERQQFNVDDPD
YIRDLQRPAVIKED-LNEME
RRKRVRQILESKA-------
--------------------
-----FREELEQLIQTERNQ
ENSE---DRLKTLERLSELI
LPQTYLKHPSLYT-------
-LKSQFVLPIADLRGSEATK
YSKQERILRNKLACLYRLID
LFQWNEGIYNHISVRLAN-E
TDAMLINPLGLFYHEITASS
LVKINMTGRIVDPGTTGLGV
NEAGYVLHSAIYQARPDIRC
VIHLHTPACAALVFFQLTLL
SFGPREQGWEKLVSTRSVAA
MKCGLLPISQEAMIIGNVSY
HDYNGIVVEDS---------
--------ERSTISCDLG--
--------------------
------ANKVMFLRNHGFVA
CGTTVAEAFHLVYNLVLACD
IQVR----------------
--------------------
----------AVRVGVDNLI
FASEDAQQKVADLTKAGGGG
VNKQSESQ------------
--------------------
-------TKINWKIGELEFE
AWMRVLDNAGFRTGHIYRHP
ISSSRPPQQHS---------
--------------------
---------DIMTPPAASSR
G--LLDETESAAMEG-----
---RMLQGRSDGNVWLNSPN
IYTRKELKETGTQEPKTYTK
--------------------
------------------WV
QEMNTSSSNPVKISSPHQFA
PISSNSKEFKEKRDMLKEAR
RVDTVSAGPQSKVLEPVTWQ
EID-----------------
--------------------
-------KLKVCVQAASSFP
FVIVEKKYDMLISYLPLFQE
AELNAVEEKVIIGAASKG--
-----------IIERDFRHN
AQIYQQLYQP----------
--------------------
---------NPFASETDEDI
KAYLK---------------
--------------------
--------------------
--------------------
--------------------
-EVEKKREFYDDHHAVEQPD
--------------------
ASPSPESVSLMLAARDHHAQ
P-------------------
YCDETPTSTGRGRVTTFDAS
SDRTTTSTANVFAYPKLISD
VCEYCA-------
>Mh10g200708_Contig0_99137..102636_M_hapla.pep_
--------------------
--------------------
-----MNGDLKQNKNS----
--------------------
--------------------
---KNEDKNKLNDFDDNNSC
DRQEKWRSPVIEED-LWDMS
RRKRVKEVLGSND-------
--------------------
-----FRSELEQIVCPDIAR
SFPEDLNSAMQCLNIQNTNY
SRLPQLLALNVNQ-------
-VLSNPPIKIADIG-RNDNL
YSLEEKQYRNKLATIYRLVD
LFQWSQGIYNHITLRLPGTD
PAQVLINPFGLLYNEVTASS
LIKLSLSGDVIDQGSTNLGV
NQAAYVLHSAIHEARPDVHC
VLHLHTAVVAA---------
--------------------
--------------------
----GILTDDE---------
--------EKKSIVSDLG--
--------------------
------DKNVMILRNHGFVA
CGQTVEDALHLAFHVIIACE
TQIR----------------
--------------------
----------AARVGIDKLI
IPSEE----AVLKAYSTARS
GGGGGVNRIQ----------
--------------------
----QNSTTISWGIGELEWE
AWCRILDTAGFCTGHIYRNK
LLRSTSQPSHHSMYN-----
--------------------
--------LSSIATPSNGPA
SLGTIEEGTSTTNWR-----
-LSLLFQKEKEKAIWLNSPC
NYLKVQLPETGTDCPRLITR
--------------------
----------------WVEQ
QSVSSKSGTPVKINSPLQFS
PSSLDMREFNEKRRKIKEAR
MSGKVSPGPQSLVLDGLTLT
DIE-----------------
--------------------
---------------GEKPR
PVYIGAASKGIVQKDQQINA
QVYRKLYSTNPFKNDYFN--
-------------NSLENYM
KEFGEGKIIK----------
--------------------
----------SQSNYSEMNG
TAN-----------------
--------------------
--------------------
--------------------
--------------------
-------DNMDILVNSQSVP
--------------------
-------ITPIHSINKNGEN
R-------------------
HSIKRINERSASTDVGMNGK
GGELLKNGKNNGIEASFKKE
VL-----------
>Minc01372_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
-------------------M
DVNKNTKNEDKNKIEDNNSC
DHQEKWRSAAIEED-LWDMS
RRKRVKEVLGSND-------
--------------------
-----FRTELEQIVCPDIAR
SFPEDLNSAMASLNIQTANY
SRLPQLLPLNVNQ-------
-VLSNPPIKIADIARNNN-L
YSSEEKQQRNKLATIYRLVD
LFQWSQGIYNHITLRLPGTD
PAQVLINPFGLLYNEVTASS
LIKLSLFGDVIDQGSTNLGV
NQAAYVLHSAIHEARPDVHC
VIHLHTAVVAA---------
-----------------VSA
MKCGLLPICQEAMIIGPVAY
HDYQGILTDDE---------
--------EKKSIVSDLG--
--------------------
------DKNVMILRNHGFVA
CGRTVEDALHLAFHTIISCE
TQIR----------------
--------------------
----------AARVGIDKLI
IPSDEAVQKAYSTARSGGGG
VNRTQQNLT-----------
--------------------
-------TNISWGIGELEWE
AWCRILDTAGFCTGHIYRNK
LLRSTSQPSHHSMYN-----
--------------------
--------LSSIATPSNGPA
SLGTIEEGTSTSSNWR----
-LSLLLQKEKEKAIWLNSPC
NYLKVQLPETGTDCPRLITR
--------------------
----------------WVEQ
QSVSSKSGTPVKINSPLQFS
PSSLDMREFREKRRKLKEAR
MSGKVSPGPQSLVLDGLTLT
DIE-----------------
--------------------
---------------GEKLR
PVYIGAASKGIVQKDQQINA
QVYRKLYSANPFKTDDHFN-
-------------NGLENYL
KKFGEGKIKK----------
--------------------
----------SQSNYCEMNG
TVN-----------------
--------------------
--------------------
--------------------
--------------------
------DTSTNIIVNSQSVP
ITPICSVKENGGGSQKIICD
KHSLIKSTERSTSDAGLNGK
G-------------------
GGGGGEYFKNGKNNGTIEAS
FKKELNGKKRRWREFFLFRR
KKSG---------
>Minc04361_MiV1A1.short_header.longest_isoform_
--------------------
--------------------
--------------------
--------------------
-------------------M
DVNKNTKNEDKNKIEDNNSC
DHQEKWRSAAIEED-LWDMS
RRKRVKEVLGSND-------
--------------------
-----FRSELEQIVCPDIAR
SFPEDLNSAMASLNIQTANY
SRLPQLLPLNVNQ-------
-VLSNPPIKIADITRNNN-L
YSLEEKQQRNKLATIYRLVD
LFQWSQGIYNHITLRLPGTD
PAQVLINPFGLLYNEVTASS
LIKLSLSGDVIDQGSTNLGV
NQAAYVLHSAIHEARPDVHC
VLHLHTAVVAA---------
-----------------VSA
MKCGLLPICQEAMIIGPVAY
HDYQGILTDDE---------
--------EKMSIISDLGDK
NVMNSSKPWFLLLVGEXXXX
XXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXLAFHTIISCE
TQIR----------------
--------------------
----------AARVGIDKLI
IPSDE----AVQKAYSTARS
AGGGGVNRTQQN--------
--------------------
-----LTANISWGIGELEWE
AWCRILDTAGFCTGLIYRNK
LLRSTSQPSHHSMYN-----
--------------------
--------LSSIATPSNGPA
SLGTIDEGTSTSSNWR----
-LSLLLQKEKEKAIWLNSPC
NYLKVQLPETGTDCPRLITR
--------------------
----------------WVEQ
QSASSKSGTPVKINSPLQFS
PSSLDMREFREKRRRLKEAR
MSGKVSPGPQSLVLDGLTLT
DIE-----------------
--------------------
---------------GEKLR
PVYIGAASKGIVQKDQQINA
QVYRKLYSANPFKNDDHFN-
-------------NGLENYL
KEFGEGKIKK----------
--------------------
----------SQNNYSEMNG
NVN-----------------
--------------------
--------------------
--------------------
--------------------
------DTSTNIIVNSQSVP
ITPIRSVQENGGGSQKIICD
KHSLIKSTERSTSDAGLNGK
--------------------
-GGGVEYFKNGKNNGTIEAS
FKKELNGKKRRWREFFLFRR
KKSG---------
